Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03498

Experiment: Tween 20 (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03496 and MPMX20_03497 are separated by 69 nucleotidesMPMX20_03497 and MPMX20_03498 are separated by 5 nucleotidesMPMX20_03498 and MPMX20_03499 are separated by 2 nucleotides MPMX20_03496: MPMX20_03496 - Citrate/malate transporter, at 3,682,301 to 3,683,644 _03496 MPMX20_03497: MPMX20_03497 - hypothetical protein, at 3,683,714 to 3,684,559 _03497 MPMX20_03498: MPMX20_03498 - 3-isopropylmalate dehydratase small subunit 1, at 3,684,565 to 3,685,191 _03498 MPMX20_03499: MPMX20_03499 - 3-isopropylmalate dehydratase large subunit 1, at 3,685,194 to 3,686,621 _03499 Position (kb) 3684 3685 3686Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3684.066 kb on - strand, within MPMX20_03497at 3685.064 kb on - strand, within MPMX20_03498at 3685.071 kb on - strand, within MPMX20_03498at 3685.098 kb on - strand, within MPMX20_03498at 3685.098 kb on - strand, within MPMX20_03498at 3685.123 kb on - strand, within MPMX20_03498at 3685.128 kb on - strand, within MPMX20_03498at 3685.128 kb on - strand, within MPMX20_03498at 3685.138 kb on - strandat 3685.158 kb on - strandat 3685.158 kb on - strandat 3685.167 kb on - strandat 3685.167 kb on - strandat 3685.200 kb on - strandat 3685.218 kb on - strandat 3685.237 kb on - strandat 3685.239 kb on - strandat 3685.239 kb on - strandat 3685.239 kb on - strandat 3685.247 kb on - strandat 3685.257 kb on + strandat 3685.264 kb on - strandat 3685.264 kb on - strandat 3685.264 kb on - strandat 3685.264 kb on - strandat 3685.274 kb on - strandat 3685.274 kb on - strandat 3685.274 kb on - strandat 3685.274 kb on - strandat 3685.274 kb on - strandat 3685.274 kb on - strandat 3685.274 kb on - strandat 3685.291 kb on + strandat 3685.293 kb on - strandat 3685.299 kb on - strandat 3685.339 kb on + strand, within MPMX20_03499at 3685.339 kb on + strand, within MPMX20_03499at 3685.339 kb on + strand, within MPMX20_03499at 3685.347 kb on - strand, within MPMX20_03499at 3685.347 kb on - strand, within MPMX20_03499at 3685.347 kb on - strand, within MPMX20_03499at 3685.347 kb on - strand, within MPMX20_03499at 3685.362 kb on - strand, within MPMX20_03499at 3685.367 kb on - strand, within MPMX20_03499at 3685.381 kb on - strand, within MPMX20_03499at 3685.381 kb on - strand, within MPMX20_03499at 3685.381 kb on - strand, within MPMX20_03499at 3685.381 kb on - strand, within MPMX20_03499at 3685.381 kb on - strand, within MPMX20_03499at 3685.442 kb on - strand, within MPMX20_03499at 3685.442 kb on - strand, within MPMX20_03499at 3685.442 kb on - strand, within MPMX20_03499at 3685.442 kb on - strand, within MPMX20_03499at 3685.455 kb on + strand, within MPMX20_03499at 3685.455 kb on + strand, within MPMX20_03499at 3685.455 kb on + strand, within MPMX20_03499at 3685.455 kb on + strand, within MPMX20_03499at 3685.455 kb on + strand, within MPMX20_03499at 3685.457 kb on + strand, within MPMX20_03499at 3685.457 kb on + strand, within MPMX20_03499at 3685.457 kb on + strand, within MPMX20_03499at 3685.457 kb on + strand, within MPMX20_03499at 3685.457 kb on + strand, within MPMX20_03499at 3685.460 kb on + strand, within MPMX20_03499at 3685.460 kb on + strand, within MPMX20_03499at 3685.460 kb on + strand, within MPMX20_03499at 3685.461 kb on + strand, within MPMX20_03499at 3685.463 kb on - strand, within MPMX20_03499at 3685.463 kb on - strand, within MPMX20_03499at 3685.463 kb on - strand, within MPMX20_03499at 3685.463 kb on - strand, within MPMX20_03499at 3685.463 kb on - strand, within MPMX20_03499at 3685.463 kb on - strand, within MPMX20_03499at 3685.463 kb on - strand, within MPMX20_03499at 3685.463 kb on - strand, within MPMX20_03499at 3685.463 kb on - strand, within MPMX20_03499at 3685.465 kb on + strand, within MPMX20_03499at 3685.465 kb on + strand, within MPMX20_03499at 3685.465 kb on + strand, within MPMX20_03499at 3685.465 kb on - strand, within MPMX20_03499at 3685.465 kb on - strand, within MPMX20_03499at 3685.465 kb on - strand, within MPMX20_03499at 3685.465 kb on - strand, within MPMX20_03499at 3685.468 kb on - strand, within MPMX20_03499at 3685.468 kb on - strand, within MPMX20_03499at 3685.468 kb on - strand, within MPMX20_03499at 3685.479 kb on - strand, within MPMX20_03499at 3685.483 kb on - strand, within MPMX20_03499at 3685.493 kb on - strand, within MPMX20_03499at 3685.521 kb on - strand, within MPMX20_03499at 3685.527 kb on - strand, within MPMX20_03499at 3685.604 kb on + strand, within MPMX20_03499at 3685.629 kb on + strand, within MPMX20_03499at 3685.629 kb on + strand, within MPMX20_03499at 3685.629 kb on - strand, within MPMX20_03499at 3685.637 kb on - strand, within MPMX20_03499at 3685.650 kb on - strand, within MPMX20_03499at 3685.664 kb on + strand, within MPMX20_03499at 3685.682 kb on + strand, within MPMX20_03499at 3685.687 kb on + strand, within MPMX20_03499at 3685.687 kb on + strand, within MPMX20_03499at 3685.687 kb on + strand, within MPMX20_03499at 3685.695 kb on - strand, within MPMX20_03499at 3685.695 kb on - strand, within MPMX20_03499at 3685.705 kb on + strand, within MPMX20_03499at 3685.705 kb on + strand, within MPMX20_03499at 3685.705 kb on - strand, within MPMX20_03499at 3685.709 kb on - strand, within MPMX20_03499at 3685.713 kb on - strand, within MPMX20_03499at 3685.713 kb on - strand, within MPMX20_03499at 3685.715 kb on + strand, within MPMX20_03499at 3685.715 kb on + strand, within MPMX20_03499at 3685.715 kb on + strand, within MPMX20_03499at 3685.718 kb on - strand, within MPMX20_03499at 3685.719 kb on - strand, within MPMX20_03499at 3685.720 kb on + strand, within MPMX20_03499at 3685.720 kb on + strand, within MPMX20_03499at 3685.720 kb on + strand, within MPMX20_03499at 3685.723 kb on - strand, within MPMX20_03499at 3685.728 kb on - strand, within MPMX20_03499at 3685.744 kb on + strand, within MPMX20_03499at 3685.752 kb on - strand, within MPMX20_03499at 3685.752 kb on - strand, within MPMX20_03499at 3685.754 kb on + strand, within MPMX20_03499at 3685.757 kb on - strand, within MPMX20_03499at 3685.762 kb on - strand, within MPMX20_03499at 3685.762 kb on - strand, within MPMX20_03499at 3685.762 kb on - strand, within MPMX20_03499at 3685.762 kb on - strand, within MPMX20_03499at 3685.762 kb on - strand, within MPMX20_03499at 3685.764 kb on + strand, within MPMX20_03499at 3685.798 kb on - strand, within MPMX20_03499at 3685.800 kb on + strand, within MPMX20_03499at 3685.816 kb on - strand, within MPMX20_03499at 3685.818 kb on + strand, within MPMX20_03499at 3685.818 kb on + strand, within MPMX20_03499at 3685.823 kb on + strand, within MPMX20_03499at 3685.823 kb on + strand, within MPMX20_03499at 3685.826 kb on - strand, within MPMX20_03499at 3685.826 kb on - strand, within MPMX20_03499at 3685.831 kb on - strand, within MPMX20_03499at 3685.831 kb on - strand, within MPMX20_03499at 3685.867 kb on + strand, within MPMX20_03499at 3685.872 kb on - strand, within MPMX20_03499at 3685.875 kb on - strand, within MPMX20_03499at 3685.912 kb on - strand, within MPMX20_03499at 3685.914 kb on + strand, within MPMX20_03499at 3685.917 kb on + strand, within MPMX20_03499at 3685.958 kb on + strand, within MPMX20_03499at 3685.958 kb on + strand, within MPMX20_03499at 3685.958 kb on + strand, within MPMX20_03499at 3685.958 kb on + strand, within MPMX20_03499at 3685.958 kb on + strand, within MPMX20_03499at 3685.966 kb on - strand, within MPMX20_03499at 3685.994 kb on + strand, within MPMX20_03499at 3686.018 kb on + strand, within MPMX20_03499at 3686.026 kb on - strand, within MPMX20_03499at 3686.026 kb on - strand, within MPMX20_03499at 3686.064 kb on + strand, within MPMX20_03499at 3686.069 kb on + strand, within MPMX20_03499at 3686.069 kb on + strand, within MPMX20_03499at 3686.072 kb on - strand, within MPMX20_03499at 3686.072 kb on - strand, within MPMX20_03499at 3686.072 kb on - strand, within MPMX20_03499at 3686.072 kb on - strand, within MPMX20_03499at 3686.174 kb on - strand, within MPMX20_03499at 3686.178 kb on + strand, within MPMX20_03499

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C)
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3,684,066 - MPMX20_03497 0.42 +1.4
3,685,064 - MPMX20_03498 0.80 -2.9
3,685,071 - MPMX20_03498 0.81 -0.7
3,685,098 - MPMX20_03498 0.85 -2.2
3,685,098 - MPMX20_03498 0.85 -0.5
3,685,123 - MPMX20_03498 0.89 -0.4
3,685,128 - MPMX20_03498 0.90 -1.9
3,685,128 - MPMX20_03498 0.90 -0.2
3,685,138 - -1.4
3,685,158 - +0.0
3,685,158 - +0.5
3,685,167 - +0.3
3,685,167 - -2.3
3,685,200 - +0.2
3,685,218 - +0.7
3,685,237 - +0.4
3,685,239 - -0.7
3,685,239 - -0.1
3,685,239 - +0.7
3,685,247 - -0.2
3,685,257 + -0.7
3,685,264 - +1.2
3,685,264 - -1.2
3,685,264 - +0.2
3,685,264 - +0.3
3,685,274 - +0.6
3,685,274 - -0.4
3,685,274 - -0.0
3,685,274 - -0.7
3,685,274 - -0.9
3,685,274 - +0.3
3,685,274 - -0.9
3,685,291 + +0.9
3,685,293 - -0.1
3,685,299 - +0.2
3,685,339 + MPMX20_03499 0.10 -2.5
3,685,339 + MPMX20_03499 0.10 -2.8
3,685,339 + MPMX20_03499 0.10 -0.7
3,685,347 - MPMX20_03499 0.11 +0.3
3,685,347 - MPMX20_03499 0.11 +0.3
3,685,347 - MPMX20_03499 0.11 -0.9
3,685,347 - MPMX20_03499 0.11 +0.6
3,685,362 - MPMX20_03499 0.12 -1.0
3,685,367 - MPMX20_03499 0.12 -1.2
3,685,381 - MPMX20_03499 0.13 +0.3
3,685,381 - MPMX20_03499 0.13 -0.0
3,685,381 - MPMX20_03499 0.13 +0.3
3,685,381 - MPMX20_03499 0.13 +0.6
3,685,381 - MPMX20_03499 0.13 +0.3
3,685,442 - MPMX20_03499 0.17 +0.3
3,685,442 - MPMX20_03499 0.17 +0.2
3,685,442 - MPMX20_03499 0.17 +0.8
3,685,442 - MPMX20_03499 0.17 -2.0
3,685,455 + MPMX20_03499 0.18 -0.6
3,685,455 + MPMX20_03499 0.18 -0.4
3,685,455 + MPMX20_03499 0.18 -1.2
3,685,455 + MPMX20_03499 0.18 -0.7
3,685,455 + MPMX20_03499 0.18 -0.5
3,685,457 + MPMX20_03499 0.18 +0.3
3,685,457 + MPMX20_03499 0.18 -0.5
3,685,457 + MPMX20_03499 0.18 -0.8
3,685,457 + MPMX20_03499 0.18 -1.7
3,685,457 + MPMX20_03499 0.18 +0.1
3,685,460 + MPMX20_03499 0.19 +0.1
3,685,460 + MPMX20_03499 0.19 -0.6
3,685,460 + MPMX20_03499 0.19 +1.6
3,685,461 + MPMX20_03499 0.19 +0.8
3,685,463 - MPMX20_03499 0.19 -1.9
3,685,463 - MPMX20_03499 0.19 -0.2
3,685,463 - MPMX20_03499 0.19 -1.3
3,685,463 - MPMX20_03499 0.19 +0.3
3,685,463 - MPMX20_03499 0.19 -0.0
3,685,463 - MPMX20_03499 0.19 +1.2
3,685,463 - MPMX20_03499 0.19 -0.5
3,685,463 - MPMX20_03499 0.19 +0.4
3,685,463 - MPMX20_03499 0.19 +0.3
3,685,465 + MPMX20_03499 0.19 +0.0
3,685,465 + MPMX20_03499 0.19 -1.4
3,685,465 + MPMX20_03499 0.19 -1.5
3,685,465 - MPMX20_03499 0.19 -0.6
3,685,465 - MPMX20_03499 0.19 +0.5
3,685,465 - MPMX20_03499 0.19 -0.3
3,685,465 - MPMX20_03499 0.19 +0.4
3,685,468 - MPMX20_03499 0.19 -0.7
3,685,468 - MPMX20_03499 0.19 -1.5
3,685,468 - MPMX20_03499 0.19 -0.9
3,685,479 - MPMX20_03499 0.20 -0.7
3,685,483 - MPMX20_03499 0.20 -0.2
3,685,493 - MPMX20_03499 0.21 +0.4
3,685,521 - MPMX20_03499 0.23 -1.1
3,685,527 - MPMX20_03499 0.23 -1.1
3,685,604 + MPMX20_03499 0.29 -1.2
3,685,629 + MPMX20_03499 0.30 +0.3
3,685,629 + MPMX20_03499 0.30 +0.4
3,685,629 - MPMX20_03499 0.30 -0.0
3,685,637 - MPMX20_03499 0.31 -0.2
3,685,650 - MPMX20_03499 0.32 -0.4
3,685,664 + MPMX20_03499 0.33 -1.0
3,685,682 + MPMX20_03499 0.34 -0.0
3,685,687 + MPMX20_03499 0.35 +0.2
3,685,687 + MPMX20_03499 0.35 -0.1
3,685,687 + MPMX20_03499 0.35 -0.2
3,685,695 - MPMX20_03499 0.35 -0.5
3,685,695 - MPMX20_03499 0.35 +0.5
3,685,705 + MPMX20_03499 0.36 +1.0
3,685,705 + MPMX20_03499 0.36 -0.4
3,685,705 - MPMX20_03499 0.36 -0.9
3,685,709 - MPMX20_03499 0.36 -1.9
3,685,713 - MPMX20_03499 0.36 +1.6
3,685,713 - MPMX20_03499 0.36 +0.2
3,685,715 + MPMX20_03499 0.36 +0.6
3,685,715 + MPMX20_03499 0.36 +0.1
3,685,715 + MPMX20_03499 0.36 -0.3
3,685,718 - MPMX20_03499 0.37 +0.1
3,685,719 - MPMX20_03499 0.37 -0.6
3,685,720 + MPMX20_03499 0.37 -1.4
3,685,720 + MPMX20_03499 0.37 -2.3
3,685,720 + MPMX20_03499 0.37 +0.0
3,685,723 - MPMX20_03499 0.37 +0.3
3,685,728 - MPMX20_03499 0.37 +0.1
3,685,744 + MPMX20_03499 0.39 +0.9
3,685,752 - MPMX20_03499 0.39 -0.6
3,685,752 - MPMX20_03499 0.39 +0.4
3,685,754 + MPMX20_03499 0.39 -0.5
3,685,757 - MPMX20_03499 0.39 -0.6
3,685,762 - MPMX20_03499 0.40 +0.5
3,685,762 - MPMX20_03499 0.40 +0.1
3,685,762 - MPMX20_03499 0.40 +1.3
3,685,762 - MPMX20_03499 0.40 -0.2
3,685,762 - MPMX20_03499 0.40 -0.1
3,685,764 + MPMX20_03499 0.40 -1.0
3,685,798 - MPMX20_03499 0.42 -0.7
3,685,800 + MPMX20_03499 0.42 +0.1
3,685,816 - MPMX20_03499 0.44 +0.4
3,685,818 + MPMX20_03499 0.44 -0.2
3,685,818 + MPMX20_03499 0.44 -0.3
3,685,823 + MPMX20_03499 0.44 -0.4
3,685,823 + MPMX20_03499 0.44 -0.5
3,685,826 - MPMX20_03499 0.44 -1.5
3,685,826 - MPMX20_03499 0.44 +0.3
3,685,831 - MPMX20_03499 0.45 -0.1
3,685,831 - MPMX20_03499 0.45 +0.4
3,685,867 + MPMX20_03499 0.47 -0.9
3,685,872 - MPMX20_03499 0.47 -0.0
3,685,875 - MPMX20_03499 0.48 -0.0
3,685,912 - MPMX20_03499 0.50 +2.6
3,685,914 + MPMX20_03499 0.50 +0.2
3,685,917 + MPMX20_03499 0.51 -0.7
3,685,958 + MPMX20_03499 0.54 -1.5
3,685,958 + MPMX20_03499 0.54 +0.3
3,685,958 + MPMX20_03499 0.54 +0.5
3,685,958 + MPMX20_03499 0.54 +0.2
3,685,958 + MPMX20_03499 0.54 +0.2
3,685,966 - MPMX20_03499 0.54 -0.5
3,685,994 + MPMX20_03499 0.56 +1.6
3,686,018 + MPMX20_03499 0.58 +0.2
3,686,026 - MPMX20_03499 0.58 -0.5
3,686,026 - MPMX20_03499 0.58 +0.4
3,686,064 + MPMX20_03499 0.61 +0.1
3,686,069 + MPMX20_03499 0.61 +1.0
3,686,069 + MPMX20_03499 0.61 -0.7
3,686,072 - MPMX20_03499 0.61 +0.2
3,686,072 - MPMX20_03499 0.61 +0.2
3,686,072 - MPMX20_03499 0.61 -0.4
3,686,072 - MPMX20_03499 0.61 +0.4
3,686,174 - MPMX20_03499 0.69 -0.7
3,686,178 + MPMX20_03499 0.69 +1.4

Or see this region's nucleotide sequence