Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03268

Experiment: Tween 20 (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03266 and MPMX20_03267 are separated by 48 nucleotidesMPMX20_03267 and MPMX20_03268 are separated by 209 nucleotidesMPMX20_03268 and MPMX20_03269 overlap by 1 nucleotides MPMX20_03266: MPMX20_03266 - Endonuclease MutS2, at 3,436,510 to 3,437,061 _03266 MPMX20_03267: MPMX20_03267 - Phosphohistidine phosphatase SixA, at 3,437,110 to 3,437,595 _03267 MPMX20_03268: MPMX20_03268 - Fatty acid oxidation complex subunit alpha, at 3,437,805 to 3,439,952 _03268 MPMX20_03269: MPMX20_03269 - 3-ketoacyl-CoA thiolase FadI, at 3,439,952 to 3,441,262 _03269 Position (kb) 3437 3438 3439 3440Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3436.814 kb on + strand, within MPMX20_03266at 3436.822 kb on - strand, within MPMX20_03266at 3436.824 kb on + strand, within MPMX20_03266at 3437.000 kb on - strand, within MPMX20_03266at 3437.050 kb on + strandat 3437.080 kb on + strandat 3437.083 kb on - strandat 3437.239 kb on - strand, within MPMX20_03267at 3437.239 kb on - strand, within MPMX20_03267at 3437.281 kb on + strand, within MPMX20_03267at 3437.286 kb on + strand, within MPMX20_03267at 3437.373 kb on + strand, within MPMX20_03267at 3437.401 kb on + strand, within MPMX20_03267at 3437.436 kb on + strand, within MPMX20_03267at 3437.780 kb on + strandat 3437.794 kb on - strandat 3437.882 kb on + strandat 3437.896 kb on - strandat 3437.915 kb on - strandat 3437.931 kb on + strandat 3437.950 kb on - strandat 3437.950 kb on - strandat 3438.047 kb on + strand, within MPMX20_03268at 3438.047 kb on + strand, within MPMX20_03268at 3438.055 kb on - strand, within MPMX20_03268at 3438.055 kb on - strand, within MPMX20_03268at 3438.055 kb on - strand, within MPMX20_03268at 3438.055 kb on - strand, within MPMX20_03268at 3438.055 kb on - strand, within MPMX20_03268at 3438.075 kb on - strand, within MPMX20_03268at 3438.080 kb on + strand, within MPMX20_03268at 3438.090 kb on + strand, within MPMX20_03268at 3438.090 kb on + strand, within MPMX20_03268at 3438.090 kb on + strand, within MPMX20_03268at 3438.092 kb on + strand, within MPMX20_03268at 3438.098 kb on - strand, within MPMX20_03268at 3438.125 kb on + strand, within MPMX20_03268at 3438.261 kb on + strand, within MPMX20_03268at 3438.296 kb on + strand, within MPMX20_03268at 3438.366 kb on - strand, within MPMX20_03268at 3438.384 kb on - strand, within MPMX20_03268at 3438.497 kb on + strand, within MPMX20_03268at 3438.559 kb on + strand, within MPMX20_03268at 3438.572 kb on + strand, within MPMX20_03268at 3438.585 kb on - strand, within MPMX20_03268at 3438.698 kb on + strand, within MPMX20_03268at 3438.699 kb on + strand, within MPMX20_03268at 3438.717 kb on - strand, within MPMX20_03268at 3438.765 kb on - strand, within MPMX20_03268at 3438.799 kb on + strand, within MPMX20_03268at 3438.853 kb on + strand, within MPMX20_03268at 3438.889 kb on - strand, within MPMX20_03268at 3438.908 kb on - strand, within MPMX20_03268at 3438.914 kb on + strand, within MPMX20_03268at 3439.016 kb on + strand, within MPMX20_03268at 3439.038 kb on + strand, within MPMX20_03268at 3439.078 kb on - strand, within MPMX20_03268at 3439.110 kb on - strand, within MPMX20_03268at 3439.137 kb on + strand, within MPMX20_03268at 3439.137 kb on + strand, within MPMX20_03268at 3439.178 kb on - strand, within MPMX20_03268at 3439.178 kb on - strand, within MPMX20_03268at 3439.204 kb on - strand, within MPMX20_03268at 3439.204 kb on - strand, within MPMX20_03268at 3439.221 kb on + strand, within MPMX20_03268at 3439.266 kb on + strand, within MPMX20_03268at 3439.266 kb on + strand, within MPMX20_03268at 3439.266 kb on + strand, within MPMX20_03268at 3439.266 kb on + strand, within MPMX20_03268at 3439.266 kb on + strand, within MPMX20_03268at 3439.274 kb on - strand, within MPMX20_03268at 3439.274 kb on - strand, within MPMX20_03268at 3439.274 kb on - strand, within MPMX20_03268at 3439.274 kb on - strand, within MPMX20_03268at 3439.274 kb on - strand, within MPMX20_03268at 3439.288 kb on + strand, within MPMX20_03268at 3439.292 kb on + strand, within MPMX20_03268at 3439.465 kb on + strand, within MPMX20_03268at 3439.465 kb on + strand, within MPMX20_03268at 3439.465 kb on + strand, within MPMX20_03268at 3439.473 kb on - strand, within MPMX20_03268at 3439.473 kb on - strand, within MPMX20_03268at 3439.531 kb on + strand, within MPMX20_03268at 3439.537 kb on + strand, within MPMX20_03268at 3439.540 kb on - strand, within MPMX20_03268at 3439.542 kb on + strand, within MPMX20_03268at 3439.560 kb on - strand, within MPMX20_03268at 3439.624 kb on + strand, within MPMX20_03268at 3439.698 kb on - strand, within MPMX20_03268at 3439.709 kb on + strand, within MPMX20_03268at 3439.838 kb on + strandat 3439.987 kb on - strandat 3440.075 kb on - strandat 3440.090 kb on + strand, within MPMX20_03269at 3440.091 kb on - strand, within MPMX20_03269at 3440.167 kb on - strand, within MPMX20_03269at 3440.197 kb on + strand, within MPMX20_03269at 3440.242 kb on - strand, within MPMX20_03269at 3440.249 kb on + strand, within MPMX20_03269at 3440.264 kb on + strand, within MPMX20_03269at 3440.264 kb on + strand, within MPMX20_03269at 3440.264 kb on + strand, within MPMX20_03269at 3440.349 kb on + strand, within MPMX20_03269at 3440.374 kb on + strand, within MPMX20_03269at 3440.570 kb on + strand, within MPMX20_03269at 3440.722 kb on - strand, within MPMX20_03269at 3440.724 kb on + strand, within MPMX20_03269at 3440.732 kb on - strand, within MPMX20_03269at 3440.755 kb on + strand, within MPMX20_03269at 3440.770 kb on + strand, within MPMX20_03269at 3440.778 kb on - strand, within MPMX20_03269at 3440.778 kb on - strand, within MPMX20_03269at 3440.808 kb on - strand, within MPMX20_03269at 3440.869 kb on + strand, within MPMX20_03269at 3440.872 kb on + strand, within MPMX20_03269

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C)
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3,436,814 + MPMX20_03266 0.55 +0.4
3,436,822 - MPMX20_03266 0.57 +0.5
3,436,824 + MPMX20_03266 0.57 -1.7
3,437,000 - MPMX20_03266 0.89 +0.2
3,437,050 + +0.8
3,437,080 + +0.2
3,437,083 - -0.8
3,437,239 - MPMX20_03267 0.27 -4.3
3,437,239 - MPMX20_03267 0.27 -3.2
3,437,281 + MPMX20_03267 0.35 -1.7
3,437,286 + MPMX20_03267 0.36 -3.8
3,437,373 + MPMX20_03267 0.54 -1.1
3,437,401 + MPMX20_03267 0.60 -2.7
3,437,436 + MPMX20_03267 0.67 -1.6
3,437,780 + +0.3
3,437,794 - -0.9
3,437,882 + -2.2
3,437,896 - -1.4
3,437,915 - -0.9
3,437,931 + -0.3
3,437,950 - -1.7
3,437,950 - -0.7
3,438,047 + MPMX20_03268 0.11 -1.2
3,438,047 + MPMX20_03268 0.11 -1.6
3,438,055 - MPMX20_03268 0.12 -0.1
3,438,055 - MPMX20_03268 0.12 -1.1
3,438,055 - MPMX20_03268 0.12 +1.0
3,438,055 - MPMX20_03268 0.12 -2.7
3,438,055 - MPMX20_03268 0.12 -1.7
3,438,075 - MPMX20_03268 0.13 -0.8
3,438,080 + MPMX20_03268 0.13 +0.1
3,438,090 + MPMX20_03268 0.13 -2.2
3,438,090 + MPMX20_03268 0.13 -2.0
3,438,090 + MPMX20_03268 0.13 +0.6
3,438,092 + MPMX20_03268 0.13 -2.3
3,438,098 - MPMX20_03268 0.14 -1.3
3,438,125 + MPMX20_03268 0.15 -3.6
3,438,261 + MPMX20_03268 0.21 -1.8
3,438,296 + MPMX20_03268 0.23 -1.0
3,438,366 - MPMX20_03268 0.26 -0.0
3,438,384 - MPMX20_03268 0.27 -0.6
3,438,497 + MPMX20_03268 0.32 -0.2
3,438,559 + MPMX20_03268 0.35 -2.2
3,438,572 + MPMX20_03268 0.36 -0.2
3,438,585 - MPMX20_03268 0.36 -3.3
3,438,698 + MPMX20_03268 0.42 -2.3
3,438,699 + MPMX20_03268 0.42 -1.4
3,438,717 - MPMX20_03268 0.42 -0.7
3,438,765 - MPMX20_03268 0.45 -1.7
3,438,799 + MPMX20_03268 0.46 -3.1
3,438,853 + MPMX20_03268 0.49 -0.7
3,438,889 - MPMX20_03268 0.50 -1.7
3,438,908 - MPMX20_03268 0.51 -1.7
3,438,914 + MPMX20_03268 0.52 -0.2
3,439,016 + MPMX20_03268 0.56 -1.6
3,439,038 + MPMX20_03268 0.57 -0.2
3,439,078 - MPMX20_03268 0.59 -2.5
3,439,110 - MPMX20_03268 0.61 -0.9
3,439,137 + MPMX20_03268 0.62 +1.7
3,439,137 + MPMX20_03268 0.62 -3.0
3,439,178 - MPMX20_03268 0.64 -2.6
3,439,178 - MPMX20_03268 0.64 -0.6
3,439,204 - MPMX20_03268 0.65 -1.7
3,439,204 - MPMX20_03268 0.65 -0.2
3,439,221 + MPMX20_03268 0.66 -0.9
3,439,266 + MPMX20_03268 0.68 -0.9
3,439,266 + MPMX20_03268 0.68 -0.8
3,439,266 + MPMX20_03268 0.68 -1.3
3,439,266 + MPMX20_03268 0.68 -1.6
3,439,266 + MPMX20_03268 0.68 -0.0
3,439,274 - MPMX20_03268 0.68 -1.0
3,439,274 - MPMX20_03268 0.68 -0.7
3,439,274 - MPMX20_03268 0.68 -3.0
3,439,274 - MPMX20_03268 0.68 -1.2
3,439,274 - MPMX20_03268 0.68 -1.2
3,439,288 + MPMX20_03268 0.69 -0.7
3,439,292 + MPMX20_03268 0.69 -0.2
3,439,465 + MPMX20_03268 0.77 -0.6
3,439,465 + MPMX20_03268 0.77 -1.4
3,439,465 + MPMX20_03268 0.77 -1.6
3,439,473 - MPMX20_03268 0.78 -1.5
3,439,473 - MPMX20_03268 0.78 -0.3
3,439,531 + MPMX20_03268 0.80 -0.2
3,439,537 + MPMX20_03268 0.81 -1.2
3,439,540 - MPMX20_03268 0.81 +0.2
3,439,542 + MPMX20_03268 0.81 -0.9
3,439,560 - MPMX20_03268 0.82 -0.7
3,439,624 + MPMX20_03268 0.85 -0.2
3,439,698 - MPMX20_03268 0.88 -2.0
3,439,709 + MPMX20_03268 0.89 -0.9
3,439,838 + -0.6
3,439,987 - -0.7
3,440,075 - -2.0
3,440,090 + MPMX20_03269 0.11 -0.4
3,440,091 - MPMX20_03269 0.11 +0.6
3,440,167 - MPMX20_03269 0.16 -1.5
3,440,197 + MPMX20_03269 0.19 -3.5
3,440,242 - MPMX20_03269 0.22 -1.4
3,440,249 + MPMX20_03269 0.23 -1.2
3,440,264 + MPMX20_03269 0.24 +0.1
3,440,264 + MPMX20_03269 0.24 -0.4
3,440,264 + MPMX20_03269 0.24 -1.7
3,440,349 + MPMX20_03269 0.30 -2.8
3,440,374 + MPMX20_03269 0.32 +0.4
3,440,570 + MPMX20_03269 0.47 -2.2
3,440,722 - MPMX20_03269 0.59 -0.5
3,440,724 + MPMX20_03269 0.59 -1.7
3,440,732 - MPMX20_03269 0.59 -0.2
3,440,755 + MPMX20_03269 0.61 -0.7
3,440,770 + MPMX20_03269 0.62 -1.2
3,440,778 - MPMX20_03269 0.63 +1.1
3,440,778 - MPMX20_03269 0.63 +0.4
3,440,808 - MPMX20_03269 0.65 -2.4
3,440,869 + MPMX20_03269 0.70 -0.1
3,440,872 + MPMX20_03269 0.70 -0.9

Or see this region's nucleotide sequence