Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04640 and MPMX20_04641 overlap by 1 nucleotides MPMX20_04641 and MPMX20_04642 are separated by 47 nucleotides MPMX20_04642 and MPMX20_04643 are separated by 14 nucleotides MPMX20_04643 and MPMX20_04644 are separated by 84 nucleotides
MPMX20_04640: MPMX20_04640 - Phosphate transport system permease protein PstC, at 4,860,963 to 4,861,922
_04640
MPMX20_04641: MPMX20_04641 - Phosphate transport system permease protein PstA, at 4,861,922 to 4,862,812
_04641
MPMX20_04642: MPMX20_04642 - Phosphate import ATP-binding protein PstB, at 4,862,860 to 4,863,633
_04642
MPMX20_04643: MPMX20_04643 - Phosphate-specific transport system accessory protein PhoU, at 4,863,648 to 4,864,373
_04643
MPMX20_04644: MPMX20_04644 - 6-phosphogluconate phosphatase, at 4,864,458 to 4,865,123
_04644
Position (kb)
4862
4863
4864 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4861.880 kb on + strand at 4861.950 kb on - strand at 4862.009 kb on + strand at 4862.020 kb on + strand, within MPMX20_04641 at 4862.047 kb on + strand, within MPMX20_04641 at 4862.047 kb on + strand, within MPMX20_04641 at 4862.047 kb on + strand, within MPMX20_04641 at 4862.055 kb on - strand, within MPMX20_04641 at 4862.055 kb on - strand, within MPMX20_04641 at 4862.263 kb on + strand, within MPMX20_04641 at 4862.435 kb on + strand, within MPMX20_04641 at 4862.435 kb on + strand, within MPMX20_04641 at 4862.629 kb on + strand, within MPMX20_04641 at 4862.637 kb on - strand, within MPMX20_04641 at 4862.727 kb on + strand at 4862.735 kb on + strand at 4862.742 kb on + strand at 4862.742 kb on + strand at 4862.742 kb on + strand at 4862.742 kb on + strand at 4862.742 kb on + strand at 4862.805 kb on - strand at 4863.047 kb on + strand, within MPMX20_04642 at 4863.047 kb on + strand, within MPMX20_04642 at 4863.055 kb on - strand, within MPMX20_04642 at 4863.055 kb on - strand, within MPMX20_04642 at 4863.055 kb on - strand, within MPMX20_04642 at 4863.055 kb on - strand, within MPMX20_04642 at 4863.264 kb on - strand, within MPMX20_04642 at 4863.414 kb on - strand, within MPMX20_04642 at 4863.686 kb on + strand at 4863.686 kb on + strand at 4863.686 kb on + strand at 4863.686 kb on + strand at 4863.686 kb on + strand at 4864.529 kb on - strand, within MPMX20_04644
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 4,861,880 + -2.5 4,861,950 - -0.4 4,862,009 + -0.4 4,862,020 + MPMX20_04641 0.11 +0.9 4,862,047 + MPMX20_04641 0.14 -1.2 4,862,047 + MPMX20_04641 0.14 +2.4 4,862,047 + MPMX20_04641 0.14 -1.5 4,862,055 - MPMX20_04641 0.15 -0.6 4,862,055 - MPMX20_04641 0.15 -0.6 4,862,263 + MPMX20_04641 0.38 -0.1 4,862,435 + MPMX20_04641 0.58 +0.4 4,862,435 + MPMX20_04641 0.58 -0.2 4,862,629 + MPMX20_04641 0.79 -2.4 4,862,637 - MPMX20_04641 0.80 +0.1 4,862,727 + -1.2 4,862,735 + -2.9 4,862,742 + -0.4 4,862,742 + +1.1 4,862,742 + -0.6 4,862,742 + -0.2 4,862,742 + -0.0 4,862,805 - -0.0 4,863,047 + MPMX20_04642 0.24 -0.4 4,863,047 + MPMX20_04642 0.24 -0.4 4,863,055 - MPMX20_04642 0.25 -1.6 4,863,055 - MPMX20_04642 0.25 -0.9 4,863,055 - MPMX20_04642 0.25 +1.7 4,863,055 - MPMX20_04642 0.25 -0.9 4,863,264 - MPMX20_04642 0.52 -0.6 4,863,414 - MPMX20_04642 0.72 -0.8 4,863,686 + +2.0 4,863,686 + -0.4 4,863,686 + +0.4 4,863,686 + +1.1 4,863,686 + -0.2 4,864,529 - MPMX20_04644 0.11 -1.3
Or see this region's nucleotide sequence