Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04527 and MPMX20_04528 are separated by 49 nucleotides MPMX20_04528 and MPMX20_04529 are separated by 209 nucleotides
MPMX20_04527: MPMX20_04527 - Glycerol dehydrogenase, at 4,737,193 to 4,738,296
_04527
MPMX20_04528: MPMX20_04528 - Catalase-peroxidase, at 4,738,346 to 4,740,526
_04528
MPMX20_04529: MPMX20_04529 - 5,10-methylenetetrahydrofolate reductase, at 4,740,736 to 4,741,626
_04529
Position (kb)
4738
4739
4740
4741 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4737.445 kb on - strand, within MPMX20_04527 at 4737.454 kb on - strand, within MPMX20_04527 at 4737.454 kb on - strand, within MPMX20_04527 at 4737.486 kb on - strand, within MPMX20_04527 at 4737.540 kb on - strand, within MPMX20_04527 at 4737.601 kb on - strand, within MPMX20_04527 at 4737.787 kb on + strand, within MPMX20_04527 at 4737.795 kb on - strand, within MPMX20_04527 at 4737.795 kb on - strand, within MPMX20_04527 at 4737.799 kb on + strand, within MPMX20_04527 at 4737.831 kb on + strand, within MPMX20_04527 at 4737.839 kb on - strand, within MPMX20_04527 at 4737.906 kb on - strand, within MPMX20_04527 at 4737.940 kb on - strand, within MPMX20_04527 at 4738.077 kb on + strand, within MPMX20_04527 at 4738.089 kb on + strand, within MPMX20_04527 at 4738.097 kb on + strand, within MPMX20_04527 at 4738.097 kb on + strand, within MPMX20_04527 at 4738.105 kb on - strand, within MPMX20_04527 at 4738.131 kb on - strand, within MPMX20_04527 at 4738.196 kb on - strand at 4738.196 kb on - strand at 4738.225 kb on - strand at 4738.233 kb on + strand at 4738.241 kb on - strand at 4738.256 kb on - strand at 4738.256 kb on - strand at 4738.256 kb on - strand at 4738.275 kb on - strand at 4738.362 kb on - strand at 4738.433 kb on + strand at 4738.448 kb on - strand at 4738.575 kb on + strand, within MPMX20_04528 at 4738.583 kb on - strand, within MPMX20_04528 at 4738.583 kb on - strand, within MPMX20_04528 at 4738.583 kb on - strand, within MPMX20_04528 at 4738.674 kb on - strand, within MPMX20_04528 at 4738.789 kb on - strand, within MPMX20_04528 at 4738.816 kb on + strand, within MPMX20_04528 at 4738.843 kb on - strand, within MPMX20_04528 at 4738.852 kb on + strand, within MPMX20_04528 at 4738.860 kb on - strand, within MPMX20_04528 at 4738.860 kb on - strand, within MPMX20_04528 at 4738.912 kb on + strand, within MPMX20_04528 at 4738.912 kb on + strand, within MPMX20_04528 at 4739.000 kb on + strand, within MPMX20_04528 at 4739.008 kb on - strand, within MPMX20_04528 at 4739.008 kb on - strand, within MPMX20_04528 at 4739.033 kb on + strand, within MPMX20_04528 at 4739.041 kb on - strand, within MPMX20_04528 at 4739.141 kb on - strand, within MPMX20_04528 at 4739.143 kb on + strand, within MPMX20_04528 at 4739.165 kb on - strand, within MPMX20_04528 at 4739.193 kb on + strand, within MPMX20_04528 at 4739.203 kb on - strand, within MPMX20_04528 at 4739.236 kb on - strand, within MPMX20_04528 at 4739.294 kb on - strand, within MPMX20_04528 at 4739.442 kb on - strand, within MPMX20_04528 at 4739.448 kb on + strand, within MPMX20_04528 at 4739.448 kb on + strand, within MPMX20_04528 at 4739.456 kb on - strand, within MPMX20_04528 at 4739.482 kb on + strand, within MPMX20_04528 at 4739.490 kb on - strand, within MPMX20_04528 at 4739.504 kb on + strand, within MPMX20_04528 at 4739.512 kb on - strand, within MPMX20_04528 at 4739.560 kb on - strand, within MPMX20_04528 at 4739.687 kb on - strand, within MPMX20_04528 at 4739.689 kb on + strand, within MPMX20_04528 at 4739.698 kb on + strand, within MPMX20_04528 at 4739.698 kb on + strand, within MPMX20_04528 at 4739.712 kb on + strand, within MPMX20_04528 at 4739.722 kb on + strand, within MPMX20_04528 at 4739.730 kb on - strand, within MPMX20_04528 at 4739.730 kb on - strand, within MPMX20_04528 at 4739.743 kb on + strand, within MPMX20_04528 at 4739.766 kb on + strand, within MPMX20_04528 at 4739.815 kb on + strand, within MPMX20_04528 at 4739.823 kb on - strand, within MPMX20_04528 at 4739.828 kb on - strand, within MPMX20_04528 at 4739.836 kb on + strand, within MPMX20_04528 at 4739.855 kb on - strand, within MPMX20_04528 at 4739.882 kb on - strand, within MPMX20_04528 at 4739.939 kb on + strand, within MPMX20_04528 at 4739.942 kb on - strand, within MPMX20_04528 at 4739.947 kb on - strand, within MPMX20_04528 at 4740.051 kb on - strand, within MPMX20_04528 at 4740.157 kb on - strand, within MPMX20_04528 at 4740.181 kb on - strand, within MPMX20_04528 at 4740.197 kb on - strand, within MPMX20_04528 at 4740.217 kb on - strand, within MPMX20_04528 at 4740.243 kb on - strand, within MPMX20_04528 at 4740.268 kb on + strand, within MPMX20_04528 at 4740.276 kb on - strand, within MPMX20_04528 at 4740.276 kb on - strand, within MPMX20_04528 at 4740.278 kb on + strand, within MPMX20_04528 at 4740.288 kb on + strand, within MPMX20_04528 at 4740.288 kb on + strand, within MPMX20_04528 at 4740.307 kb on + strand, within MPMX20_04528 at 4740.351 kb on - strand at 4740.365 kb on + strand at 4740.374 kb on + strand at 4740.402 kb on - strand at 4740.431 kb on + strand at 4740.454 kb on + strand at 4740.464 kb on + strand at 4740.464 kb on + strand at 4740.467 kb on - strand at 4740.511 kb on + strand at 4740.511 kb on + strand at 4740.519 kb on - strand at 4740.519 kb on - strand at 4740.519 kb on - strand at 4740.519 kb on - strand at 4740.519 kb on - strand at 4740.519 kb on - strand at 4740.526 kb on + strand at 4740.538 kb on + strand at 4740.538 kb on + strand at 4740.554 kb on - strand at 4740.587 kb on - strand at 4740.937 kb on + strand, within MPMX20_04529 at 4741.029 kb on + strand, within MPMX20_04529 at 4741.070 kb on + strand, within MPMX20_04529 at 4741.088 kb on - strand, within MPMX20_04529 at 4741.093 kb on + strand, within MPMX20_04529 at 4741.134 kb on - strand, within MPMX20_04529 at 4741.163 kb on + strand, within MPMX20_04529 at 4741.164 kb on + strand, within MPMX20_04529 at 4741.213 kb on - strand, within MPMX20_04529 at 4741.317 kb on + strand, within MPMX20_04529 at 4741.320 kb on - strand, within MPMX20_04529 at 4741.355 kb on + strand, within MPMX20_04529 at 4741.360 kb on - strand, within MPMX20_04529 at 4741.363 kb on + strand, within MPMX20_04529 at 4741.365 kb on - strand, within MPMX20_04529 at 4741.365 kb on - strand, within MPMX20_04529 at 4741.408 kb on - strand, within MPMX20_04529 at 4741.421 kb on + strand, within MPMX20_04529 at 4741.488 kb on - strand, within MPMX20_04529 at 4741.506 kb on - strand, within MPMX20_04529
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 4,737,445 - MPMX20_04527 0.23 +0.1 4,737,454 - MPMX20_04527 0.24 -1.1 4,737,454 - MPMX20_04527 0.24 +0.6 4,737,486 - MPMX20_04527 0.27 +0.7 4,737,540 - MPMX20_04527 0.31 +1.8 4,737,601 - MPMX20_04527 0.37 +0.8 4,737,787 + MPMX20_04527 0.54 -0.3 4,737,795 - MPMX20_04527 0.55 +0.5 4,737,795 - MPMX20_04527 0.55 -0.8 4,737,799 + MPMX20_04527 0.55 -2.5 4,737,831 + MPMX20_04527 0.58 -0.1 4,737,839 - MPMX20_04527 0.59 -0.9 4,737,906 - MPMX20_04527 0.65 -0.9 4,737,940 - MPMX20_04527 0.68 +1.5 4,738,077 + MPMX20_04527 0.80 -0.3 4,738,089 + MPMX20_04527 0.81 -0.2 4,738,097 + MPMX20_04527 0.82 +1.2 4,738,097 + MPMX20_04527 0.82 +0.1 4,738,105 - MPMX20_04527 0.83 +2.1 4,738,131 - MPMX20_04527 0.85 -0.7 4,738,196 - -1.4 4,738,196 - +0.0 4,738,225 - -1.5 4,738,233 + +1.3 4,738,241 - -0.1 4,738,256 - +0.8 4,738,256 - +0.2 4,738,256 - -0.9 4,738,275 - +0.0 4,738,362 - +0.5 4,738,433 + -2.7 4,738,448 - +0.3 4,738,575 + MPMX20_04528 0.10 +1.6 4,738,583 - MPMX20_04528 0.11 +0.5 4,738,583 - MPMX20_04528 0.11 -0.2 4,738,583 - MPMX20_04528 0.11 -0.0 4,738,674 - MPMX20_04528 0.15 +1.1 4,738,789 - MPMX20_04528 0.20 -0.8 4,738,816 + MPMX20_04528 0.22 +0.9 4,738,843 - MPMX20_04528 0.23 -0.8 4,738,852 + MPMX20_04528 0.23 -0.5 4,738,860 - MPMX20_04528 0.24 +0.1 4,738,860 - MPMX20_04528 0.24 +0.2 4,738,912 + MPMX20_04528 0.26 -2.5 4,738,912 + MPMX20_04528 0.26 +0.3 4,739,000 + MPMX20_04528 0.30 +0.5 4,739,008 - MPMX20_04528 0.30 +1.6 4,739,008 - MPMX20_04528 0.30 +0.7 4,739,033 + MPMX20_04528 0.31 +0.7 4,739,041 - MPMX20_04528 0.32 +2.9 4,739,141 - MPMX20_04528 0.36 -0.1 4,739,143 + MPMX20_04528 0.37 -0.8 4,739,165 - MPMX20_04528 0.38 -1.8 4,739,193 + MPMX20_04528 0.39 -0.0 4,739,203 - MPMX20_04528 0.39 +0.7 4,739,236 - MPMX20_04528 0.41 -0.1 4,739,294 - MPMX20_04528 0.43 -0.9 4,739,442 - MPMX20_04528 0.50 -0.1 4,739,448 + MPMX20_04528 0.51 +0.1 4,739,448 + MPMX20_04528 0.51 -0.9 4,739,456 - MPMX20_04528 0.51 -0.5 4,739,482 + MPMX20_04528 0.52 +0.9 4,739,490 - MPMX20_04528 0.52 -0.3 4,739,504 + MPMX20_04528 0.53 +0.2 4,739,512 - MPMX20_04528 0.53 +1.1 4,739,560 - MPMX20_04528 0.56 +1.0 4,739,687 - MPMX20_04528 0.61 -0.4 4,739,689 + MPMX20_04528 0.62 +1.6 4,739,698 + MPMX20_04528 0.62 -0.3 4,739,698 + MPMX20_04528 0.62 -1.5 4,739,712 + MPMX20_04528 0.63 -0.0 4,739,722 + MPMX20_04528 0.63 +0.0 4,739,730 - MPMX20_04528 0.63 +1.2 4,739,730 - MPMX20_04528 0.63 +2.1 4,739,743 + MPMX20_04528 0.64 -0.7 4,739,766 + MPMX20_04528 0.65 +1.1 4,739,815 + MPMX20_04528 0.67 +1.1 4,739,823 - MPMX20_04528 0.68 -1.8 4,739,828 - MPMX20_04528 0.68 -2.3 4,739,836 + MPMX20_04528 0.68 -0.8 4,739,855 - MPMX20_04528 0.69 -0.4 4,739,882 - MPMX20_04528 0.70 +0.2 4,739,939 + MPMX20_04528 0.73 -2.0 4,739,942 - MPMX20_04528 0.73 +1.1 4,739,947 - MPMX20_04528 0.73 +0.9 4,740,051 - MPMX20_04528 0.78 -1.2 4,740,157 - MPMX20_04528 0.83 +0.2 4,740,181 - MPMX20_04528 0.84 +0.1 4,740,197 - MPMX20_04528 0.85 -0.6 4,740,217 - MPMX20_04528 0.86 -0.2 4,740,243 - MPMX20_04528 0.87 +0.4 4,740,268 + MPMX20_04528 0.88 -0.5 4,740,276 - MPMX20_04528 0.88 +1.0 4,740,276 - MPMX20_04528 0.88 -0.2 4,740,278 + MPMX20_04528 0.89 -1.5 4,740,288 + MPMX20_04528 0.89 -0.3 4,740,288 + MPMX20_04528 0.89 -0.5 4,740,307 + MPMX20_04528 0.90 -0.6 4,740,351 - +0.5 4,740,365 + +1.1 4,740,374 + +1.0 4,740,402 - +0.8 4,740,431 + -0.0 4,740,454 + +0.2 4,740,464 + +1.7 4,740,464 + +1.4 4,740,467 - +2.4 4,740,511 + +0.9 4,740,511 + -0.0 4,740,519 - -1.5 4,740,519 - -1.4 4,740,519 - +0.9 4,740,519 - -0.0 4,740,519 - +1.5 4,740,519 - +0.8 4,740,526 + +0.8 4,740,538 + +0.2 4,740,538 + -0.3 4,740,554 - -0.9 4,740,587 - +0.4 4,740,937 + MPMX20_04529 0.23 -0.5 4,741,029 + MPMX20_04529 0.33 -0.5 4,741,070 + MPMX20_04529 0.37 -1.3 4,741,088 - MPMX20_04529 0.40 -1.9 4,741,093 + MPMX20_04529 0.40 -2.9 4,741,134 - MPMX20_04529 0.45 +0.2 4,741,163 + MPMX20_04529 0.48 +0.1 4,741,164 + MPMX20_04529 0.48 -0.9 4,741,213 - MPMX20_04529 0.54 -1.8 4,741,317 + MPMX20_04529 0.65 +1.0 4,741,320 - MPMX20_04529 0.66 -1.6 4,741,355 + MPMX20_04529 0.69 +2.1 4,741,360 - MPMX20_04529 0.70 -0.1 4,741,363 + MPMX20_04529 0.70 -0.8 4,741,365 - MPMX20_04529 0.71 +0.7 4,741,365 - MPMX20_04529 0.71 -0.2 4,741,408 - MPMX20_04529 0.75 +0.1 4,741,421 + MPMX20_04529 0.77 +0.2 4,741,488 - MPMX20_04529 0.84 -1.8 4,741,506 - MPMX20_04529 0.86 -0.1
Or see this region's nucleotide sequence