Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00712

Experiment: L-Malic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00710 and MPMX20_00711 are separated by 1 nucleotidesMPMX20_00711 and MPMX20_00712 are separated by 3 nucleotidesMPMX20_00712 and MPMX20_00713 are separated by 211 nucleotidesMPMX20_00713 and MPMX20_00714 are separated by 34 nucleotides MPMX20_00710: MPMX20_00710 - Bifunctional aspartokinase/homoserine dehydrogenase 1, at 731,140 to 733,602 _00710 MPMX20_00711: MPMX20_00711 - Homoserine kinase, at 733,604 to 734,533 _00711 MPMX20_00712: MPMX20_00712 - Threonine synthase, at 734,537 to 735,823 _00712 MPMX20_00713: MPMX20_00713 - hypothetical protein, at 736,035 to 736,334 _00713 MPMX20_00714: MPMX20_00714 - Peroxide stress resistance protein YaaA, at 736,369 to 737,139 _00714 Position (kb) 734 735 736Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 733.597 kb on + strandat 733.624 kb on + strandat 733.660 kb on + strandat 733.697 kb on - strand, within MPMX20_00711at 733.702 kb on - strand, within MPMX20_00711at 733.731 kb on + strand, within MPMX20_00711at 733.732 kb on - strand, within MPMX20_00711at 733.732 kb on - strand, within MPMX20_00711at 733.745 kb on + strand, within MPMX20_00711at 733.811 kb on + strand, within MPMX20_00711at 733.814 kb on - strand, within MPMX20_00711at 733.814 kb on - strand, within MPMX20_00711at 733.829 kb on - strand, within MPMX20_00711at 733.829 kb on - strand, within MPMX20_00711at 733.881 kb on + strand, within MPMX20_00711at 733.881 kb on + strand, within MPMX20_00711at 733.884 kb on - strand, within MPMX20_00711at 733.886 kb on + strand, within MPMX20_00711at 733.886 kb on + strand, within MPMX20_00711at 733.886 kb on + strand, within MPMX20_00711at 733.889 kb on - strand, within MPMX20_00711at 733.889 kb on - strand, within MPMX20_00711at 733.894 kb on - strand, within MPMX20_00711at 733.997 kb on - strand, within MPMX20_00711at 734.103 kb on + strand, within MPMX20_00711at 734.103 kb on + strand, within MPMX20_00711at 734.103 kb on + strand, within MPMX20_00711at 734.104 kb on - strand, within MPMX20_00711at 734.111 kb on - strand, within MPMX20_00711at 734.111 kb on - strand, within MPMX20_00711at 734.111 kb on - strand, within MPMX20_00711at 734.131 kb on - strand, within MPMX20_00711at 734.139 kb on + strand, within MPMX20_00711at 734.154 kb on - strand, within MPMX20_00711at 734.166 kb on + strand, within MPMX20_00711at 734.197 kb on + strand, within MPMX20_00711at 734.205 kb on - strand, within MPMX20_00711at 734.205 kb on - strand, within MPMX20_00711at 734.214 kb on + strand, within MPMX20_00711at 734.234 kb on + strand, within MPMX20_00711at 734.242 kb on - strand, within MPMX20_00711at 734.302 kb on + strand, within MPMX20_00711at 734.302 kb on + strand, within MPMX20_00711at 734.307 kb on + strand, within MPMX20_00711at 734.307 kb on + strand, within MPMX20_00711at 734.307 kb on + strand, within MPMX20_00711at 734.307 kb on + strand, within MPMX20_00711at 734.315 kb on - strand, within MPMX20_00711at 734.315 kb on - strand, within MPMX20_00711at 734.325 kb on + strand, within MPMX20_00711at 734.368 kb on + strand, within MPMX20_00711at 734.369 kb on - strand, within MPMX20_00711at 734.419 kb on + strand, within MPMX20_00711at 734.452 kb on - strandat 734.503 kb on + strandat 734.527 kb on - strandat 734.572 kb on + strandat 734.572 kb on + strandat 734.587 kb on + strandat 734.595 kb on + strandat 734.595 kb on + strandat 734.603 kb on - strandat 734.603 kb on - strandat 734.623 kb on + strandat 734.661 kb on + strandat 734.672 kb on - strand, within MPMX20_00712at 734.680 kb on - strand, within MPMX20_00712at 734.717 kb on + strand, within MPMX20_00712at 734.808 kb on - strand, within MPMX20_00712at 734.820 kb on + strand, within MPMX20_00712at 734.820 kb on + strand, within MPMX20_00712at 734.820 kb on + strand, within MPMX20_00712at 734.820 kb on + strand, within MPMX20_00712at 734.828 kb on - strand, within MPMX20_00712at 734.830 kb on + strand, within MPMX20_00712at 734.830 kb on + strand, within MPMX20_00712at 734.830 kb on + strand, within MPMX20_00712at 734.843 kb on + strand, within MPMX20_00712at 734.846 kb on - strand, within MPMX20_00712at 735.014 kb on + strand, within MPMX20_00712at 735.155 kb on + strand, within MPMX20_00712at 735.163 kb on - strand, within MPMX20_00712at 735.163 kb on - strand, within MPMX20_00712at 735.202 kb on + strand, within MPMX20_00712at 735.391 kb on + strand, within MPMX20_00712at 735.441 kb on + strand, within MPMX20_00712at 735.493 kb on + strand, within MPMX20_00712at 735.514 kb on + strand, within MPMX20_00712at 735.514 kb on + strand, within MPMX20_00712at 735.541 kb on - strand, within MPMX20_00712at 735.570 kb on - strand, within MPMX20_00712at 735.572 kb on + strand, within MPMX20_00712at 735.582 kb on + strand, within MPMX20_00712at 735.582 kb on + strand, within MPMX20_00712at 735.582 kb on + strand, within MPMX20_00712at 735.582 kb on + strand, within MPMX20_00712at 735.582 kb on + strand, within MPMX20_00712at 735.582 kb on + strand, within MPMX20_00712at 735.582 kb on + strand, within MPMX20_00712at 735.582 kb on + strand, within MPMX20_00712at 735.583 kb on - strand, within MPMX20_00712at 735.583 kb on - strand, within MPMX20_00712at 735.590 kb on - strand, within MPMX20_00712at 735.590 kb on - strand, within MPMX20_00712at 735.590 kb on - strand, within MPMX20_00712at 735.590 kb on - strand, within MPMX20_00712at 735.617 kb on - strand, within MPMX20_00712at 735.617 kb on - strand, within MPMX20_00712at 735.650 kb on - strand, within MPMX20_00712at 735.652 kb on + strand, within MPMX20_00712at 735.734 kb on - strandat 735.834 kb on + strandat 735.834 kb on + strandat 735.848 kb on + strandat 735.968 kb on - strandat 736.007 kb on + strandat 736.103 kb on - strand, within MPMX20_00713at 736.103 kb on - strand, within MPMX20_00713at 736.151 kb on + strand, within MPMX20_00713at 736.220 kb on - strand, within MPMX20_00713at 736.272 kb on - strand, within MPMX20_00713at 736.381 kb on + strandat 736.444 kb on - strandat 736.446 kb on - strand, within MPMX20_00714at 736.474 kb on + strand, within MPMX20_00714at 736.474 kb on + strand, within MPMX20_00714at 736.482 kb on - strand, within MPMX20_00714at 736.532 kb on + strand, within MPMX20_00714at 736.532 kb on + strand, within MPMX20_00714at 736.532 kb on + strand, within MPMX20_00714at 736.532 kb on + strand, within MPMX20_00714at 736.540 kb on - strand, within MPMX20_00714at 736.540 kb on - strand, within MPMX20_00714at 736.540 kb on - strand, within MPMX20_00714at 736.641 kb on + strand, within MPMX20_00714at 736.644 kb on + strand, within MPMX20_00714at 736.716 kb on - strand, within MPMX20_00714at 736.730 kb on - strand, within MPMX20_00714at 736.773 kb on + strand, within MPMX20_00714at 736.791 kb on + strand, within MPMX20_00714at 736.800 kb on + strand, within MPMX20_00714

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Malic (C)
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733,597 + -1.5
733,624 + -4.4
733,660 + -2.8
733,697 - MPMX20_00711 0.10 -1.2
733,702 - MPMX20_00711 0.11 -2.3
733,731 + MPMX20_00711 0.14 -2.2
733,732 - MPMX20_00711 0.14 -4.6
733,732 - MPMX20_00711 0.14 -0.4
733,745 + MPMX20_00711 0.15 -2.7
733,811 + MPMX20_00711 0.22 -2.4
733,814 - MPMX20_00711 0.23 +1.2
733,814 - MPMX20_00711 0.23 -2.0
733,829 - MPMX20_00711 0.24 -4.2
733,829 - MPMX20_00711 0.24 -2.5
733,881 + MPMX20_00711 0.30 -4.2
733,881 + MPMX20_00711 0.30 -3.1
733,884 - MPMX20_00711 0.30 -3.1
733,886 + MPMX20_00711 0.30 -3.0
733,886 + MPMX20_00711 0.30 -1.9
733,886 + MPMX20_00711 0.30 -2.2
733,889 - MPMX20_00711 0.31 -2.6
733,889 - MPMX20_00711 0.31 -3.3
733,894 - MPMX20_00711 0.31 -3.5
733,997 - MPMX20_00711 0.42 -3.8
734,103 + MPMX20_00711 0.54 -2.7
734,103 + MPMX20_00711 0.54 -3.6
734,103 + MPMX20_00711 0.54 -2.3
734,104 - MPMX20_00711 0.54 -3.4
734,111 - MPMX20_00711 0.55 -3.5
734,111 - MPMX20_00711 0.55 -1.5
734,111 - MPMX20_00711 0.55 -2.9
734,131 - MPMX20_00711 0.57 -3.3
734,139 + MPMX20_00711 0.58 -1.3
734,154 - MPMX20_00711 0.59 -3.2
734,166 + MPMX20_00711 0.60 -4.4
734,197 + MPMX20_00711 0.64 -3.3
734,205 - MPMX20_00711 0.65 -3.5
734,205 - MPMX20_00711 0.65 -3.6
734,214 + MPMX20_00711 0.66 -1.5
734,234 + MPMX20_00711 0.68 -0.1
734,242 - MPMX20_00711 0.69 -2.3
734,302 + MPMX20_00711 0.75 -4.6
734,302 + MPMX20_00711 0.75 -2.4
734,307 + MPMX20_00711 0.76 -1.6
734,307 + MPMX20_00711 0.76 -3.3
734,307 + MPMX20_00711 0.76 -2.8
734,307 + MPMX20_00711 0.76 -1.8
734,315 - MPMX20_00711 0.76 -1.2
734,315 - MPMX20_00711 0.76 -2.9
734,325 + MPMX20_00711 0.78 -1.8
734,368 + MPMX20_00711 0.82 -2.3
734,369 - MPMX20_00711 0.82 -0.4
734,419 + MPMX20_00711 0.88 -3.0
734,452 - -1.6
734,503 + -0.4
734,527 - -2.3
734,572 + -1.3
734,572 + -3.6
734,587 + -1.8
734,595 + -3.0
734,595 + -2.5
734,603 - -2.7
734,603 - -2.0
734,623 + -3.7
734,661 + -3.8
734,672 - MPMX20_00712 0.10 -4.0
734,680 - MPMX20_00712 0.11 -3.2
734,717 + MPMX20_00712 0.14 -1.6
734,808 - MPMX20_00712 0.21 -2.0
734,820 + MPMX20_00712 0.22 -2.0
734,820 + MPMX20_00712 0.22 -2.8
734,820 + MPMX20_00712 0.22 -4.6
734,820 + MPMX20_00712 0.22 -3.7
734,828 - MPMX20_00712 0.23 -2.6
734,830 + MPMX20_00712 0.23 -4.3
734,830 + MPMX20_00712 0.23 -3.1
734,830 + MPMX20_00712 0.23 -4.5
734,843 + MPMX20_00712 0.24 -0.8
734,846 - MPMX20_00712 0.24 -2.7
735,014 + MPMX20_00712 0.37 -2.3
735,155 + MPMX20_00712 0.48 -2.7
735,163 - MPMX20_00712 0.49 -2.2
735,163 - MPMX20_00712 0.49 -4.0
735,202 + MPMX20_00712 0.52 -2.7
735,391 + MPMX20_00712 0.66 -0.1
735,441 + MPMX20_00712 0.70 -3.3
735,493 + MPMX20_00712 0.74 -2.3
735,514 + MPMX20_00712 0.76 -2.3
735,514 + MPMX20_00712 0.76 -0.4
735,541 - MPMX20_00712 0.78 -4.6
735,570 - MPMX20_00712 0.80 -4.3
735,572 + MPMX20_00712 0.80 -4.6
735,582 + MPMX20_00712 0.81 -2.6
735,582 + MPMX20_00712 0.81 -1.8
735,582 + MPMX20_00712 0.81 -1.8
735,582 + MPMX20_00712 0.81 -1.8
735,582 + MPMX20_00712 0.81 +0.2
735,582 + MPMX20_00712 0.81 -3.7
735,582 + MPMX20_00712 0.81 -1.6
735,582 + MPMX20_00712 0.81 -4.7
735,583 - MPMX20_00712 0.81 -1.3
735,583 - MPMX20_00712 0.81 -1.9
735,590 - MPMX20_00712 0.82 -2.8
735,590 - MPMX20_00712 0.82 -4.6
735,590 - MPMX20_00712 0.82 -2.6
735,590 - MPMX20_00712 0.82 -0.6
735,617 - MPMX20_00712 0.84 +0.2
735,617 - MPMX20_00712 0.84 -2.7
735,650 - MPMX20_00712 0.86 -3.3
735,652 + MPMX20_00712 0.87 -4.6
735,734 - -1.9
735,834 + -0.7
735,834 + -1.5
735,848 + -0.6
735,968 - -2.4
736,007 + +0.2
736,103 - MPMX20_00713 0.23 -1.1
736,103 - MPMX20_00713 0.23 +0.1
736,151 + MPMX20_00713 0.39 -1.5
736,220 - MPMX20_00713 0.62 -0.5
736,272 - MPMX20_00713 0.79 +1.2
736,381 + -0.8
736,444 - -0.9
736,446 - MPMX20_00714 0.10 -1.9
736,474 + MPMX20_00714 0.14 -1.5
736,474 + MPMX20_00714 0.14 -0.5
736,482 - MPMX20_00714 0.15 -1.3
736,532 + MPMX20_00714 0.21 -1.0
736,532 + MPMX20_00714 0.21 +1.1
736,532 + MPMX20_00714 0.21 -0.6
736,532 + MPMX20_00714 0.21 -0.6
736,540 - MPMX20_00714 0.22 +0.0
736,540 - MPMX20_00714 0.22 +2.8
736,540 - MPMX20_00714 0.22 -0.1
736,641 + MPMX20_00714 0.35 -0.2
736,644 + MPMX20_00714 0.36 +1.0
736,716 - MPMX20_00714 0.45 -1.4
736,730 - MPMX20_00714 0.47 +0.8
736,773 + MPMX20_00714 0.52 +1.2
736,791 + MPMX20_00714 0.55 -0.7
736,800 + MPMX20_00714 0.56 -0.2

Or see this region's nucleotide sequence