Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03771

Experiment: Tween 20 (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03769 and MPMX20_03770 are separated by 250 nucleotidesMPMX20_03770 and MPMX20_03771 are separated by 45 nucleotidesMPMX20_03771 and MPMX20_03772 are separated by 272 nucleotides MPMX20_03769: MPMX20_03769 - Cell division protein ZapA, at 3,972,678 to 3,973,007 _03769 MPMX20_03770: MPMX20_03770 - 5-formyltetrahydrofolate cyclo-ligase, at 3,973,258 to 3,973,854 _03770 MPMX20_03771: MPMX20_03771 - D-3-phosphoglycerate dehydrogenase, at 3,973,900 to 3,975,132 _03771 MPMX20_03772: MPMX20_03772 - Ribose-5-phosphate isomerase A, at 3,975,405 to 3,976,064 _03772 Position (kb) 3973 3974 3975 3976Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 3972.910 kb on + strand, within MPMX20_03769at 3972.910 kb on + strand, within MPMX20_03769at 3972.918 kb on - strand, within MPMX20_03769at 3972.918 kb on - strand, within MPMX20_03769at 3972.953 kb on + strand, within MPMX20_03769at 3972.961 kb on - strand, within MPMX20_03769at 3973.088 kb on - strandat 3973.207 kb on - strandat 3973.342 kb on - strand, within MPMX20_03770at 3973.388 kb on + strand, within MPMX20_03770at 3973.417 kb on + strand, within MPMX20_03770at 3973.470 kb on + strand, within MPMX20_03770at 3973.547 kb on + strand, within MPMX20_03770at 3973.547 kb on + strand, within MPMX20_03770at 3973.555 kb on - strand, within MPMX20_03770at 3973.557 kb on - strand, within MPMX20_03770at 3973.639 kb on + strand, within MPMX20_03770at 3973.762 kb on + strand, within MPMX20_03770at 3973.767 kb on + strand, within MPMX20_03770at 3973.841 kb on - strandat 3973.885 kb on - strandat 3973.885 kb on - strandat 3973.916 kb on - strandat 3973.935 kb on - strandat 3973.938 kb on + strandat 3973.946 kb on - strandat 3973.977 kb on - strandat 3974.003 kb on - strandat 3974.006 kb on + strandat 3974.014 kb on - strandat 3974.103 kb on - strand, within MPMX20_03771at 3974.134 kb on - strand, within MPMX20_03771at 3974.177 kb on - strand, within MPMX20_03771at 3974.177 kb on - strand, within MPMX20_03771at 3974.222 kb on + strand, within MPMX20_03771at 3974.292 kb on + strand, within MPMX20_03771at 3974.292 kb on + strand, within MPMX20_03771at 3974.300 kb on - strand, within MPMX20_03771at 3974.300 kb on - strand, within MPMX20_03771at 3974.307 kb on - strand, within MPMX20_03771at 3974.331 kb on - strand, within MPMX20_03771at 3974.396 kb on - strand, within MPMX20_03771at 3974.449 kb on - strand, within MPMX20_03771at 3974.454 kb on - strand, within MPMX20_03771at 3974.460 kb on + strand, within MPMX20_03771at 3974.510 kb on - strand, within MPMX20_03771at 3974.510 kb on - strand, within MPMX20_03771at 3974.535 kb on + strand, within MPMX20_03771at 3974.543 kb on - strand, within MPMX20_03771at 3974.545 kb on + strand, within MPMX20_03771at 3974.561 kb on + strand, within MPMX20_03771at 3974.561 kb on + strand, within MPMX20_03771at 3974.561 kb on + strand, within MPMX20_03771at 3974.642 kb on + strand, within MPMX20_03771at 3974.652 kb on + strand, within MPMX20_03771at 3974.785 kb on + strand, within MPMX20_03771at 3974.793 kb on - strand, within MPMX20_03771at 3974.832 kb on - strand, within MPMX20_03771at 3974.870 kb on - strand, within MPMX20_03771at 3974.926 kb on + strand, within MPMX20_03771at 3974.940 kb on + strand, within MPMX20_03771at 3975.007 kb on - strand, within MPMX20_03771at 3975.034 kb on + strandat 3975.047 kb on + strandat 3975.088 kb on - strandat 3975.145 kb on + strandat 3975.191 kb on + strandat 3975.383 kb on + strandat 3975.388 kb on + strandat 3975.393 kb on + strandat 3975.401 kb on - strandat 3975.425 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C)
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3,972,910 + MPMX20_03769 0.70 +1.0
3,972,910 + MPMX20_03769 0.70 -0.4
3,972,918 - MPMX20_03769 0.73 +0.6
3,972,918 - MPMX20_03769 0.73 +0.1
3,972,953 + MPMX20_03769 0.83 -0.5
3,972,961 - MPMX20_03769 0.86 -0.6
3,973,088 - +0.0
3,973,207 - +0.9
3,973,342 - MPMX20_03770 0.14 -0.6
3,973,388 + MPMX20_03770 0.22 -0.1
3,973,417 + MPMX20_03770 0.27 -0.3
3,973,470 + MPMX20_03770 0.36 -0.6
3,973,547 + MPMX20_03770 0.48 -0.5
3,973,547 + MPMX20_03770 0.48 -0.3
3,973,555 - MPMX20_03770 0.50 -2.2
3,973,557 - MPMX20_03770 0.50 -1.2
3,973,639 + MPMX20_03770 0.64 +0.5
3,973,762 + MPMX20_03770 0.84 -1.8
3,973,767 + MPMX20_03770 0.85 -1.2
3,973,841 - -0.2
3,973,885 - +0.7
3,973,885 - -0.4
3,973,916 - -2.5
3,973,935 - -1.8
3,973,938 + -4.1
3,973,946 - -2.3
3,973,977 - -3.3
3,974,003 - -3.4
3,974,006 + -0.5
3,974,014 - -4.7
3,974,103 - MPMX20_03771 0.16 -3.9
3,974,134 - MPMX20_03771 0.19 -2.8
3,974,177 - MPMX20_03771 0.22 -1.6
3,974,177 - MPMX20_03771 0.22 -5.1
3,974,222 + MPMX20_03771 0.26 -3.9
3,974,292 + MPMX20_03771 0.32 -4.5
3,974,292 + MPMX20_03771 0.32 -2.9
3,974,300 - MPMX20_03771 0.32 -5.0
3,974,300 - MPMX20_03771 0.32 -3.9
3,974,307 - MPMX20_03771 0.33 -5.9
3,974,331 - MPMX20_03771 0.35 -3.8
3,974,396 - MPMX20_03771 0.40 -2.7
3,974,449 - MPMX20_03771 0.45 -3.2
3,974,454 - MPMX20_03771 0.45 -4.1
3,974,460 + MPMX20_03771 0.45 -2.4
3,974,510 - MPMX20_03771 0.49 -1.0
3,974,510 - MPMX20_03771 0.49 -1.5
3,974,535 + MPMX20_03771 0.52 -1.9
3,974,543 - MPMX20_03771 0.52 -4.5
3,974,545 + MPMX20_03771 0.52 -2.9
3,974,561 + MPMX20_03771 0.54 -5.1
3,974,561 + MPMX20_03771 0.54 -2.3
3,974,561 + MPMX20_03771 0.54 -1.2
3,974,642 + MPMX20_03771 0.60 -1.0
3,974,652 + MPMX20_03771 0.61 -3.5
3,974,785 + MPMX20_03771 0.72 -3.0
3,974,793 - MPMX20_03771 0.72 -4.5
3,974,832 - MPMX20_03771 0.76 -4.3
3,974,870 - MPMX20_03771 0.79 -4.8
3,974,926 + MPMX20_03771 0.83 -3.6
3,974,940 + MPMX20_03771 0.84 -5.3
3,975,007 - MPMX20_03771 0.90 -5.1
3,975,034 + -2.2
3,975,047 + -1.4
3,975,088 - -3.3
3,975,145 + -2.5
3,975,191 + -1.0
3,975,383 + -0.1
3,975,388 + -0.3
3,975,393 + +0.5
3,975,401 - -0.0
3,975,425 - +0.3

Or see this region's nucleotide sequence