Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03496 and MPMX20_03497 are separated by 69 nucleotides MPMX20_03497 and MPMX20_03498 are separated by 5 nucleotides MPMX20_03498 and MPMX20_03499 are separated by 2 nucleotides
MPMX20_03496: MPMX20_03496 - Citrate/malate transporter, at 3,682,301 to 3,683,644
_03496
MPMX20_03497: MPMX20_03497 - hypothetical protein, at 3,683,714 to 3,684,559
_03497
MPMX20_03498: MPMX20_03498 - 3-isopropylmalate dehydratase small subunit 1, at 3,684,565 to 3,685,191
_03498
MPMX20_03499: MPMX20_03499 - 3-isopropylmalate dehydratase large subunit 1, at 3,685,194 to 3,686,621
_03499
Position (kb)
3684
3685
3686 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3684.066 kb on - strand, within MPMX20_03497 at 3685.064 kb on - strand, within MPMX20_03498 at 3685.071 kb on - strand, within MPMX20_03498 at 3685.098 kb on - strand, within MPMX20_03498 at 3685.098 kb on - strand, within MPMX20_03498 at 3685.123 kb on - strand, within MPMX20_03498 at 3685.128 kb on - strand, within MPMX20_03498 at 3685.128 kb on - strand, within MPMX20_03498 at 3685.138 kb on - strand at 3685.158 kb on - strand at 3685.158 kb on - strand at 3685.167 kb on - strand at 3685.167 kb on - strand at 3685.200 kb on - strand at 3685.218 kb on - strand at 3685.237 kb on - strand at 3685.239 kb on - strand at 3685.239 kb on - strand at 3685.239 kb on - strand at 3685.247 kb on - strand at 3685.257 kb on + strand at 3685.264 kb on - strand at 3685.264 kb on - strand at 3685.264 kb on - strand at 3685.264 kb on - strand at 3685.274 kb on - strand at 3685.274 kb on - strand at 3685.274 kb on - strand at 3685.274 kb on - strand at 3685.274 kb on - strand at 3685.274 kb on - strand at 3685.274 kb on - strand at 3685.291 kb on + strand at 3685.293 kb on - strand at 3685.299 kb on - strand at 3685.339 kb on + strand, within MPMX20_03499 at 3685.339 kb on + strand, within MPMX20_03499 at 3685.339 kb on + strand, within MPMX20_03499 at 3685.347 kb on - strand, within MPMX20_03499 at 3685.347 kb on - strand, within MPMX20_03499 at 3685.347 kb on - strand, within MPMX20_03499 at 3685.347 kb on - strand, within MPMX20_03499 at 3685.362 kb on - strand, within MPMX20_03499 at 3685.367 kb on - strand, within MPMX20_03499 at 3685.381 kb on - strand, within MPMX20_03499 at 3685.381 kb on - strand, within MPMX20_03499 at 3685.381 kb on - strand, within MPMX20_03499 at 3685.381 kb on - strand, within MPMX20_03499 at 3685.381 kb on - strand, within MPMX20_03499 at 3685.442 kb on - strand, within MPMX20_03499 at 3685.442 kb on - strand, within MPMX20_03499 at 3685.442 kb on - strand, within MPMX20_03499 at 3685.442 kb on - strand, within MPMX20_03499 at 3685.455 kb on + strand, within MPMX20_03499 at 3685.455 kb on + strand, within MPMX20_03499 at 3685.455 kb on + strand, within MPMX20_03499 at 3685.455 kb on + strand, within MPMX20_03499 at 3685.455 kb on + strand, within MPMX20_03499 at 3685.457 kb on + strand, within MPMX20_03499 at 3685.457 kb on + strand, within MPMX20_03499 at 3685.457 kb on + strand, within MPMX20_03499 at 3685.457 kb on + strand, within MPMX20_03499 at 3685.457 kb on + strand, within MPMX20_03499 at 3685.460 kb on + strand, within MPMX20_03499 at 3685.460 kb on + strand, within MPMX20_03499 at 3685.460 kb on + strand, within MPMX20_03499 at 3685.461 kb on + strand, within MPMX20_03499 at 3685.463 kb on - strand, within MPMX20_03499 at 3685.463 kb on - strand, within MPMX20_03499 at 3685.463 kb on - strand, within MPMX20_03499 at 3685.463 kb on - strand, within MPMX20_03499 at 3685.463 kb on - strand, within MPMX20_03499 at 3685.463 kb on - strand, within MPMX20_03499 at 3685.463 kb on - strand, within MPMX20_03499 at 3685.463 kb on - strand, within MPMX20_03499 at 3685.463 kb on - strand, within MPMX20_03499 at 3685.465 kb on + strand, within MPMX20_03499 at 3685.465 kb on + strand, within MPMX20_03499 at 3685.465 kb on + strand, within MPMX20_03499 at 3685.465 kb on - strand, within MPMX20_03499 at 3685.465 kb on - strand, within MPMX20_03499 at 3685.465 kb on - strand, within MPMX20_03499 at 3685.465 kb on - strand, within MPMX20_03499 at 3685.468 kb on - strand, within MPMX20_03499 at 3685.468 kb on - strand, within MPMX20_03499 at 3685.468 kb on - strand, within MPMX20_03499 at 3685.479 kb on - strand, within MPMX20_03499 at 3685.483 kb on - strand, within MPMX20_03499 at 3685.493 kb on - strand, within MPMX20_03499 at 3685.521 kb on - strand, within MPMX20_03499 at 3685.527 kb on - strand, within MPMX20_03499 at 3685.604 kb on + strand, within MPMX20_03499 at 3685.629 kb on + strand, within MPMX20_03499 at 3685.629 kb on + strand, within MPMX20_03499 at 3685.629 kb on - strand, within MPMX20_03499 at 3685.637 kb on - strand, within MPMX20_03499 at 3685.650 kb on - strand, within MPMX20_03499 at 3685.664 kb on + strand, within MPMX20_03499 at 3685.682 kb on + strand, within MPMX20_03499 at 3685.687 kb on + strand, within MPMX20_03499 at 3685.687 kb on + strand, within MPMX20_03499 at 3685.687 kb on + strand, within MPMX20_03499 at 3685.695 kb on - strand, within MPMX20_03499 at 3685.695 kb on - strand, within MPMX20_03499 at 3685.705 kb on + strand, within MPMX20_03499 at 3685.705 kb on + strand, within MPMX20_03499 at 3685.705 kb on - strand, within MPMX20_03499 at 3685.709 kb on - strand, within MPMX20_03499 at 3685.713 kb on - strand, within MPMX20_03499 at 3685.713 kb on - strand, within MPMX20_03499 at 3685.715 kb on + strand, within MPMX20_03499 at 3685.715 kb on + strand, within MPMX20_03499 at 3685.715 kb on + strand, within MPMX20_03499 at 3685.718 kb on - strand, within MPMX20_03499 at 3685.719 kb on - strand, within MPMX20_03499 at 3685.720 kb on + strand, within MPMX20_03499 at 3685.720 kb on + strand, within MPMX20_03499 at 3685.720 kb on + strand, within MPMX20_03499 at 3685.723 kb on - strand, within MPMX20_03499 at 3685.728 kb on - strand, within MPMX20_03499 at 3685.744 kb on + strand, within MPMX20_03499 at 3685.752 kb on - strand, within MPMX20_03499 at 3685.752 kb on - strand, within MPMX20_03499 at 3685.754 kb on + strand, within MPMX20_03499 at 3685.757 kb on - strand, within MPMX20_03499 at 3685.762 kb on - strand, within MPMX20_03499 at 3685.762 kb on - strand, within MPMX20_03499 at 3685.762 kb on - strand, within MPMX20_03499 at 3685.762 kb on - strand, within MPMX20_03499 at 3685.762 kb on - strand, within MPMX20_03499 at 3685.764 kb on + strand, within MPMX20_03499 at 3685.798 kb on - strand, within MPMX20_03499 at 3685.800 kb on + strand, within MPMX20_03499 at 3685.816 kb on - strand, within MPMX20_03499 at 3685.818 kb on + strand, within MPMX20_03499 at 3685.818 kb on + strand, within MPMX20_03499 at 3685.823 kb on + strand, within MPMX20_03499 at 3685.823 kb on + strand, within MPMX20_03499 at 3685.826 kb on - strand, within MPMX20_03499 at 3685.826 kb on - strand, within MPMX20_03499 at 3685.831 kb on - strand, within MPMX20_03499 at 3685.831 kb on - strand, within MPMX20_03499 at 3685.867 kb on + strand, within MPMX20_03499 at 3685.872 kb on - strand, within MPMX20_03499 at 3685.875 kb on - strand, within MPMX20_03499 at 3685.912 kb on - strand, within MPMX20_03499 at 3685.914 kb on + strand, within MPMX20_03499 at 3685.917 kb on + strand, within MPMX20_03499 at 3685.958 kb on + strand, within MPMX20_03499 at 3685.958 kb on + strand, within MPMX20_03499 at 3685.958 kb on + strand, within MPMX20_03499 at 3685.958 kb on + strand, within MPMX20_03499 at 3685.958 kb on + strand, within MPMX20_03499 at 3685.966 kb on - strand, within MPMX20_03499 at 3685.994 kb on + strand, within MPMX20_03499 at 3686.018 kb on + strand, within MPMX20_03499 at 3686.026 kb on - strand, within MPMX20_03499 at 3686.026 kb on - strand, within MPMX20_03499 at 3686.064 kb on + strand, within MPMX20_03499 at 3686.069 kb on + strand, within MPMX20_03499 at 3686.069 kb on + strand, within MPMX20_03499 at 3686.072 kb on - strand, within MPMX20_03499 at 3686.072 kb on - strand, within MPMX20_03499 at 3686.072 kb on - strand, within MPMX20_03499 at 3686.072 kb on - strand, within MPMX20_03499 at 3686.174 kb on - strand, within MPMX20_03499 at 3686.178 kb on + strand, within MPMX20_03499
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 3,684,066 - MPMX20_03497 0.42 +1.4 3,685,064 - MPMX20_03498 0.80 -2.9 3,685,071 - MPMX20_03498 0.81 -0.7 3,685,098 - MPMX20_03498 0.85 -2.2 3,685,098 - MPMX20_03498 0.85 -0.5 3,685,123 - MPMX20_03498 0.89 -0.4 3,685,128 - MPMX20_03498 0.90 -1.9 3,685,128 - MPMX20_03498 0.90 -0.2 3,685,138 - -1.4 3,685,158 - +0.0 3,685,158 - +0.5 3,685,167 - +0.3 3,685,167 - -2.3 3,685,200 - +0.2 3,685,218 - +0.7 3,685,237 - +0.4 3,685,239 - -0.7 3,685,239 - -0.1 3,685,239 - +0.7 3,685,247 - -0.2 3,685,257 + -0.7 3,685,264 - +1.2 3,685,264 - -1.2 3,685,264 - +0.2 3,685,264 - +0.3 3,685,274 - +0.6 3,685,274 - -0.4 3,685,274 - -0.0 3,685,274 - -0.7 3,685,274 - -0.9 3,685,274 - +0.3 3,685,274 - -0.9 3,685,291 + +0.9 3,685,293 - -0.1 3,685,299 - +0.2 3,685,339 + MPMX20_03499 0.10 -2.5 3,685,339 + MPMX20_03499 0.10 -2.8 3,685,339 + MPMX20_03499 0.10 -0.7 3,685,347 - MPMX20_03499 0.11 +0.3 3,685,347 - MPMX20_03499 0.11 +0.3 3,685,347 - MPMX20_03499 0.11 -0.9 3,685,347 - MPMX20_03499 0.11 +0.6 3,685,362 - MPMX20_03499 0.12 -1.0 3,685,367 - MPMX20_03499 0.12 -1.2 3,685,381 - MPMX20_03499 0.13 +0.3 3,685,381 - MPMX20_03499 0.13 -0.0 3,685,381 - MPMX20_03499 0.13 +0.3 3,685,381 - MPMX20_03499 0.13 +0.6 3,685,381 - MPMX20_03499 0.13 +0.3 3,685,442 - MPMX20_03499 0.17 +0.3 3,685,442 - MPMX20_03499 0.17 +0.2 3,685,442 - MPMX20_03499 0.17 +0.8 3,685,442 - MPMX20_03499 0.17 -2.0 3,685,455 + MPMX20_03499 0.18 -0.6 3,685,455 + MPMX20_03499 0.18 -0.4 3,685,455 + MPMX20_03499 0.18 -1.2 3,685,455 + MPMX20_03499 0.18 -0.7 3,685,455 + MPMX20_03499 0.18 -0.5 3,685,457 + MPMX20_03499 0.18 +0.3 3,685,457 + MPMX20_03499 0.18 -0.5 3,685,457 + MPMX20_03499 0.18 -0.8 3,685,457 + MPMX20_03499 0.18 -1.7 3,685,457 + MPMX20_03499 0.18 +0.1 3,685,460 + MPMX20_03499 0.19 +0.1 3,685,460 + MPMX20_03499 0.19 -0.6 3,685,460 + MPMX20_03499 0.19 +1.6 3,685,461 + MPMX20_03499 0.19 +0.8 3,685,463 - MPMX20_03499 0.19 -1.9 3,685,463 - MPMX20_03499 0.19 -0.2 3,685,463 - MPMX20_03499 0.19 -1.3 3,685,463 - MPMX20_03499 0.19 +0.3 3,685,463 - MPMX20_03499 0.19 -0.0 3,685,463 - MPMX20_03499 0.19 +1.2 3,685,463 - MPMX20_03499 0.19 -0.5 3,685,463 - MPMX20_03499 0.19 +0.4 3,685,463 - MPMX20_03499 0.19 +0.3 3,685,465 + MPMX20_03499 0.19 +0.0 3,685,465 + MPMX20_03499 0.19 -1.4 3,685,465 + MPMX20_03499 0.19 -1.5 3,685,465 - MPMX20_03499 0.19 -0.6 3,685,465 - MPMX20_03499 0.19 +0.5 3,685,465 - MPMX20_03499 0.19 -0.3 3,685,465 - MPMX20_03499 0.19 +0.4 3,685,468 - MPMX20_03499 0.19 -0.7 3,685,468 - MPMX20_03499 0.19 -1.5 3,685,468 - MPMX20_03499 0.19 -0.9 3,685,479 - MPMX20_03499 0.20 -0.7 3,685,483 - MPMX20_03499 0.20 -0.2 3,685,493 - MPMX20_03499 0.21 +0.4 3,685,521 - MPMX20_03499 0.23 -1.1 3,685,527 - MPMX20_03499 0.23 -1.1 3,685,604 + MPMX20_03499 0.29 -1.2 3,685,629 + MPMX20_03499 0.30 +0.3 3,685,629 + MPMX20_03499 0.30 +0.4 3,685,629 - MPMX20_03499 0.30 -0.0 3,685,637 - MPMX20_03499 0.31 -0.2 3,685,650 - MPMX20_03499 0.32 -0.4 3,685,664 + MPMX20_03499 0.33 -1.0 3,685,682 + MPMX20_03499 0.34 -0.0 3,685,687 + MPMX20_03499 0.35 +0.2 3,685,687 + MPMX20_03499 0.35 -0.1 3,685,687 + MPMX20_03499 0.35 -0.2 3,685,695 - MPMX20_03499 0.35 -0.5 3,685,695 - MPMX20_03499 0.35 +0.5 3,685,705 + MPMX20_03499 0.36 +1.0 3,685,705 + MPMX20_03499 0.36 -0.4 3,685,705 - MPMX20_03499 0.36 -0.9 3,685,709 - MPMX20_03499 0.36 -1.9 3,685,713 - MPMX20_03499 0.36 +1.6 3,685,713 - MPMX20_03499 0.36 +0.2 3,685,715 + MPMX20_03499 0.36 +0.6 3,685,715 + MPMX20_03499 0.36 +0.1 3,685,715 + MPMX20_03499 0.36 -0.3 3,685,718 - MPMX20_03499 0.37 +0.1 3,685,719 - MPMX20_03499 0.37 -0.6 3,685,720 + MPMX20_03499 0.37 -1.4 3,685,720 + MPMX20_03499 0.37 -2.3 3,685,720 + MPMX20_03499 0.37 +0.0 3,685,723 - MPMX20_03499 0.37 +0.3 3,685,728 - MPMX20_03499 0.37 +0.1 3,685,744 + MPMX20_03499 0.39 +0.9 3,685,752 - MPMX20_03499 0.39 -0.6 3,685,752 - MPMX20_03499 0.39 +0.4 3,685,754 + MPMX20_03499 0.39 -0.5 3,685,757 - MPMX20_03499 0.39 -0.6 3,685,762 - MPMX20_03499 0.40 +0.5 3,685,762 - MPMX20_03499 0.40 +0.1 3,685,762 - MPMX20_03499 0.40 +1.3 3,685,762 - MPMX20_03499 0.40 -0.2 3,685,762 - MPMX20_03499 0.40 -0.1 3,685,764 + MPMX20_03499 0.40 -1.0 3,685,798 - MPMX20_03499 0.42 -0.7 3,685,800 + MPMX20_03499 0.42 +0.1 3,685,816 - MPMX20_03499 0.44 +0.4 3,685,818 + MPMX20_03499 0.44 -0.2 3,685,818 + MPMX20_03499 0.44 -0.3 3,685,823 + MPMX20_03499 0.44 -0.4 3,685,823 + MPMX20_03499 0.44 -0.5 3,685,826 - MPMX20_03499 0.44 -1.5 3,685,826 - MPMX20_03499 0.44 +0.3 3,685,831 - MPMX20_03499 0.45 -0.1 3,685,831 - MPMX20_03499 0.45 +0.4 3,685,867 + MPMX20_03499 0.47 -0.9 3,685,872 - MPMX20_03499 0.47 -0.0 3,685,875 - MPMX20_03499 0.48 -0.0 3,685,912 - MPMX20_03499 0.50 +2.6 3,685,914 + MPMX20_03499 0.50 +0.2 3,685,917 + MPMX20_03499 0.51 -0.7 3,685,958 + MPMX20_03499 0.54 -1.5 3,685,958 + MPMX20_03499 0.54 +0.3 3,685,958 + MPMX20_03499 0.54 +0.5 3,685,958 + MPMX20_03499 0.54 +0.2 3,685,958 + MPMX20_03499 0.54 +0.2 3,685,966 - MPMX20_03499 0.54 -0.5 3,685,994 + MPMX20_03499 0.56 +1.6 3,686,018 + MPMX20_03499 0.58 +0.2 3,686,026 - MPMX20_03499 0.58 -0.5 3,686,026 - MPMX20_03499 0.58 +0.4 3,686,064 + MPMX20_03499 0.61 +0.1 3,686,069 + MPMX20_03499 0.61 +1.0 3,686,069 + MPMX20_03499 0.61 -0.7 3,686,072 - MPMX20_03499 0.61 +0.2 3,686,072 - MPMX20_03499 0.61 +0.2 3,686,072 - MPMX20_03499 0.61 -0.4 3,686,072 - MPMX20_03499 0.61 +0.4 3,686,174 - MPMX20_03499 0.69 -0.7 3,686,178 + MPMX20_03499 0.69 +1.4
Or see this region's nucleotide sequence