Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01972

Experiment: L-Malic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01970 and MPMX20_01971 are separated by 118 nucleotidesMPMX20_01971 and MPMX20_01972 are separated by 4 nucleotidesMPMX20_01972 and MPMX20_01973 are separated by 153 nucleotides MPMX20_01970: MPMX20_01970 - hypothetical protein, at 2,061,927 to 2,063,522 _01970 MPMX20_01971: MPMX20_01971 - tRNA-Val, at 2,063,641 to 2,063,717 _01971 MPMX20_01972: MPMX20_01972 - tRNA-Val, at 2,063,722 to 2,063,798 _01972 MPMX20_01973: MPMX20_01973 - Multidrug resistance protein MdtK, at 2,063,952 to 2,065,313 _01973 Position (kb) 2063 2064Strain fitness (log2 ratio) -3 -2 -1 0 1at 2062.760 kb on - strand, within MPMX20_01970at 2062.772 kb on - strand, within MPMX20_01970at 2062.777 kb on - strand, within MPMX20_01970at 2062.951 kb on + strand, within MPMX20_01970at 2062.976 kb on - strand, within MPMX20_01970at 2062.976 kb on - strand, within MPMX20_01970at 2062.976 kb on - strand, within MPMX20_01970at 2062.981 kb on - strand, within MPMX20_01970at 2063.023 kb on + strand, within MPMX20_01970at 2063.028 kb on + strand, within MPMX20_01970at 2063.028 kb on + strand, within MPMX20_01970at 2063.046 kb on - strand, within MPMX20_01970at 2063.174 kb on - strand, within MPMX20_01970at 2063.174 kb on - strand, within MPMX20_01970at 2063.274 kb on - strand, within MPMX20_01970at 2063.300 kb on + strand, within MPMX20_01970at 2063.308 kb on - strand, within MPMX20_01970at 2063.409 kb on + strandat 2063.500 kb on - strandat 2063.500 kb on - strandat 2063.548 kb on + strandat 2063.645 kb on - strandat 2063.786 kb on - strand, within MPMX20_01972at 2063.920 kb on - strandat 2063.982 kb on + strandat 2064.036 kb on + strandat 2064.044 kb on - strandat 2064.044 kb on - strandat 2064.096 kb on - strand, within MPMX20_01973at 2064.097 kb on - strand, within MPMX20_01973at 2064.118 kb on - strand, within MPMX20_01973at 2064.187 kb on - strand, within MPMX20_01973at 2064.187 kb on - strand, within MPMX20_01973at 2064.212 kb on + strand, within MPMX20_01973at 2064.220 kb on - strand, within MPMX20_01973at 2064.220 kb on - strand, within MPMX20_01973at 2064.300 kb on - strand, within MPMX20_01973at 2064.337 kb on + strand, within MPMX20_01973at 2064.343 kb on - strand, within MPMX20_01973at 2064.607 kb on - strand, within MPMX20_01973at 2064.692 kb on + strand, within MPMX20_01973at 2064.706 kb on - strand, within MPMX20_01973

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Malic (C)
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2,062,760 - MPMX20_01970 0.52 +1.5
2,062,772 - MPMX20_01970 0.53 -0.9
2,062,777 - MPMX20_01970 0.53 +1.0
2,062,951 + MPMX20_01970 0.64 +1.5
2,062,976 - MPMX20_01970 0.66 -0.2
2,062,976 - MPMX20_01970 0.66 +0.7
2,062,976 - MPMX20_01970 0.66 -0.2
2,062,981 - MPMX20_01970 0.66 -2.3
2,063,023 + MPMX20_01970 0.69 -1.7
2,063,028 + MPMX20_01970 0.69 -0.0
2,063,028 + MPMX20_01970 0.69 +0.5
2,063,046 - MPMX20_01970 0.70 -1.1
2,063,174 - MPMX20_01970 0.78 -0.8
2,063,174 - MPMX20_01970 0.78 +1.0
2,063,274 - MPMX20_01970 0.84 +0.5
2,063,300 + MPMX20_01970 0.86 -0.1
2,063,308 - MPMX20_01970 0.87 +1.6
2,063,409 + -0.6
2,063,500 - +0.8
2,063,500 - -0.5
2,063,548 + -0.4
2,063,645 - -0.1
2,063,786 - MPMX20_01972 0.83 -3.6
2,063,920 - -0.4
2,063,982 + -0.1
2,064,036 + -1.0
2,064,044 - +1.6
2,064,044 - +1.1
2,064,096 - MPMX20_01973 0.11 +1.5
2,064,097 - MPMX20_01973 0.11 -0.2
2,064,118 - MPMX20_01973 0.12 +1.0
2,064,187 - MPMX20_01973 0.17 +0.0
2,064,187 - MPMX20_01973 0.17 -1.8
2,064,212 + MPMX20_01973 0.19 -0.9
2,064,220 - MPMX20_01973 0.20 -2.2
2,064,220 - MPMX20_01973 0.20 +1.0
2,064,300 - MPMX20_01973 0.26 +0.5
2,064,337 + MPMX20_01973 0.28 -0.1
2,064,343 - MPMX20_01973 0.29 +1.3
2,064,607 - MPMX20_01973 0.48 -0.7
2,064,692 + MPMX20_01973 0.54 +0.6
2,064,706 - MPMX20_01973 0.55 -0.5

Or see this region's nucleotide sequence