Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00768

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00767 and MPMX20_00768 are separated by 2 nucleotidesMPMX20_00768 and MPMX20_00769 overlap by 1 nucleotides MPMX20_00767: MPMX20_00767 - 3-isopropylmalate dehydratase large subunit 1, at 798,500 to 799,900 _00767 MPMX20_00768: MPMX20_00768 - 3-isopropylmalate dehydrogenase, at 799,903 to 800,994 _00768 MPMX20_00769: MPMX20_00769 - 2-isopropylmalate synthase, at 800,994 to 802,565 _00769 Position (kb) 799 800 801Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 798.922 kb on - strand, within MPMX20_00767at 798.932 kb on - strand, within MPMX20_00767at 798.932 kb on - strand, within MPMX20_00767at 798.932 kb on - strand, within MPMX20_00767at 798.937 kb on - strand, within MPMX20_00767at 799.023 kb on - strand, within MPMX20_00767at 799.087 kb on - strand, within MPMX20_00767at 799.110 kb on - strand, within MPMX20_00767at 799.130 kb on - strand, within MPMX20_00767at 799.164 kb on - strand, within MPMX20_00767at 799.186 kb on - strand, within MPMX20_00767at 799.246 kb on + strand, within MPMX20_00767at 799.246 kb on + strand, within MPMX20_00767at 799.266 kb on - strand, within MPMX20_00767at 799.303 kb on + strand, within MPMX20_00767at 799.478 kb on + strand, within MPMX20_00767at 799.532 kb on + strand, within MPMX20_00767at 799.532 kb on + strand, within MPMX20_00767at 799.553 kb on + strand, within MPMX20_00767at 799.558 kb on + strand, within MPMX20_00767at 799.558 kb on + strand, within MPMX20_00767at 799.561 kb on - strand, within MPMX20_00767at 799.566 kb on - strand, within MPMX20_00767at 799.598 kb on + strand, within MPMX20_00767at 799.697 kb on - strand, within MPMX20_00767at 799.707 kb on - strand, within MPMX20_00767at 799.730 kb on + strand, within MPMX20_00767at 799.730 kb on + strand, within MPMX20_00767at 799.731 kb on + strand, within MPMX20_00767at 799.791 kb on - strandat 799.791 kb on - strandat 799.815 kb on - strandat 799.821 kb on + strandat 799.821 kb on + strandat 799.841 kb on + strandat 799.842 kb on - strandat 799.850 kb on + strandat 799.900 kb on + strandat 799.901 kb on + strandat 799.909 kb on - strandat 799.952 kb on + strandat 799.960 kb on - strandat 799.997 kb on + strandat 800.003 kb on - strandat 800.077 kb on + strand, within MPMX20_00768at 800.079 kb on - strand, within MPMX20_00768at 800.150 kb on + strand, within MPMX20_00768at 800.158 kb on - strand, within MPMX20_00768at 800.160 kb on + strand, within MPMX20_00768at 800.160 kb on + strand, within MPMX20_00768at 800.168 kb on - strand, within MPMX20_00768at 800.168 kb on - strand, within MPMX20_00768at 800.177 kb on - strand, within MPMX20_00768at 800.189 kb on - strand, within MPMX20_00768at 800.199 kb on + strand, within MPMX20_00768at 800.212 kb on + strand, within MPMX20_00768at 800.216 kb on - strand, within MPMX20_00768at 800.253 kb on + strand, within MPMX20_00768at 800.253 kb on + strand, within MPMX20_00768at 800.253 kb on + strand, within MPMX20_00768at 800.253 kb on + strand, within MPMX20_00768at 800.253 kb on + strand, within MPMX20_00768at 800.253 kb on + strand, within MPMX20_00768at 800.258 kb on + strand, within MPMX20_00768at 800.261 kb on - strand, within MPMX20_00768at 800.261 kb on - strand, within MPMX20_00768at 800.261 kb on - strand, within MPMX20_00768at 800.261 kb on - strand, within MPMX20_00768at 800.261 kb on - strand, within MPMX20_00768at 800.261 kb on - strand, within MPMX20_00768at 800.266 kb on - strand, within MPMX20_00768at 800.270 kb on + strand, within MPMX20_00768at 800.288 kb on + strand, within MPMX20_00768at 800.332 kb on - strand, within MPMX20_00768at 800.332 kb on - strand, within MPMX20_00768at 800.342 kb on + strand, within MPMX20_00768at 800.474 kb on - strand, within MPMX20_00768at 800.497 kb on - strand, within MPMX20_00768at 800.543 kb on + strand, within MPMX20_00768at 800.551 kb on - strand, within MPMX20_00768at 800.553 kb on + strand, within MPMX20_00768at 800.558 kb on + strand, within MPMX20_00768at 800.771 kb on + strand, within MPMX20_00768at 800.779 kb on + strand, within MPMX20_00768at 800.829 kb on + strand, within MPMX20_00768at 800.862 kb on + strand, within MPMX20_00768at 800.870 kb on - strand, within MPMX20_00768at 800.870 kb on - strand, within MPMX20_00768at 800.940 kb on + strandat 800.962 kb on + strandat 800.968 kb on - strandat 800.999 kb on - strandat 800.999 kb on - strandat 801.021 kb on + strandat 801.028 kb on + strandat 801.029 kb on - strandat 801.029 kb on - strandat 801.088 kb on + strandat 801.128 kb on + strandat 801.128 kb on + strandat 801.128 kb on + strandat 801.136 kb on - strandat 801.136 kb on - strandat 801.136 kb on - strandat 801.136 kb on - strandat 801.177 kb on - strand, within MPMX20_00769at 801.183 kb on - strand, within MPMX20_00769at 801.183 kb on - strand, within MPMX20_00769at 801.185 kb on + strand, within MPMX20_00769at 801.187 kb on - strand, within MPMX20_00769at 801.201 kb on + strand, within MPMX20_00769at 801.209 kb on - strand, within MPMX20_00769at 801.215 kb on + strand, within MPMX20_00769at 801.230 kb on + strand, within MPMX20_00769at 801.230 kb on + strand, within MPMX20_00769at 801.230 kb on + strand, within MPMX20_00769at 801.238 kb on - strand, within MPMX20_00769at 801.238 kb on - strand, within MPMX20_00769at 801.238 kb on - strand, within MPMX20_00769at 801.238 kb on - strand, within MPMX20_00769at 801.315 kb on - strand, within MPMX20_00769at 801.323 kb on - strand, within MPMX20_00769at 801.339 kb on - strand, within MPMX20_00769at 801.374 kb on + strand, within MPMX20_00769at 801.398 kb on + strand, within MPMX20_00769at 801.406 kb on - strand, within MPMX20_00769at 801.443 kb on + strand, within MPMX20_00769at 801.501 kb on - strand, within MPMX20_00769at 801.532 kb on - strand, within MPMX20_00769at 801.549 kb on + strand, within MPMX20_00769at 801.799 kb on + strand, within MPMX20_00769at 801.849 kb on + strand, within MPMX20_00769at 801.857 kb on - strand, within MPMX20_00769at 801.912 kb on - strand, within MPMX20_00769at 801.941 kb on + strand, within MPMX20_00769at 801.941 kb on + strand, within MPMX20_00769at 801.941 kb on + strand, within MPMX20_00769at 801.950 kb on - strand, within MPMX20_00769at 801.952 kb on + strand, within MPMX20_00769at 801.969 kb on - strand, within MPMX20_00769

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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798,922 - MPMX20_00767 0.30 -3.1
798,932 - MPMX20_00767 0.31 -1.3
798,932 - MPMX20_00767 0.31 -3.3
798,932 - MPMX20_00767 0.31 +1.2
798,937 - MPMX20_00767 0.31 -2.1
799,023 - MPMX20_00767 0.37 -0.3
799,087 - MPMX20_00767 0.42 -3.1
799,110 - MPMX20_00767 0.44 -0.8
799,130 - MPMX20_00767 0.45 -3.1
799,164 - MPMX20_00767 0.47 -1.9
799,186 - MPMX20_00767 0.49 -0.9
799,246 + MPMX20_00767 0.53 -4.0
799,246 + MPMX20_00767 0.53 -0.1
799,266 - MPMX20_00767 0.55 -2.0
799,303 + MPMX20_00767 0.57 -4.6
799,478 + MPMX20_00767 0.70 -1.3
799,532 + MPMX20_00767 0.74 -1.9
799,532 + MPMX20_00767 0.74 -1.2
799,553 + MPMX20_00767 0.75 -2.5
799,558 + MPMX20_00767 0.76 -3.2
799,558 + MPMX20_00767 0.76 -3.9
799,561 - MPMX20_00767 0.76 -2.1
799,566 - MPMX20_00767 0.76 -3.5
799,598 + MPMX20_00767 0.78 +0.2
799,697 - MPMX20_00767 0.85 -1.2
799,707 - MPMX20_00767 0.86 -2.8
799,730 + MPMX20_00767 0.88 -1.0
799,730 + MPMX20_00767 0.88 -3.2
799,731 + MPMX20_00767 0.88 -1.4
799,791 - -3.0
799,791 - -2.1
799,815 - -3.5
799,821 + -2.2
799,821 + -3.7
799,841 + -2.3
799,842 - -1.9
799,850 + -3.7
799,900 + -0.8
799,901 + -1.5
799,909 - +1.1
799,952 + -2.6
799,960 - -2.1
799,997 + -4.0
800,003 - -2.7
800,077 + MPMX20_00768 0.16 -3.5
800,079 - MPMX20_00768 0.16 -4.1
800,150 + MPMX20_00768 0.23 -3.3
800,158 - MPMX20_00768 0.23 -3.5
800,160 + MPMX20_00768 0.24 -0.6
800,160 + MPMX20_00768 0.24 -1.3
800,168 - MPMX20_00768 0.24 -2.3
800,168 - MPMX20_00768 0.24 -1.1
800,177 - MPMX20_00768 0.25 -2.7
800,189 - MPMX20_00768 0.26 -3.2
800,199 + MPMX20_00768 0.27 -3.3
800,212 + MPMX20_00768 0.28 -0.4
800,216 - MPMX20_00768 0.29 -2.3
800,253 + MPMX20_00768 0.32 +0.6
800,253 + MPMX20_00768 0.32 +0.2
800,253 + MPMX20_00768 0.32 -4.3
800,253 + MPMX20_00768 0.32 -5.2
800,253 + MPMX20_00768 0.32 -1.9
800,253 + MPMX20_00768 0.32 -3.2
800,258 + MPMX20_00768 0.33 -1.1
800,261 - MPMX20_00768 0.33 -4.8
800,261 - MPMX20_00768 0.33 -0.9
800,261 - MPMX20_00768 0.33 -2.6
800,261 - MPMX20_00768 0.33 -1.4
800,261 - MPMX20_00768 0.33 -2.2
800,261 - MPMX20_00768 0.33 -3.2
800,266 - MPMX20_00768 0.33 -4.2
800,270 + MPMX20_00768 0.34 -2.9
800,288 + MPMX20_00768 0.35 -1.1
800,332 - MPMX20_00768 0.39 -2.9
800,332 - MPMX20_00768 0.39 -3.0
800,342 + MPMX20_00768 0.40 -0.9
800,474 - MPMX20_00768 0.52 -2.4
800,497 - MPMX20_00768 0.54 -3.0
800,543 + MPMX20_00768 0.59 -4.3
800,551 - MPMX20_00768 0.59 -3.1
800,553 + MPMX20_00768 0.60 -4.5
800,558 + MPMX20_00768 0.60 -1.3
800,771 + MPMX20_00768 0.79 -3.2
800,779 + MPMX20_00768 0.80 -0.1
800,829 + MPMX20_00768 0.85 +0.2
800,862 + MPMX20_00768 0.88 -1.3
800,870 - MPMX20_00768 0.89 -2.0
800,870 - MPMX20_00768 0.89 -3.3
800,940 + -2.2
800,962 + -2.4
800,968 - -3.7
800,999 - -1.7
800,999 - +0.5
801,021 + -1.6
801,028 + -2.3
801,029 - -0.9
801,029 - +0.5
801,088 + -0.1
801,128 + -1.1
801,128 + -3.8
801,128 + +0.9
801,136 - -0.7
801,136 - +0.1
801,136 - -1.2
801,136 - -0.8
801,177 - MPMX20_00769 0.12 -0.8
801,183 - MPMX20_00769 0.12 -2.3
801,183 - MPMX20_00769 0.12 +0.6
801,185 + MPMX20_00769 0.12 -3.5
801,187 - MPMX20_00769 0.12 +0.8
801,201 + MPMX20_00769 0.13 -3.5
801,209 - MPMX20_00769 0.14 +3.0
801,215 + MPMX20_00769 0.14 -3.7
801,230 + MPMX20_00769 0.15 -1.4
801,230 + MPMX20_00769 0.15 -2.4
801,230 + MPMX20_00769 0.15 -1.3
801,238 - MPMX20_00769 0.16 -0.6
801,238 - MPMX20_00769 0.16 -0.3
801,238 - MPMX20_00769 0.16 -0.7
801,238 - MPMX20_00769 0.16 -4.3
801,315 - MPMX20_00769 0.20 -1.7
801,323 - MPMX20_00769 0.21 +1.4
801,339 - MPMX20_00769 0.22 +0.7
801,374 + MPMX20_00769 0.24 -3.6
801,398 + MPMX20_00769 0.26 -3.0
801,406 - MPMX20_00769 0.26 +0.1
801,443 + MPMX20_00769 0.29 -2.8
801,501 - MPMX20_00769 0.32 -2.1
801,532 - MPMX20_00769 0.34 -4.4
801,549 + MPMX20_00769 0.35 -3.1
801,799 + MPMX20_00769 0.51 -0.9
801,849 + MPMX20_00769 0.54 -2.4
801,857 - MPMX20_00769 0.55 -4.0
801,912 - MPMX20_00769 0.58 -1.3
801,941 + MPMX20_00769 0.60 -4.7
801,941 + MPMX20_00769 0.60 -2.3
801,941 + MPMX20_00769 0.60 -4.3
801,950 - MPMX20_00769 0.61 -1.5
801,952 + MPMX20_00769 0.61 -2.0
801,969 - MPMX20_00769 0.62 -0.7

Or see this region's nucleotide sequence