Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01970 and MPMX20_01971 are separated by 118 nucleotides MPMX20_01971 and MPMX20_01972 are separated by 4 nucleotides MPMX20_01972 and MPMX20_01973 are separated by 153 nucleotides
MPMX20_01970: MPMX20_01970 - hypothetical protein, at 2,061,927 to 2,063,522
_01970
MPMX20_01971: MPMX20_01971 - tRNA-Val, at 2,063,641 to 2,063,717
_01971
MPMX20_01972: MPMX20_01972 - tRNA-Val, at 2,063,722 to 2,063,798
_01972
MPMX20_01973: MPMX20_01973 - Multidrug resistance protein MdtK, at 2,063,952 to 2,065,313
_01973
Position (kb)
2063
2064 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2062.760 kb on - strand, within MPMX20_01970 at 2062.772 kb on - strand, within MPMX20_01970 at 2062.777 kb on - strand, within MPMX20_01970 at 2062.951 kb on + strand, within MPMX20_01970 at 2062.976 kb on - strand, within MPMX20_01970 at 2062.976 kb on - strand, within MPMX20_01970 at 2062.976 kb on - strand, within MPMX20_01970 at 2062.981 kb on - strand, within MPMX20_01970 at 2063.023 kb on + strand, within MPMX20_01970 at 2063.028 kb on + strand, within MPMX20_01970 at 2063.028 kb on + strand, within MPMX20_01970 at 2063.046 kb on - strand, within MPMX20_01970 at 2063.174 kb on - strand, within MPMX20_01970 at 2063.174 kb on - strand, within MPMX20_01970 at 2063.274 kb on - strand, within MPMX20_01970 at 2063.300 kb on + strand, within MPMX20_01970 at 2063.308 kb on - strand, within MPMX20_01970 at 2063.409 kb on + strand at 2063.500 kb on - strand at 2063.500 kb on - strand at 2063.548 kb on + strand at 2063.645 kb on - strand at 2063.786 kb on - strand, within MPMX20_01972 at 2063.920 kb on - strand at 2063.982 kb on + strand at 2064.036 kb on + strand at 2064.044 kb on - strand at 2064.044 kb on - strand at 2064.096 kb on - strand, within MPMX20_01973 at 2064.097 kb on - strand, within MPMX20_01973 at 2064.118 kb on - strand, within MPMX20_01973 at 2064.187 kb on - strand, within MPMX20_01973 at 2064.187 kb on - strand, within MPMX20_01973 at 2064.212 kb on + strand, within MPMX20_01973 at 2064.220 kb on - strand, within MPMX20_01973 at 2064.220 kb on - strand, within MPMX20_01973 at 2064.300 kb on - strand, within MPMX20_01973 at 2064.337 kb on + strand, within MPMX20_01973 at 2064.343 kb on - strand, within MPMX20_01973 at 2064.607 kb on - strand, within MPMX20_01973 at 2064.692 kb on + strand, within MPMX20_01973 at 2064.706 kb on - strand, within MPMX20_01973
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 2,062,760 - MPMX20_01970 0.52 +1.5 2,062,772 - MPMX20_01970 0.53 -0.9 2,062,777 - MPMX20_01970 0.53 +1.0 2,062,951 + MPMX20_01970 0.64 +1.5 2,062,976 - MPMX20_01970 0.66 -0.2 2,062,976 - MPMX20_01970 0.66 +0.7 2,062,976 - MPMX20_01970 0.66 -0.2 2,062,981 - MPMX20_01970 0.66 -2.3 2,063,023 + MPMX20_01970 0.69 -1.7 2,063,028 + MPMX20_01970 0.69 -0.0 2,063,028 + MPMX20_01970 0.69 +0.5 2,063,046 - MPMX20_01970 0.70 -1.1 2,063,174 - MPMX20_01970 0.78 -0.8 2,063,174 - MPMX20_01970 0.78 +1.0 2,063,274 - MPMX20_01970 0.84 +0.5 2,063,300 + MPMX20_01970 0.86 -0.1 2,063,308 - MPMX20_01970 0.87 +1.6 2,063,409 + -0.6 2,063,500 - +0.8 2,063,500 - -0.5 2,063,548 + -0.4 2,063,645 - -0.1 2,063,786 - MPMX20_01972 0.83 -3.6 2,063,920 - -0.4 2,063,982 + -0.1 2,064,036 + -1.0 2,064,044 - +1.6 2,064,044 - +1.1 2,064,096 - MPMX20_01973 0.11 +1.5 2,064,097 - MPMX20_01973 0.11 -0.2 2,064,118 - MPMX20_01973 0.12 +1.0 2,064,187 - MPMX20_01973 0.17 +0.0 2,064,187 - MPMX20_01973 0.17 -1.8 2,064,212 + MPMX20_01973 0.19 -0.9 2,064,220 - MPMX20_01973 0.20 -2.2 2,064,220 - MPMX20_01973 0.20 +1.0 2,064,300 - MPMX20_01973 0.26 +0.5 2,064,337 + MPMX20_01973 0.28 -0.1 2,064,343 - MPMX20_01973 0.29 +1.3 2,064,607 - MPMX20_01973 0.48 -0.7 2,064,692 + MPMX20_01973 0.54 +0.6 2,064,706 - MPMX20_01973 0.55 -0.5
Or see this region's nucleotide sequence