Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02853

Experiment: L-Malic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C)
3,008,052	-		MPMX20_02852	0.73	-1.2
3,008,052	-		MPMX20_02852	0.73	-1.3
3,008,081	+		MPMX20_02852	0.74	-0.6
3,008,081	+		MPMX20_02852	0.74	-2.7
3,008,089	-		MPMX20_02852	0.74	+0.7
3,008,089	-		MPMX20_02852	0.74	-1.3
3,008,089	-		MPMX20_02852	0.74	-0.4
3,008,089	-		MPMX20_02852	0.74	+1.5
3,008,089	-		MPMX20_02852	0.74	-1.8
3,008,134	-		MPMX20_02852	0.75	+0.1
3,008,147	+		MPMX20_02852	0.75	-0.4
3,008,155	-		MPMX20_02852	0.76	-0.6
3,008,183	+		MPMX20_02852	0.77	-0.4
3,008,243	-		MPMX20_02852	0.78	-1.0
3,008,251	+		MPMX20_02852	0.79	-0.5
3,008,287	-		MPMX20_02852	0.80	+0.9
3,008,295	+		MPMX20_02852	0.80	-0.4
3,008,332	-		MPMX20_02852	0.81	-0.5
3,008,344	+		MPMX20_02852	0.81	-0.6
3,008,344	+		MPMX20_02852	0.81	-1.9
3,008,344	+		MPMX20_02852	0.81	-1.9
3,008,344	+		MPMX20_02852	0.81	+0.4
3,008,344	+		MPMX20_02852	0.81	-0.2
3,008,352	-		MPMX20_02852	0.82	-0.9
3,008,352	-		MPMX20_02852	0.82	-0.7
3,008,352	-		MPMX20_02852	0.82	-1.9
3,008,352	-		MPMX20_02852	0.82	-1.3
3,008,352	-		MPMX20_02852	0.82	-0.3
3,008,352	-		MPMX20_02852	0.82	+0.8
3,008,352	-		MPMX20_02852	0.82	-1.1
3,008,352	-		MPMX20_02852	0.82	-1.3
3,008,352	-		MPMX20_02852	0.82	-0.8
3,008,352	-		MPMX20_02852	0.82	-1.3
3,008,352	-		MPMX20_02852	0.82	-0.4
3,008,352	-		MPMX20_02852	0.82	-0.2
3,008,415	+		MPMX20_02852	0.83	-1.2
3,008,427	-		MPMX20_02852	0.84	-0.7
3,008,434	+		MPMX20_02852	0.84	-0.2
3,008,434	+		MPMX20_02852	0.84	-0.8
3,008,442	-		MPMX20_02852	0.84	-2.0
3,008,442	-		MPMX20_02852	0.84	-1.3
3,008,442	-		MPMX20_02852	0.84	+0.9
3,008,460	+		MPMX20_02852	0.85	+0.2
3,008,477	+		MPMX20_02852	0.85	-1.2
3,008,477	+		MPMX20_02852	0.85	-1.6
3,008,477	+		MPMX20_02852	0.85	-3.1
3,008,485	-		MPMX20_02852	0.86	+0.1
3,008,485	-		MPMX20_02852	0.86	+1.1
3,008,485	-		MPMX20_02852	0.86	+4.6
3,008,543	+		MPMX20_02852	0.87	-0.1
3,008,548	+		MPMX20_02852	0.87	-1.4
3,008,551	-		MPMX20_02852	0.88	-1.5
3,008,556	-		MPMX20_02852	0.88	-0.7
3,008,556	-		MPMX20_02852	0.88	-0.6
3,008,601	-		MPMX20_02852	0.89	-0.7
3,008,653	-				-0.4
3,008,719	+				-0.4
3,008,733	+				-0.4
3,008,733	-				-3.1
3,008,733	-				+0.7
3,008,735	+				-0.1
3,008,746	-				-1.4
3,008,804	+				+0.2
3,008,807	+				-1.1
3,008,817	+				-0.4
3,008,825	-				+0.0
3,008,834	-				-0.9
3,008,902	-				-1.3
3,008,937	-				+0.8
3,008,942	-				+0.4
3,008,942	-				-0.1
3,009,000	+				-2.0
3,009,000	+				-0.1
3,009,022	-				-0.6
3,009,040	+				+1.2
3,009,053	+				-1.0
3,009,058	+				-0.6
3,009,058	+				-0.5
3,009,066	-				+0.5
3,009,066	-				-0.7
3,009,066	-				-3.0
3,009,066	-				+0.8
3,009,071	+				-1.0
3,009,173	-		MPMX20_02853	0.12	+1.2
3,009,204	-		MPMX20_02853	0.14	-0.4
3,009,229	+		MPMX20_02853	0.16	-0.2
3,009,234	+		MPMX20_02853	0.16	-0.9
3,009,242	+		MPMX20_02853	0.17	-1.4
3,009,247	+		MPMX20_02853	0.17	-0.5
3,009,394	+		MPMX20_02853	0.27	-0.8
3,009,399	-		MPMX20_02853	0.28	-0.5
3,009,402	-		MPMX20_02853	0.28	-1.7
3,009,402	-		MPMX20_02853	0.28	-1.0
3,009,402	-		MPMX20_02853	0.28	-1.0
3,009,471	-		MPMX20_02853	0.33	-0.7
3,009,477	+		MPMX20_02853	0.33	-1.0
3,009,483	-		MPMX20_02853	0.34	-0.2
3,009,485	-		MPMX20_02853	0.34	-0.6
3,009,485	-		MPMX20_02853	0.34	+0.4
3,009,528	+		MPMX20_02853	0.37	-2.7
3,009,530	-		MPMX20_02853	0.37	-1.8
3,009,560	-		MPMX20_02853	0.39	-2.3
3,009,599	+		MPMX20_02853	0.42	-1.3
3,009,604	+		MPMX20_02853	0.43	-3.7
3,009,604	+		MPMX20_02853	0.43	-0.1
3,009,604	+		MPMX20_02853	0.43	-0.5
3,009,604	+		MPMX20_02853	0.43	-0.8
3,009,612	-		MPMX20_02853	0.43	-1.2
3,009,612	-		MPMX20_02853	0.43	-2.7
3,009,612	-		MPMX20_02853	0.43	-0.8
3,009,633	+		MPMX20_02853	0.45	-1.2
3,009,641	+		MPMX20_02853	0.45	+0.1
3,009,641	-		MPMX20_02853	0.45	-1.4
3,009,644	+		MPMX20_02853	0.45	-1.5
3,009,677	+		MPMX20_02853	0.48	-2.8
3,009,694	+		MPMX20_02853	0.49	+0.6
3,009,766	+		MPMX20_02853	0.54	-1.7
3,009,772	-		MPMX20_02853	0.55	+0.0
3,009,772	-		MPMX20_02853	0.55	-0.6
3,009,812	-		MPMX20_02853	0.57	-0.5
3,009,812	-		MPMX20_02853	0.57	+0.1
3,009,818	-		MPMX20_02853	0.58	-0.3
3,009,831	+		MPMX20_02853	0.59	-1.9
3,009,839	-		MPMX20_02853	0.59	+0.7
3,009,839	-		MPMX20_02853	0.59	-0.4
3,009,860	+		MPMX20_02853	0.61	-2.0
3,009,883	+		MPMX20_02853	0.63	-0.6
3,009,885	+		MPMX20_02853	0.63	-2.0
3,009,885	+		MPMX20_02853	0.63	-2.5
3,009,890	+		MPMX20_02853	0.63	-1.8
3,009,890	+		MPMX20_02853	0.63	-0.1
3,009,890	+		MPMX20_02853	0.63	-2.2
3,009,897	+		MPMX20_02853	0.64	-1.5
3,009,930	-		MPMX20_02853	0.66	-1.3
3,009,932	+		MPMX20_02853	0.66	+0.6
3,009,974	-		MPMX20_02853	0.69	-1.4
3,009,974	-		MPMX20_02853	0.69	-1.3
3,010,028	+		MPMX20_02853	0.73	-0.7
3,010,039	+		MPMX20_02853	0.74	-1.4
3,010,105	+		MPMX20_02853	0.78	+2.1
3,010,110	+		MPMX20_02853	0.79	-1.2
3,010,115	+		MPMX20_02853	0.79	-1.9
3,010,115	+		MPMX20_02853	0.79	-0.1
3,010,152	+		MPMX20_02853	0.82	+0.6
3,010,152	+		MPMX20_02853	0.82	-3.7
3,010,152	+		MPMX20_02853	0.82	-1.8
3,010,152	+		MPMX20_02853	0.82	-1.0
3,010,156	+		MPMX20_02853	0.82	-0.7
3,010,160	-		MPMX20_02853	0.82	-3.5
3,010,164	-		MPMX20_02853	0.83	+0.4
3,010,175	-		MPMX20_02853	0.83	-1.0
3,010,175	-		MPMX20_02853	0.83	-1.5
3,010,214	-		MPMX20_02853	0.86	-1.4
3,010,214	-		MPMX20_02853	0.86	+0.1
3,010,247	+		MPMX20_02853	0.89	-0.5
3,010,255	-		MPMX20_02853	0.89	-1.8
3,010,255	-		MPMX20_02853	0.89	-2.0
3,010,326	+				-0.2
3,010,334	-				-0.7
3,010,334	-				-0.9
3,010,357	-				-0.4
3,010,380	+				+0.8
3,010,380	+				-1.3
3,010,380	+				-2.1
3,010,380	+				-0.9
3,010,388	-				-0.8
3,010,405	+				-1.0
3,010,405	+				-1.1
3,010,405	+				+0.1
3,010,413	-				-1.6
3,010,413	-				-0.0
3,010,427	+				+1.2
3,010,427	+				-1.6
3,010,435	-				-1.8
3,010,461	+				+0.7
3,010,461	+				-0.3
3,010,461	+				-0.4
3,010,461	+				+0.0
3,010,461	+				-0.5
3,010,461	+				+0.7
3,010,461	+				+0.8
3,010,465	+				+0.5
3,010,466	+				-1.0
3,010,469	-				-1.6
3,010,469	-				-1.2
3,010,469	-				-0.7
3,010,469	-				+0.0
3,010,479	-				-0.8
3,010,649	+				-1.0
3,010,657	-				-1.8
3,010,657	-				-2.6
3,010,657	-				-1.5
3,010,657	-				-1.9
3,010,659	+				-1.0
3,010,667	+				-1.8
3,010,667	-				-0.5
3,010,675	-				-1.4
3,010,702	+		MPMX20_02854	0.11	-0.8
3,010,704	-		MPMX20_02854	0.11	-0.5
3,010,710	+		MPMX20_02854	0.12	+0.0
3,010,742	-		MPMX20_02854	0.16	-1.2
3,010,751	+		MPMX20_02854	0.17	-1.5
3,010,751	+		MPMX20_02854	0.17	+0.3
3,010,751	+		MPMX20_02854	0.17	-2.1
3,010,754	-		MPMX20_02854	0.17	-1.6
3,010,758	+		MPMX20_02854	0.18	-0.4
3,010,759	-		MPMX20_02854	0.18	-0.6
3,010,759	-		MPMX20_02854	0.18	-0.7
3,010,759	-		MPMX20_02854	0.18	-1.4
3,010,759	-		MPMX20_02854	0.18	+0.3
3,010,759	-		MPMX20_02854	0.18	+0.0
3,010,763	+		MPMX20_02854	0.18	-0.8
3,010,767	-		MPMX20_02854	0.19	-2.3
3,010,782	-		MPMX20_02854	0.21	-0.8
3,010,804	+		MPMX20_02854	0.23	-1.2
3,010,804	+		MPMX20_02854	0.23	+0.6
3,010,812	-		MPMX20_02854	0.24	-2.1
3,010,812	-		MPMX20_02854	0.24	-2.5
3,010,878	-		MPMX20_02854	0.32	-0.5
3,010,878	-		MPMX20_02854	0.32	-0.5
3,010,884	-		MPMX20_02854	0.33	-0.8
3,010,886	-		MPMX20_02854	0.33	-1.0
3,010,909	+		MPMX20_02854	0.36	-1.1
3,010,914	+		MPMX20_02854	0.36	-1.5
3,010,917	-		MPMX20_02854	0.37	-0.7
3,010,917	-		MPMX20_02854	0.37	-2.0
3,010,922	-		MPMX20_02854	0.37	-0.3
3,010,960	+		MPMX20_02854	0.42	-1.8
3,011,050	+		MPMX20_02854	0.53	-1.0
3,011,053	+		MPMX20_02854	0.53	-1.2
3,011,053	+		MPMX20_02854	0.53	-1.7
3,011,095	-		MPMX20_02854	0.58	-1.4
3,011,223	+		MPMX20_02854	0.73	-1.2
3,011,258	+		MPMX20_02854	0.78	-1.3
3,011,293	-		MPMX20_02854	0.82	-0.9
3,011,302	+		MPMX20_02854	0.83	-2.1
3,011,302	+		MPMX20_02854	0.83	-1.3
3,011,322	+		MPMX20_02854	0.85	-1.8
3,011,332	+		MPMX20_02854	0.86	-0.3
3,011,341	-		MPMX20_02854	0.87	-0.2
3,011,343	+		MPMX20_02854	0.88	-1.8
3,011,343	+		MPMX20_02854	0.88	-1.4
3,011,343	+		MPMX20_02854	0.88	-1.8
3,011,343	+		MPMX20_02854	0.88	-0.2
3,011,343	+		MPMX20_02854	0.88	-1.3
3,011,343	+		MPMX20_02854	0.88	-2.2
3,011,345	+		MPMX20_02854	0.88	-2.1
3,011,345	+		MPMX20_02854	0.88	-0.8
3,011,348	+		MPMX20_02854	0.88	-0.2
3,011,351	+		MPMX20_02854	0.89	+0.2
3,011,351	-		MPMX20_02854	0.89	+0.5
3,011,351	-		MPMX20_02854	0.89	-1.5
3,011,351	-		MPMX20_02854	0.89	-0.5
3,011,351	-		MPMX20_02854	0.89	-1.4
3,011,356	-		MPMX20_02854	0.89	-0.3
3,011,361	+		MPMX20_02854	0.90	+1.1
3,011,361	+		MPMX20_02854	0.90	-0.7
3,011,371	+				-1.2
3,011,371	+				+1.4
3,011,379	-				-0.9
3,011,379	-				-0.1
3,011,379	-				+0.4
3,011,379	-				-2.1
3,011,396	+				-1.1
3,011,397	+				-1.1
3,011,401	+				+0.0
3,011,401	+				-0.7