Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01910

Experiment: Tween 20 (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01909 and MPMX20_01910 are separated by 56 nucleotidesMPMX20_01910 and MPMX20_01911 are separated by 9 nucleotidesMPMX20_01911 and MPMX20_01912 are separated by 2 nucleotides MPMX20_01909: MPMX20_01909 - hypothetical protein, at 2,000,015 to 2,001,406 _01909 MPMX20_01910: MPMX20_01910 - Acetyl-CoA acetyltransferase, at 2,001,463 to 2,002,644 _01910 MPMX20_01911: MPMX20_01911 - putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B, at 2,002,654 to 2,003,310 _01911 MPMX20_01912: MPMX20_01912 - putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A, at 2,003,313 to 2,004,020 _01912 Position (kb) 2001 2002 2003Strain fitness (log2 ratio) -2 -1 0 1at 2000.488 kb on + strand, within MPMX20_01909at 2000.559 kb on + strand, within MPMX20_01909at 2000.601 kb on - strand, within MPMX20_01909at 2000.617 kb on + strand, within MPMX20_01909at 2000.625 kb on - strand, within MPMX20_01909at 2000.725 kb on + strand, within MPMX20_01909at 2000.725 kb on + strand, within MPMX20_01909at 2000.733 kb on - strand, within MPMX20_01909at 2000.733 kb on - strand, within MPMX20_01909at 2000.733 kb on - strand, within MPMX20_01909at 2000.733 kb on - strand, within MPMX20_01909at 2000.733 kb on - strand, within MPMX20_01909at 2000.733 kb on - strand, within MPMX20_01909at 2000.733 kb on - strand, within MPMX20_01909at 2000.733 kb on - strand, within MPMX20_01909at 2000.777 kb on - strand, within MPMX20_01909at 2000.814 kb on + strand, within MPMX20_01909at 2000.814 kb on + strand, within MPMX20_01909at 2000.814 kb on + strand, within MPMX20_01909at 2000.822 kb on - strand, within MPMX20_01909at 2000.824 kb on + strand, within MPMX20_01909at 2000.832 kb on - strand, within MPMX20_01909at 2000.832 kb on - strand, within MPMX20_01909at 2000.832 kb on - strand, within MPMX20_01909at 2000.832 kb on - strand, within MPMX20_01909at 2000.852 kb on + strand, within MPMX20_01909at 2000.865 kb on - strand, within MPMX20_01909at 2000.865 kb on - strand, within MPMX20_01909at 2000.874 kb on + strand, within MPMX20_01909at 2000.874 kb on + strand, within MPMX20_01909at 2000.874 kb on + strand, within MPMX20_01909at 2000.874 kb on + strand, within MPMX20_01909at 2000.874 kb on + strand, within MPMX20_01909at 2000.882 kb on - strand, within MPMX20_01909at 2000.882 kb on - strand, within MPMX20_01909at 2000.928 kb on + strand, within MPMX20_01909at 2000.984 kb on + strand, within MPMX20_01909at 2001.040 kb on + strand, within MPMX20_01909at 2001.092 kb on + strand, within MPMX20_01909at 2001.193 kb on + strand, within MPMX20_01909at 2001.276 kb on - strandat 2001.334 kb on + strandat 2001.404 kb on + strandat 2001.412 kb on - strandat 2001.412 kb on - strandat 2001.412 kb on - strandat 2001.420 kb on - strandat 2001.475 kb on + strandat 2001.475 kb on + strandat 2001.475 kb on + strandat 2001.475 kb on + strandat 2001.475 kb on + strandat 2001.480 kb on + strandat 2001.483 kb on - strandat 2001.483 kb on - strandat 2001.483 kb on - strandat 2001.492 kb on + strandat 2001.500 kb on + strandat 2001.508 kb on - strandat 2001.508 kb on - strandat 2001.508 kb on - strandat 2001.508 kb on - strandat 2001.508 kb on - strandat 2001.538 kb on + strandat 2001.546 kb on - strandat 2001.598 kb on + strand, within MPMX20_01910at 2001.617 kb on + strand, within MPMX20_01910at 2001.639 kb on + strand, within MPMX20_01910at 2001.654 kb on - strand, within MPMX20_01910at 2001.705 kb on + strand, within MPMX20_01910at 2001.731 kb on + strand, within MPMX20_01910at 2001.731 kb on + strand, within MPMX20_01910at 2001.736 kb on + strand, within MPMX20_01910at 2001.739 kb on - strand, within MPMX20_01910at 2001.744 kb on - strand, within MPMX20_01910at 2001.744 kb on - strand, within MPMX20_01910at 2001.744 kb on - strand, within MPMX20_01910at 2001.794 kb on - strand, within MPMX20_01910at 2001.870 kb on + strand, within MPMX20_01910at 2001.894 kb on + strand, within MPMX20_01910at 2001.934 kb on + strand, within MPMX20_01910at 2001.934 kb on + strand, within MPMX20_01910at 2001.942 kb on - strand, within MPMX20_01910at 2001.963 kb on + strand, within MPMX20_01910at 2002.006 kb on - strand, within MPMX20_01910at 2002.029 kb on + strand, within MPMX20_01910at 2002.029 kb on + strand, within MPMX20_01910at 2002.225 kb on + strand, within MPMX20_01910at 2002.233 kb on - strand, within MPMX20_01910at 2002.254 kb on - strand, within MPMX20_01910at 2002.275 kb on + strand, within MPMX20_01910at 2002.275 kb on + strand, within MPMX20_01910at 2002.297 kb on + strand, within MPMX20_01910at 2002.379 kb on - strand, within MPMX20_01910at 2002.384 kb on - strand, within MPMX20_01910at 2002.429 kb on + strand, within MPMX20_01910at 2002.506 kb on + strand, within MPMX20_01910at 2002.516 kb on + strand, within MPMX20_01910at 2002.610 kb on - strandat 2002.640 kb on + strandat 2002.674 kb on - strandat 2002.854 kb on + strand, within MPMX20_01911at 2002.908 kb on - strand, within MPMX20_01911at 2002.989 kb on - strand, within MPMX20_01911at 2003.019 kb on + strand, within MPMX20_01911at 2003.027 kb on - strand, within MPMX20_01911at 2003.050 kb on + strand, within MPMX20_01911at 2003.050 kb on + strand, within MPMX20_01911at 2003.139 kb on - strand, within MPMX20_01911at 2003.158 kb on - strand, within MPMX20_01911at 2003.190 kb on + strand, within MPMX20_01911at 2003.295 kb on + strandat 2003.303 kb on - strandat 2003.350 kb on - strandat 2003.383 kb on + strandat 2003.464 kb on - strand, within MPMX20_01912at 2003.503 kb on + strand, within MPMX20_01912at 2003.530 kb on - strand, within MPMX20_01912at 2003.545 kb on + strand, within MPMX20_01912at 2003.553 kb on - strand, within MPMX20_01912at 2003.640 kb on + strand, within MPMX20_01912

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C)
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2,000,488 + MPMX20_01909 0.34 -1.3
2,000,559 + MPMX20_01909 0.39 -0.9
2,000,601 - MPMX20_01909 0.42 +0.4
2,000,617 + MPMX20_01909 0.43 +1.1
2,000,625 - MPMX20_01909 0.44 +0.5
2,000,725 + MPMX20_01909 0.51 +0.8
2,000,725 + MPMX20_01909 0.51 -0.9
2,000,733 - MPMX20_01909 0.52 -0.5
2,000,733 - MPMX20_01909 0.52 +0.9
2,000,733 - MPMX20_01909 0.52 -0.9
2,000,733 - MPMX20_01909 0.52 -0.4
2,000,733 - MPMX20_01909 0.52 +0.2
2,000,733 - MPMX20_01909 0.52 -2.1
2,000,733 - MPMX20_01909 0.52 -0.5
2,000,733 - MPMX20_01909 0.52 -0.2
2,000,777 - MPMX20_01909 0.55 +1.4
2,000,814 + MPMX20_01909 0.57 -0.9
2,000,814 + MPMX20_01909 0.57 -0.0
2,000,814 + MPMX20_01909 0.57 -1.7
2,000,822 - MPMX20_01909 0.58 -0.1
2,000,824 + MPMX20_01909 0.58 -0.1
2,000,832 - MPMX20_01909 0.59 +0.9
2,000,832 - MPMX20_01909 0.59 +0.3
2,000,832 - MPMX20_01909 0.59 +0.5
2,000,832 - MPMX20_01909 0.59 +0.4
2,000,852 + MPMX20_01909 0.60 -0.0
2,000,865 - MPMX20_01909 0.61 +0.4
2,000,865 - MPMX20_01909 0.61 -0.7
2,000,874 + MPMX20_01909 0.62 -0.3
2,000,874 + MPMX20_01909 0.62 -0.2
2,000,874 + MPMX20_01909 0.62 -0.4
2,000,874 + MPMX20_01909 0.62 +0.8
2,000,874 + MPMX20_01909 0.62 +0.6
2,000,882 - MPMX20_01909 0.62 +1.5
2,000,882 - MPMX20_01909 0.62 +0.1
2,000,928 + MPMX20_01909 0.66 -0.1
2,000,984 + MPMX20_01909 0.70 +0.3
2,001,040 + MPMX20_01909 0.74 -0.6
2,001,092 + MPMX20_01909 0.77 +0.5
2,001,193 + MPMX20_01909 0.85 +0.6
2,001,276 - +0.1
2,001,334 + -0.1
2,001,404 + -2.6
2,001,412 - -2.6
2,001,412 - +1.6
2,001,412 - +0.2
2,001,420 - +0.3
2,001,475 + +0.8
2,001,475 + -0.2
2,001,475 + +0.2
2,001,475 + -0.1
2,001,475 + -2.6
2,001,480 + +0.5
2,001,483 - -0.5
2,001,483 - -0.6
2,001,483 - -0.1
2,001,492 + +0.9
2,001,500 + +0.2
2,001,508 - -2.6
2,001,508 - -0.6
2,001,508 - +0.5
2,001,508 - -0.0
2,001,508 - +0.1
2,001,538 + +0.8
2,001,546 - -1.2
2,001,598 + MPMX20_01910 0.11 +0.3
2,001,617 + MPMX20_01910 0.13 -0.5
2,001,639 + MPMX20_01910 0.15 -1.0
2,001,654 - MPMX20_01910 0.16 -0.8
2,001,705 + MPMX20_01910 0.20 +0.5
2,001,731 + MPMX20_01910 0.23 +0.5
2,001,731 + MPMX20_01910 0.23 +0.2
2,001,736 + MPMX20_01910 0.23 +0.7
2,001,739 - MPMX20_01910 0.23 +0.2
2,001,744 - MPMX20_01910 0.24 -0.1
2,001,744 - MPMX20_01910 0.24 -0.6
2,001,744 - MPMX20_01910 0.24 +0.2
2,001,794 - MPMX20_01910 0.28 -0.1
2,001,870 + MPMX20_01910 0.34 +0.2
2,001,894 + MPMX20_01910 0.36 +0.6
2,001,934 + MPMX20_01910 0.40 -0.7
2,001,934 + MPMX20_01910 0.40 +0.1
2,001,942 - MPMX20_01910 0.41 -1.1
2,001,963 + MPMX20_01910 0.42 +1.6
2,002,006 - MPMX20_01910 0.46 +0.9
2,002,029 + MPMX20_01910 0.48 +0.1
2,002,029 + MPMX20_01910 0.48 +0.5
2,002,225 + MPMX20_01910 0.64 -1.2
2,002,233 - MPMX20_01910 0.65 +0.6
2,002,254 - MPMX20_01910 0.67 -0.6
2,002,275 + MPMX20_01910 0.69 -0.6
2,002,275 + MPMX20_01910 0.69 -0.0
2,002,297 + MPMX20_01910 0.71 -1.3
2,002,379 - MPMX20_01910 0.77 +0.3
2,002,384 - MPMX20_01910 0.78 -1.0
2,002,429 + MPMX20_01910 0.82 -1.5
2,002,506 + MPMX20_01910 0.88 +0.3
2,002,516 + MPMX20_01910 0.89 -0.2
2,002,610 - -0.4
2,002,640 + -0.0
2,002,674 - +0.2
2,002,854 + MPMX20_01911 0.30 +0.1
2,002,908 - MPMX20_01911 0.39 -1.2
2,002,989 - MPMX20_01911 0.51 +0.2
2,003,019 + MPMX20_01911 0.56 +0.0
2,003,027 - MPMX20_01911 0.57 +0.6
2,003,050 + MPMX20_01911 0.60 -0.5
2,003,050 + MPMX20_01911 0.60 +0.8
2,003,139 - MPMX20_01911 0.74 +0.9
2,003,158 - MPMX20_01911 0.77 -0.1
2,003,190 + MPMX20_01911 0.82 +1.2
2,003,295 + -1.1
2,003,303 - +0.3
2,003,350 - -0.6
2,003,383 + +0.8
2,003,464 - MPMX20_01912 0.21 +0.1
2,003,503 + MPMX20_01912 0.27 +0.3
2,003,530 - MPMX20_01912 0.31 -1.3
2,003,545 + MPMX20_01912 0.33 +0.2
2,003,553 - MPMX20_01912 0.34 -0.3
2,003,640 + MPMX20_01912 0.46 +0.4

Or see this region's nucleotide sequence