Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03266 and MPMX20_03267 are separated by 48 nucleotides MPMX20_03267 and MPMX20_03268 are separated by 209 nucleotides MPMX20_03268 and MPMX20_03269 overlap by 1 nucleotides
MPMX20_03266: MPMX20_03266 - Endonuclease MutS2, at 3,436,510 to 3,437,061
_03266
MPMX20_03267: MPMX20_03267 - Phosphohistidine phosphatase SixA, at 3,437,110 to 3,437,595
_03267
MPMX20_03268: MPMX20_03268 - Fatty acid oxidation complex subunit alpha, at 3,437,805 to 3,439,952
_03268
MPMX20_03269: MPMX20_03269 - 3-ketoacyl-CoA thiolase FadI, at 3,439,952 to 3,441,262
_03269
Position (kb)
3437
3438
3439
3440 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3436.814 kb on + strand, within MPMX20_03266 at 3436.822 kb on - strand, within MPMX20_03266 at 3436.824 kb on + strand, within MPMX20_03266 at 3437.000 kb on - strand, within MPMX20_03266 at 3437.050 kb on + strand at 3437.080 kb on + strand at 3437.083 kb on - strand at 3437.239 kb on - strand, within MPMX20_03267 at 3437.239 kb on - strand, within MPMX20_03267 at 3437.281 kb on + strand, within MPMX20_03267 at 3437.286 kb on + strand, within MPMX20_03267 at 3437.373 kb on + strand, within MPMX20_03267 at 3437.401 kb on + strand, within MPMX20_03267 at 3437.436 kb on + strand, within MPMX20_03267 at 3437.780 kb on + strand at 3437.794 kb on - strand at 3437.882 kb on + strand at 3437.896 kb on - strand at 3437.915 kb on - strand at 3437.931 kb on + strand at 3437.950 kb on - strand at 3437.950 kb on - strand at 3438.047 kb on + strand, within MPMX20_03268 at 3438.047 kb on + strand, within MPMX20_03268 at 3438.055 kb on - strand, within MPMX20_03268 at 3438.055 kb on - strand, within MPMX20_03268 at 3438.055 kb on - strand, within MPMX20_03268 at 3438.055 kb on - strand, within MPMX20_03268 at 3438.055 kb on - strand, within MPMX20_03268 at 3438.075 kb on - strand, within MPMX20_03268 at 3438.080 kb on + strand, within MPMX20_03268 at 3438.090 kb on + strand, within MPMX20_03268 at 3438.090 kb on + strand, within MPMX20_03268 at 3438.090 kb on + strand, within MPMX20_03268 at 3438.092 kb on + strand, within MPMX20_03268 at 3438.098 kb on - strand, within MPMX20_03268 at 3438.125 kb on + strand, within MPMX20_03268 at 3438.261 kb on + strand, within MPMX20_03268 at 3438.296 kb on + strand, within MPMX20_03268 at 3438.366 kb on - strand, within MPMX20_03268 at 3438.384 kb on - strand, within MPMX20_03268 at 3438.497 kb on + strand, within MPMX20_03268 at 3438.559 kb on + strand, within MPMX20_03268 at 3438.572 kb on + strand, within MPMX20_03268 at 3438.585 kb on - strand, within MPMX20_03268 at 3438.698 kb on + strand, within MPMX20_03268 at 3438.699 kb on + strand, within MPMX20_03268 at 3438.717 kb on - strand, within MPMX20_03268 at 3438.765 kb on - strand, within MPMX20_03268 at 3438.799 kb on + strand, within MPMX20_03268 at 3438.853 kb on + strand, within MPMX20_03268 at 3438.889 kb on - strand, within MPMX20_03268 at 3438.908 kb on - strand, within MPMX20_03268 at 3438.914 kb on + strand, within MPMX20_03268 at 3439.016 kb on + strand, within MPMX20_03268 at 3439.038 kb on + strand, within MPMX20_03268 at 3439.078 kb on - strand, within MPMX20_03268 at 3439.110 kb on - strand, within MPMX20_03268 at 3439.137 kb on + strand, within MPMX20_03268 at 3439.137 kb on + strand, within MPMX20_03268 at 3439.178 kb on - strand, within MPMX20_03268 at 3439.178 kb on - strand, within MPMX20_03268 at 3439.204 kb on - strand, within MPMX20_03268 at 3439.204 kb on - strand, within MPMX20_03268 at 3439.221 kb on + strand, within MPMX20_03268 at 3439.266 kb on + strand, within MPMX20_03268 at 3439.266 kb on + strand, within MPMX20_03268 at 3439.266 kb on + strand, within MPMX20_03268 at 3439.266 kb on + strand, within MPMX20_03268 at 3439.266 kb on + strand, within MPMX20_03268 at 3439.274 kb on - strand, within MPMX20_03268 at 3439.274 kb on - strand, within MPMX20_03268 at 3439.274 kb on - strand, within MPMX20_03268 at 3439.274 kb on - strand, within MPMX20_03268 at 3439.274 kb on - strand, within MPMX20_03268 at 3439.288 kb on + strand, within MPMX20_03268 at 3439.292 kb on + strand, within MPMX20_03268 at 3439.465 kb on + strand, within MPMX20_03268 at 3439.465 kb on + strand, within MPMX20_03268 at 3439.465 kb on + strand, within MPMX20_03268 at 3439.473 kb on - strand, within MPMX20_03268 at 3439.473 kb on - strand, within MPMX20_03268 at 3439.531 kb on + strand, within MPMX20_03268 at 3439.537 kb on + strand, within MPMX20_03268 at 3439.540 kb on - strand, within MPMX20_03268 at 3439.542 kb on + strand, within MPMX20_03268 at 3439.560 kb on - strand, within MPMX20_03268 at 3439.624 kb on + strand, within MPMX20_03268 at 3439.698 kb on - strand, within MPMX20_03268 at 3439.709 kb on + strand, within MPMX20_03268 at 3439.838 kb on + strand at 3439.987 kb on - strand at 3440.075 kb on - strand at 3440.090 kb on + strand, within MPMX20_03269 at 3440.091 kb on - strand, within MPMX20_03269 at 3440.167 kb on - strand, within MPMX20_03269 at 3440.197 kb on + strand, within MPMX20_03269 at 3440.242 kb on - strand, within MPMX20_03269 at 3440.249 kb on + strand, within MPMX20_03269 at 3440.264 kb on + strand, within MPMX20_03269 at 3440.264 kb on + strand, within MPMX20_03269 at 3440.264 kb on + strand, within MPMX20_03269 at 3440.349 kb on + strand, within MPMX20_03269 at 3440.374 kb on + strand, within MPMX20_03269 at 3440.570 kb on + strand, within MPMX20_03269 at 3440.722 kb on - strand, within MPMX20_03269 at 3440.724 kb on + strand, within MPMX20_03269 at 3440.732 kb on - strand, within MPMX20_03269 at 3440.755 kb on + strand, within MPMX20_03269 at 3440.770 kb on + strand, within MPMX20_03269 at 3440.778 kb on - strand, within MPMX20_03269 at 3440.778 kb on - strand, within MPMX20_03269 at 3440.808 kb on - strand, within MPMX20_03269 at 3440.869 kb on + strand, within MPMX20_03269 at 3440.872 kb on + strand, within MPMX20_03269
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 3,436,814 + MPMX20_03266 0.55 +0.4 3,436,822 - MPMX20_03266 0.57 +0.5 3,436,824 + MPMX20_03266 0.57 -1.7 3,437,000 - MPMX20_03266 0.89 +0.2 3,437,050 + +0.8 3,437,080 + +0.2 3,437,083 - -0.8 3,437,239 - MPMX20_03267 0.27 -4.3 3,437,239 - MPMX20_03267 0.27 -3.2 3,437,281 + MPMX20_03267 0.35 -1.7 3,437,286 + MPMX20_03267 0.36 -3.8 3,437,373 + MPMX20_03267 0.54 -1.1 3,437,401 + MPMX20_03267 0.60 -2.7 3,437,436 + MPMX20_03267 0.67 -1.6 3,437,780 + +0.3 3,437,794 - -0.9 3,437,882 + -2.2 3,437,896 - -1.4 3,437,915 - -0.9 3,437,931 + -0.3 3,437,950 - -1.7 3,437,950 - -0.7 3,438,047 + MPMX20_03268 0.11 -1.2 3,438,047 + MPMX20_03268 0.11 -1.6 3,438,055 - MPMX20_03268 0.12 -0.1 3,438,055 - MPMX20_03268 0.12 -1.1 3,438,055 - MPMX20_03268 0.12 +1.0 3,438,055 - MPMX20_03268 0.12 -2.7 3,438,055 - MPMX20_03268 0.12 -1.7 3,438,075 - MPMX20_03268 0.13 -0.8 3,438,080 + MPMX20_03268 0.13 +0.1 3,438,090 + MPMX20_03268 0.13 -2.2 3,438,090 + MPMX20_03268 0.13 -2.0 3,438,090 + MPMX20_03268 0.13 +0.6 3,438,092 + MPMX20_03268 0.13 -2.3 3,438,098 - MPMX20_03268 0.14 -1.3 3,438,125 + MPMX20_03268 0.15 -3.6 3,438,261 + MPMX20_03268 0.21 -1.8 3,438,296 + MPMX20_03268 0.23 -1.0 3,438,366 - MPMX20_03268 0.26 -0.0 3,438,384 - MPMX20_03268 0.27 -0.6 3,438,497 + MPMX20_03268 0.32 -0.2 3,438,559 + MPMX20_03268 0.35 -2.2 3,438,572 + MPMX20_03268 0.36 -0.2 3,438,585 - MPMX20_03268 0.36 -3.3 3,438,698 + MPMX20_03268 0.42 -2.3 3,438,699 + MPMX20_03268 0.42 -1.4 3,438,717 - MPMX20_03268 0.42 -0.7 3,438,765 - MPMX20_03268 0.45 -1.7 3,438,799 + MPMX20_03268 0.46 -3.1 3,438,853 + MPMX20_03268 0.49 -0.7 3,438,889 - MPMX20_03268 0.50 -1.7 3,438,908 - MPMX20_03268 0.51 -1.7 3,438,914 + MPMX20_03268 0.52 -0.2 3,439,016 + MPMX20_03268 0.56 -1.6 3,439,038 + MPMX20_03268 0.57 -0.2 3,439,078 - MPMX20_03268 0.59 -2.5 3,439,110 - MPMX20_03268 0.61 -0.9 3,439,137 + MPMX20_03268 0.62 +1.7 3,439,137 + MPMX20_03268 0.62 -3.0 3,439,178 - MPMX20_03268 0.64 -2.6 3,439,178 - MPMX20_03268 0.64 -0.6 3,439,204 - MPMX20_03268 0.65 -1.7 3,439,204 - MPMX20_03268 0.65 -0.2 3,439,221 + MPMX20_03268 0.66 -0.9 3,439,266 + MPMX20_03268 0.68 -0.9 3,439,266 + MPMX20_03268 0.68 -0.8 3,439,266 + MPMX20_03268 0.68 -1.3 3,439,266 + MPMX20_03268 0.68 -1.6 3,439,266 + MPMX20_03268 0.68 -0.0 3,439,274 - MPMX20_03268 0.68 -1.0 3,439,274 - MPMX20_03268 0.68 -0.7 3,439,274 - MPMX20_03268 0.68 -3.0 3,439,274 - MPMX20_03268 0.68 -1.2 3,439,274 - MPMX20_03268 0.68 -1.2 3,439,288 + MPMX20_03268 0.69 -0.7 3,439,292 + MPMX20_03268 0.69 -0.2 3,439,465 + MPMX20_03268 0.77 -0.6 3,439,465 + MPMX20_03268 0.77 -1.4 3,439,465 + MPMX20_03268 0.77 -1.6 3,439,473 - MPMX20_03268 0.78 -1.5 3,439,473 - MPMX20_03268 0.78 -0.3 3,439,531 + MPMX20_03268 0.80 -0.2 3,439,537 + MPMX20_03268 0.81 -1.2 3,439,540 - MPMX20_03268 0.81 +0.2 3,439,542 + MPMX20_03268 0.81 -0.9 3,439,560 - MPMX20_03268 0.82 -0.7 3,439,624 + MPMX20_03268 0.85 -0.2 3,439,698 - MPMX20_03268 0.88 -2.0 3,439,709 + MPMX20_03268 0.89 -0.9 3,439,838 + -0.6 3,439,987 - -0.7 3,440,075 - -2.0 3,440,090 + MPMX20_03269 0.11 -0.4 3,440,091 - MPMX20_03269 0.11 +0.6 3,440,167 - MPMX20_03269 0.16 -1.5 3,440,197 + MPMX20_03269 0.19 -3.5 3,440,242 - MPMX20_03269 0.22 -1.4 3,440,249 + MPMX20_03269 0.23 -1.2 3,440,264 + MPMX20_03269 0.24 +0.1 3,440,264 + MPMX20_03269 0.24 -0.4 3,440,264 + MPMX20_03269 0.24 -1.7 3,440,349 + MPMX20_03269 0.30 -2.8 3,440,374 + MPMX20_03269 0.32 +0.4 3,440,570 + MPMX20_03269 0.47 -2.2 3,440,722 - MPMX20_03269 0.59 -0.5 3,440,724 + MPMX20_03269 0.59 -1.7 3,440,732 - MPMX20_03269 0.59 -0.2 3,440,755 + MPMX20_03269 0.61 -0.7 3,440,770 + MPMX20_03269 0.62 -1.2 3,440,778 - MPMX20_03269 0.63 +1.1 3,440,778 - MPMX20_03269 0.63 +0.4 3,440,808 - MPMX20_03269 0.65 -2.4 3,440,869 + MPMX20_03269 0.70 -0.1 3,440,872 + MPMX20_03269 0.70 -0.9
Or see this region's nucleotide sequence