Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02269

Experiment: Tween 20 (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02267 and MPMX20_02268 overlap by 47 nucleotidesMPMX20_02268 and MPMX20_02269 are separated by 99 nucleotidesMPMX20_02269 and MPMX20_02270 overlap by 19 nucleotides MPMX20_02267: MPMX20_02267 - hypothetical protein, at 2,377,938 to 2,378,420 _02267 MPMX20_02268: MPMX20_02268 - HTH-type transcriptional regulator GltR, at 2,378,374 to 2,379,252 _02268 MPMX20_02269: MPMX20_02269 - Succinate semialdehyde dehydrogenase [NAD(P)+] Sad, at 2,379,352 to 2,380,740 _02269 MPMX20_02270: MPMX20_02270 - Methyl-accepting chemotaxis protein I, at 2,380,722 to 2,382,446 _02270 Position (kb) 2379 2380 2381Strain fitness (log2 ratio) -2 -1 0 1 2at 2378.372 kb on + strandat 2378.390 kb on + strandat 2378.437 kb on + strandat 2378.437 kb on + strandat 2378.437 kb on + strandat 2378.445 kb on - strandat 2378.445 kb on - strandat 2378.477 kb on - strand, within MPMX20_02268at 2378.598 kb on + strand, within MPMX20_02268at 2378.741 kb on - strand, within MPMX20_02268at 2378.885 kb on - strand, within MPMX20_02268at 2378.903 kb on + strand, within MPMX20_02268at 2378.962 kb on - strand, within MPMX20_02268at 2378.970 kb on - strand, within MPMX20_02268at 2379.029 kb on + strand, within MPMX20_02268at 2379.062 kb on + strand, within MPMX20_02268at 2379.087 kb on - strand, within MPMX20_02268at 2379.104 kb on + strand, within MPMX20_02268at 2379.131 kb on + strand, within MPMX20_02268at 2379.141 kb on + strand, within MPMX20_02268at 2379.162 kb on - strand, within MPMX20_02268at 2379.180 kb on + strandat 2379.221 kb on - strandat 2379.229 kb on - strandat 2379.332 kb on - strandat 2379.381 kb on - strandat 2379.383 kb on + strandat 2379.383 kb on + strandat 2379.391 kb on - strandat 2379.391 kb on - strandat 2379.391 kb on - strandat 2379.391 kb on - strandat 2379.392 kb on - strandat 2379.423 kb on - strandat 2379.426 kb on + strandat 2379.426 kb on + strandat 2379.440 kb on + strandat 2379.450 kb on - strandat 2379.481 kb on - strandat 2379.491 kb on - strand, within MPMX20_02269at 2379.491 kb on - strand, within MPMX20_02269at 2379.619 kb on - strand, within MPMX20_02269at 2379.655 kb on - strand, within MPMX20_02269at 2379.685 kb on - strand, within MPMX20_02269at 2379.734 kb on + strand, within MPMX20_02269at 2379.773 kb on + strand, within MPMX20_02269at 2379.781 kb on - strand, within MPMX20_02269at 2379.781 kb on - strand, within MPMX20_02269at 2379.816 kb on - strand, within MPMX20_02269at 2379.825 kb on + strand, within MPMX20_02269at 2379.832 kb on - strand, within MPMX20_02269at 2379.833 kb on - strand, within MPMX20_02269at 2379.833 kb on - strand, within MPMX20_02269at 2379.833 kb on - strand, within MPMX20_02269at 2379.841 kb on + strand, within MPMX20_02269at 2379.854 kb on + strand, within MPMX20_02269at 2379.873 kb on + strand, within MPMX20_02269at 2379.904 kb on + strand, within MPMX20_02269at 2379.912 kb on - strand, within MPMX20_02269at 2380.020 kb on + strand, within MPMX20_02269at 2380.061 kb on + strand, within MPMX20_02269at 2380.061 kb on + strand, within MPMX20_02269at 2380.061 kb on + strand, within MPMX20_02269at 2380.061 kb on + strand, within MPMX20_02269at 2380.069 kb on - strand, within MPMX20_02269at 2380.069 kb on - strand, within MPMX20_02269at 2380.101 kb on - strand, within MPMX20_02269at 2380.130 kb on - strand, within MPMX20_02269at 2380.149 kb on + strand, within MPMX20_02269at 2380.149 kb on + strand, within MPMX20_02269at 2380.157 kb on - strand, within MPMX20_02269at 2380.157 kb on - strand, within MPMX20_02269at 2380.185 kb on + strand, within MPMX20_02269at 2380.209 kb on + strand, within MPMX20_02269at 2380.236 kb on + strand, within MPMX20_02269at 2380.286 kb on + strand, within MPMX20_02269at 2380.286 kb on + strand, within MPMX20_02269at 2380.361 kb on - strand, within MPMX20_02269at 2380.381 kb on + strand, within MPMX20_02269at 2380.388 kb on + strand, within MPMX20_02269at 2380.388 kb on + strand, within MPMX20_02269at 2380.389 kb on - strand, within MPMX20_02269at 2380.396 kb on - strand, within MPMX20_02269at 2380.396 kb on - strand, within MPMX20_02269at 2380.396 kb on - strand, within MPMX20_02269at 2380.396 kb on - strand, within MPMX20_02269at 2380.396 kb on - strand, within MPMX20_02269at 2380.410 kb on + strand, within MPMX20_02269at 2380.457 kb on - strand, within MPMX20_02269at 2380.528 kb on - strand, within MPMX20_02269at 2380.608 kb on - strandat 2380.639 kb on + strandat 2380.709 kb on - strandat 2380.760 kb on - strandat 2380.892 kb on + strandat 2380.894 kb on + strandat 2380.895 kb on + strand, within MPMX20_02270at 2380.902 kb on - strand, within MPMX20_02270at 2380.917 kb on - strand, within MPMX20_02270at 2380.917 kb on - strand, within MPMX20_02270at 2380.959 kb on - strand, within MPMX20_02270at 2380.961 kb on + strand, within MPMX20_02270at 2380.967 kb on - strand, within MPMX20_02270at 2380.994 kb on + strand, within MPMX20_02270at 2381.017 kb on - strand, within MPMX20_02270at 2381.056 kb on - strand, within MPMX20_02270at 2381.058 kb on + strand, within MPMX20_02270at 2381.148 kb on - strand, within MPMX20_02270at 2381.183 kb on - strand, within MPMX20_02270at 2381.204 kb on + strand, within MPMX20_02270at 2381.204 kb on + strand, within MPMX20_02270at 2381.204 kb on + strand, within MPMX20_02270at 2381.212 kb on - strand, within MPMX20_02270at 2381.306 kb on + strand, within MPMX20_02270at 2381.520 kb on - strand, within MPMX20_02270at 2381.599 kb on - strand, within MPMX20_02270at 2381.609 kb on - strand, within MPMX20_02270at 2381.646 kb on - strand, within MPMX20_02270at 2381.660 kb on - strand, within MPMX20_02270at 2381.688 kb on + strand, within MPMX20_02270

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C)
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2,378,372 + +0.4
2,378,390 + +1.0
2,378,437 + +0.2
2,378,437 + +0.1
2,378,437 + +0.6
2,378,445 - +0.6
2,378,445 - +0.7
2,378,477 - MPMX20_02268 0.12 +0.5
2,378,598 + MPMX20_02268 0.25 -1.3
2,378,741 - MPMX20_02268 0.42 +0.2
2,378,885 - MPMX20_02268 0.58 -0.8
2,378,903 + MPMX20_02268 0.60 +1.0
2,378,962 - MPMX20_02268 0.67 +0.8
2,378,970 - MPMX20_02268 0.68 -0.5
2,379,029 + MPMX20_02268 0.75 +0.0
2,379,062 + MPMX20_02268 0.78 -1.4
2,379,087 - MPMX20_02268 0.81 +0.2
2,379,104 + MPMX20_02268 0.83 +1.9
2,379,131 + MPMX20_02268 0.86 +1.2
2,379,141 + MPMX20_02268 0.87 -0.7
2,379,162 - MPMX20_02268 0.90 -0.4
2,379,180 + +0.1
2,379,221 - -1.1
2,379,229 - -0.6
2,379,332 - -0.8
2,379,381 - +0.6
2,379,383 + -0.2
2,379,383 + -0.2
2,379,391 - -1.3
2,379,391 - -0.6
2,379,391 - -2.1
2,379,391 - +0.8
2,379,392 - -0.1
2,379,423 - +1.0
2,379,426 + -0.1
2,379,426 + +0.6
2,379,440 + +0.7
2,379,450 - +0.3
2,379,481 - -0.3
2,379,491 - MPMX20_02269 0.10 +0.2
2,379,491 - MPMX20_02269 0.10 +1.4
2,379,619 - MPMX20_02269 0.19 -0.0
2,379,655 - MPMX20_02269 0.22 +0.4
2,379,685 - MPMX20_02269 0.24 +0.8
2,379,734 + MPMX20_02269 0.28 -0.3
2,379,773 + MPMX20_02269 0.30 +0.2
2,379,781 - MPMX20_02269 0.31 +0.8
2,379,781 - MPMX20_02269 0.31 -2.1
2,379,816 - MPMX20_02269 0.33 +0.5
2,379,825 + MPMX20_02269 0.34 +1.0
2,379,832 - MPMX20_02269 0.35 -0.5
2,379,833 - MPMX20_02269 0.35 -0.4
2,379,833 - MPMX20_02269 0.35 -1.3
2,379,833 - MPMX20_02269 0.35 +1.0
2,379,841 + MPMX20_02269 0.35 +1.0
2,379,854 + MPMX20_02269 0.36 +0.3
2,379,873 + MPMX20_02269 0.38 -0.7
2,379,904 + MPMX20_02269 0.40 +1.6
2,379,912 - MPMX20_02269 0.40 +1.2
2,380,020 + MPMX20_02269 0.48 -0.6
2,380,061 + MPMX20_02269 0.51 +0.5
2,380,061 + MPMX20_02269 0.51 +1.2
2,380,061 + MPMX20_02269 0.51 -0.6
2,380,061 + MPMX20_02269 0.51 -2.3
2,380,069 - MPMX20_02269 0.52 -0.2
2,380,069 - MPMX20_02269 0.52 -1.3
2,380,101 - MPMX20_02269 0.54 +0.5
2,380,130 - MPMX20_02269 0.56 +1.0
2,380,149 + MPMX20_02269 0.57 +0.1
2,380,149 + MPMX20_02269 0.57 +0.0
2,380,157 - MPMX20_02269 0.58 +0.0
2,380,157 - MPMX20_02269 0.58 +0.1
2,380,185 + MPMX20_02269 0.60 +1.3
2,380,209 + MPMX20_02269 0.62 +0.6
2,380,236 + MPMX20_02269 0.64 -0.3
2,380,286 + MPMX20_02269 0.67 +2.0
2,380,286 + MPMX20_02269 0.67 +0.2
2,380,361 - MPMX20_02269 0.73 +0.3
2,380,381 + MPMX20_02269 0.74 +0.0
2,380,388 + MPMX20_02269 0.75 -0.2
2,380,388 + MPMX20_02269 0.75 +0.5
2,380,389 - MPMX20_02269 0.75 -0.2
2,380,396 - MPMX20_02269 0.75 +0.2
2,380,396 - MPMX20_02269 0.75 -1.3
2,380,396 - MPMX20_02269 0.75 -0.3
2,380,396 - MPMX20_02269 0.75 +0.8
2,380,396 - MPMX20_02269 0.75 +0.3
2,380,410 + MPMX20_02269 0.76 +0.1
2,380,457 - MPMX20_02269 0.80 +0.1
2,380,528 - MPMX20_02269 0.85 +0.0
2,380,608 - +0.0
2,380,639 + +0.0
2,380,709 - +0.0
2,380,760 - -0.2
2,380,892 + -1.0
2,380,894 + +0.4
2,380,895 + MPMX20_02270 0.10 -0.0
2,380,902 - MPMX20_02270 0.10 -0.8
2,380,917 - MPMX20_02270 0.11 -2.4
2,380,917 - MPMX20_02270 0.11 +1.7
2,380,959 - MPMX20_02270 0.14 -0.3
2,380,961 + MPMX20_02270 0.14 -1.1
2,380,967 - MPMX20_02270 0.14 +0.1
2,380,994 + MPMX20_02270 0.16 +0.4
2,381,017 - MPMX20_02270 0.17 -0.6
2,381,056 - MPMX20_02270 0.19 +0.5
2,381,058 + MPMX20_02270 0.19 +0.7
2,381,148 - MPMX20_02270 0.25 +0.2
2,381,183 - MPMX20_02270 0.27 +0.7
2,381,204 + MPMX20_02270 0.28 -0.0
2,381,204 + MPMX20_02270 0.28 -0.6
2,381,204 + MPMX20_02270 0.28 -1.5
2,381,212 - MPMX20_02270 0.28 -0.5
2,381,306 + MPMX20_02270 0.34 -0.3
2,381,520 - MPMX20_02270 0.46 +0.2
2,381,599 - MPMX20_02270 0.51 +1.6
2,381,609 - MPMX20_02270 0.51 -1.2
2,381,646 - MPMX20_02270 0.54 -1.6
2,381,660 - MPMX20_02270 0.54 -0.2
2,381,688 + MPMX20_02270 0.56 -1.4

Or see this region's nucleotide sequence