Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00231

Experiment: Tween 20 (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00230 and MPMX20_00231 are separated by 270 nucleotidesMPMX20_00231 and MPMX20_00232 are separated by 31 nucleotides MPMX20_00230: MPMX20_00230 - Homoserine O-succinyltransferase, at 241,315 to 242,244 _00230 MPMX20_00231: MPMX20_00231 - Malate synthase A, at 242,515 to 244,116 _00231 MPMX20_00232: MPMX20_00232 - Isocitrate lyase, at 244,148 to 245,452 _00232 Position (kb) 242 243 244 245Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 241.556 kb on + strand, within MPMX20_00230at 241.639 kb on + strand, within MPMX20_00230at 241.647 kb on - strand, within MPMX20_00230at 241.693 kb on + strand, within MPMX20_00230at 241.711 kb on - strand, within MPMX20_00230at 241.755 kb on - strand, within MPMX20_00230at 241.764 kb on - strand, within MPMX20_00230at 241.811 kb on - strand, within MPMX20_00230at 241.829 kb on + strand, within MPMX20_00230at 241.854 kb on - strand, within MPMX20_00230at 241.922 kb on - strand, within MPMX20_00230at 241.931 kb on - strand, within MPMX20_00230at 242.008 kb on + strand, within MPMX20_00230at 242.064 kb on + strand, within MPMX20_00230at 242.065 kb on + strand, within MPMX20_00230at 242.108 kb on - strand, within MPMX20_00230at 242.471 kb on + strandat 242.549 kb on + strandat 242.801 kb on + strand, within MPMX20_00231at 242.876 kb on + strand, within MPMX20_00231at 242.906 kb on - strand, within MPMX20_00231at 242.980 kb on + strand, within MPMX20_00231at 242.998 kb on + strand, within MPMX20_00231at 242.998 kb on + strand, within MPMX20_00231at 243.006 kb on - strand, within MPMX20_00231at 243.006 kb on - strand, within MPMX20_00231at 243.011 kb on - strand, within MPMX20_00231at 243.027 kb on - strand, within MPMX20_00231at 243.084 kb on - strand, within MPMX20_00231at 243.161 kb on - strand, within MPMX20_00231at 243.165 kb on + strand, within MPMX20_00231at 243.247 kb on - strand, within MPMX20_00231at 243.277 kb on - strand, within MPMX20_00231at 243.280 kb on - strand, within MPMX20_00231at 243.314 kb on + strand, within MPMX20_00231at 243.330 kb on + strand, within MPMX20_00231at 243.333 kb on - strand, within MPMX20_00231at 243.353 kb on + strand, within MPMX20_00231at 243.371 kb on - strand, within MPMX20_00231at 243.419 kb on - strand, within MPMX20_00231at 243.424 kb on + strand, within MPMX20_00231at 243.454 kb on - strand, within MPMX20_00231at 243.459 kb on + strand, within MPMX20_00231at 243.459 kb on + strand, within MPMX20_00231at 243.459 kb on + strand, within MPMX20_00231at 243.558 kb on + strand, within MPMX20_00231at 243.566 kb on - strand, within MPMX20_00231at 243.718 kb on + strand, within MPMX20_00231at 243.740 kb on + strand, within MPMX20_00231at 243.752 kb on + strand, within MPMX20_00231at 243.798 kb on - strand, within MPMX20_00231at 243.825 kb on - strand, within MPMX20_00231at 243.830 kb on - strand, within MPMX20_00231at 243.854 kb on - strand, within MPMX20_00231at 243.926 kb on - strand, within MPMX20_00231at 244.138 kb on - strandat 244.139 kb on + strandat 244.195 kb on - strandat 244.233 kb on + strandat 244.278 kb on + strandat 244.286 kb on - strand, within MPMX20_00232at 244.296 kb on - strand, within MPMX20_00232at 244.313 kb on + strand, within MPMX20_00232at 244.321 kb on - strand, within MPMX20_00232at 244.445 kb on + strand, within MPMX20_00232at 244.464 kb on + strand, within MPMX20_00232at 244.496 kb on + strand, within MPMX20_00232at 244.541 kb on + strand, within MPMX20_00232at 244.554 kb on - strand, within MPMX20_00232at 244.563 kb on + strand, within MPMX20_00232at 244.576 kb on - strand, within MPMX20_00232at 244.636 kb on - strand, within MPMX20_00232at 244.636 kb on - strand, within MPMX20_00232at 244.650 kb on + strand, within MPMX20_00232at 244.650 kb on + strand, within MPMX20_00232at 244.650 kb on + strand, within MPMX20_00232at 244.658 kb on - strand, within MPMX20_00232at 244.658 kb on - strand, within MPMX20_00232at 244.757 kb on + strand, within MPMX20_00232at 244.798 kb on + strand, within MPMX20_00232at 244.798 kb on + strand, within MPMX20_00232at 244.840 kb on - strand, within MPMX20_00232at 244.841 kb on - strand, within MPMX20_00232at 244.856 kb on - strand, within MPMX20_00232at 244.865 kb on - strand, within MPMX20_00232at 244.894 kb on - strand, within MPMX20_00232at 244.900 kb on + strand, within MPMX20_00232at 244.920 kb on + strand, within MPMX20_00232at 244.930 kb on + strand, within MPMX20_00232at 244.936 kb on - strand, within MPMX20_00232at 244.968 kb on + strand, within MPMX20_00232at 244.976 kb on - strand, within MPMX20_00232at 244.988 kb on - strand, within MPMX20_00232at 244.997 kb on + strand, within MPMX20_00232at 244.997 kb on + strand, within MPMX20_00232at 245.005 kb on - strand, within MPMX20_00232at 245.055 kb on + strand, within MPMX20_00232at 245.090 kb on + strand, within MPMX20_00232at 245.098 kb on - strand, within MPMX20_00232at 245.098 kb on - strand, within MPMX20_00232at 245.098 kb on - strand, within MPMX20_00232at 245.098 kb on - strand, within MPMX20_00232at 245.098 kb on - strand, within MPMX20_00232at 245.098 kb on - strand, within MPMX20_00232

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C)
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241,556 + MPMX20_00230 0.26 -2.7
241,639 + MPMX20_00230 0.35 -3.3
241,647 - MPMX20_00230 0.36 -2.6
241,693 + MPMX20_00230 0.41 -2.2
241,711 - MPMX20_00230 0.43 -1.1
241,755 - MPMX20_00230 0.47 -3.3
241,764 - MPMX20_00230 0.48 -3.7
241,811 - MPMX20_00230 0.53 -2.8
241,829 + MPMX20_00230 0.55 -1.8
241,854 - MPMX20_00230 0.58 -2.6
241,922 - MPMX20_00230 0.65 -2.6
241,931 - MPMX20_00230 0.66 -1.5
242,008 + MPMX20_00230 0.75 -2.9
242,064 + MPMX20_00230 0.81 -2.5
242,065 + MPMX20_00230 0.81 -1.6
242,108 - MPMX20_00230 0.85 -1.6
242,471 + -0.0
242,549 + -2.5
242,801 + MPMX20_00231 0.18 -1.8
242,876 + MPMX20_00231 0.23 -3.7
242,906 - MPMX20_00231 0.24 -2.3
242,980 + MPMX20_00231 0.29 -1.6
242,998 + MPMX20_00231 0.30 -2.3
242,998 + MPMX20_00231 0.30 -0.5
243,006 - MPMX20_00231 0.31 -2.7
243,006 - MPMX20_00231 0.31 -3.3
243,011 - MPMX20_00231 0.31 -0.7
243,027 - MPMX20_00231 0.32 -4.1
243,084 - MPMX20_00231 0.36 -1.4
243,161 - MPMX20_00231 0.40 -3.0
243,165 + MPMX20_00231 0.41 -2.4
243,247 - MPMX20_00231 0.46 -3.9
243,277 - MPMX20_00231 0.48 -2.2
243,280 - MPMX20_00231 0.48 -1.2
243,314 + MPMX20_00231 0.50 -1.8
243,330 + MPMX20_00231 0.51 -4.4
243,333 - MPMX20_00231 0.51 -2.9
243,353 + MPMX20_00231 0.52 -4.1
243,371 - MPMX20_00231 0.53 -3.0
243,419 - MPMX20_00231 0.56 -2.3
243,424 + MPMX20_00231 0.57 -3.6
243,454 - MPMX20_00231 0.59 -3.7
243,459 + MPMX20_00231 0.59 -3.8
243,459 + MPMX20_00231 0.59 -5.1
243,459 + MPMX20_00231 0.59 -0.7
243,558 + MPMX20_00231 0.65 -2.1
243,566 - MPMX20_00231 0.66 -2.1
243,718 + MPMX20_00231 0.75 +0.5
243,740 + MPMX20_00231 0.76 -3.7
243,752 + MPMX20_00231 0.77 -2.1
243,798 - MPMX20_00231 0.80 -4.9
243,825 - MPMX20_00231 0.82 +0.1
243,830 - MPMX20_00231 0.82 -3.8
243,854 - MPMX20_00231 0.84 -3.6
243,926 - MPMX20_00231 0.88 -2.3
244,138 - -2.1
244,139 + -0.5
244,195 - -2.0
244,233 + +0.1
244,278 + -0.3
244,286 - MPMX20_00232 0.11 -2.5
244,296 - MPMX20_00232 0.11 -3.0
244,313 + MPMX20_00232 0.13 -4.8
244,321 - MPMX20_00232 0.13 -3.3
244,445 + MPMX20_00232 0.23 -3.1
244,464 + MPMX20_00232 0.24 -2.3
244,496 + MPMX20_00232 0.27 -1.3
244,541 + MPMX20_00232 0.30 -3.8
244,554 - MPMX20_00232 0.31 -4.6
244,563 + MPMX20_00232 0.32 -1.8
244,576 - MPMX20_00232 0.33 -1.7
244,636 - MPMX20_00232 0.37 +0.2
244,636 - MPMX20_00232 0.37 -3.6
244,650 + MPMX20_00232 0.38 -3.6
244,650 + MPMX20_00232 0.38 -3.0
244,650 + MPMX20_00232 0.38 -2.5
244,658 - MPMX20_00232 0.39 -1.3
244,658 - MPMX20_00232 0.39 -2.0
244,757 + MPMX20_00232 0.47 -4.7
244,798 + MPMX20_00232 0.50 +0.1
244,798 + MPMX20_00232 0.50 -0.9
244,840 - MPMX20_00232 0.53 -1.9
244,841 - MPMX20_00232 0.53 -2.6
244,856 - MPMX20_00232 0.54 -3.7
244,865 - MPMX20_00232 0.55 -2.5
244,894 - MPMX20_00232 0.57 -3.0
244,900 + MPMX20_00232 0.58 -1.7
244,920 + MPMX20_00232 0.59 -3.6
244,930 + MPMX20_00232 0.60 -1.6
244,936 - MPMX20_00232 0.60 -3.4
244,968 + MPMX20_00232 0.63 -3.8
244,976 - MPMX20_00232 0.63 -0.9
244,988 - MPMX20_00232 0.64 +0.1
244,997 + MPMX20_00232 0.65 -4.0
244,997 + MPMX20_00232 0.65 -1.6
245,005 - MPMX20_00232 0.66 -0.3
245,055 + MPMX20_00232 0.70 -3.8
245,090 + MPMX20_00232 0.72 -2.5
245,098 - MPMX20_00232 0.73 -4.4
245,098 - MPMX20_00232 0.73 -4.1
245,098 - MPMX20_00232 0.73 -2.9
245,098 - MPMX20_00232 0.73 -1.1
245,098 - MPMX20_00232 0.73 -2.8
245,098 - MPMX20_00232 0.73 -3.8

Or see this region's nucleotide sequence