Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00767

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00765 and MPMX20_00766 are separated by 201 nucleotidesMPMX20_00766 and MPMX20_00767 are separated by 10 nucleotidesMPMX20_00767 and MPMX20_00768 are separated by 2 nucleotides MPMX20_00765: MPMX20_00765 - Sugar efflux transporter A, at 796,504 to 797,682 _00765 MPMX20_00766: MPMX20_00766 - 3-isopropylmalate dehydratase small subunit 1, at 797,884 to 798,489 _00766 MPMX20_00767: MPMX20_00767 - 3-isopropylmalate dehydratase large subunit 1, at 798,500 to 799,900 _00767 MPMX20_00768: MPMX20_00768 - 3-isopropylmalate dehydrogenase, at 799,903 to 800,994 _00768 Position (kb) 798 799 800Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 797.515 kb on + strand, within MPMX20_00765at 797.543 kb on + strand, within MPMX20_00765at 797.611 kb on + strandat 797.636 kb on + strandat 797.660 kb on - strandat 797.675 kb on - strandat 797.724 kb on + strandat 797.735 kb on + strandat 797.758 kb on + strandat 797.759 kb on - strandat 797.808 kb on - strandat 797.823 kb on - strandat 797.882 kb on + strandat 797.883 kb on - strandat 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.957 kb on - strand, within MPMX20_00766at 797.959 kb on + strand, within MPMX20_00766at 797.967 kb on - strand, within MPMX20_00766at 797.967 kb on - strand, within MPMX20_00766at 798.077 kb on + strand, within MPMX20_00766at 798.085 kb on - strand, within MPMX20_00766at 798.192 kb on + strand, within MPMX20_00766at 798.220 kb on + strand, within MPMX20_00766at 798.324 kb on - strand, within MPMX20_00766at 798.392 kb on - strand, within MPMX20_00766at 798.564 kb on - strandat 798.566 kb on + strandat 798.566 kb on + strandat 798.574 kb on - strandat 798.626 kb on + strandat 798.659 kb on + strand, within MPMX20_00767at 798.738 kb on - strand, within MPMX20_00767at 798.760 kb on + strand, within MPMX20_00767at 798.760 kb on + strand, within MPMX20_00767at 798.895 kb on - strand, within MPMX20_00767at 798.895 kb on - strand, within MPMX20_00767at 798.896 kb on + strand, within MPMX20_00767at 798.922 kb on - strand, within MPMX20_00767at 798.932 kb on - strand, within MPMX20_00767at 798.932 kb on - strand, within MPMX20_00767at 798.932 kb on - strand, within MPMX20_00767at 798.937 kb on - strand, within MPMX20_00767at 799.023 kb on - strand, within MPMX20_00767at 799.087 kb on - strand, within MPMX20_00767at 799.110 kb on - strand, within MPMX20_00767at 799.130 kb on - strand, within MPMX20_00767at 799.164 kb on - strand, within MPMX20_00767at 799.186 kb on - strand, within MPMX20_00767at 799.246 kb on + strand, within MPMX20_00767at 799.246 kb on + strand, within MPMX20_00767at 799.266 kb on - strand, within MPMX20_00767at 799.303 kb on + strand, within MPMX20_00767at 799.478 kb on + strand, within MPMX20_00767at 799.532 kb on + strand, within MPMX20_00767at 799.532 kb on + strand, within MPMX20_00767at 799.553 kb on + strand, within MPMX20_00767at 799.558 kb on + strand, within MPMX20_00767at 799.558 kb on + strand, within MPMX20_00767at 799.561 kb on - strand, within MPMX20_00767at 799.566 kb on - strand, within MPMX20_00767at 799.598 kb on + strand, within MPMX20_00767at 799.697 kb on - strand, within MPMX20_00767at 799.707 kb on - strand, within MPMX20_00767at 799.730 kb on + strand, within MPMX20_00767at 799.730 kb on + strand, within MPMX20_00767at 799.731 kb on + strand, within MPMX20_00767at 799.791 kb on - strandat 799.791 kb on - strandat 799.815 kb on - strandat 799.821 kb on + strandat 799.821 kb on + strandat 799.841 kb on + strandat 799.842 kb on - strandat 799.850 kb on + strandat 799.900 kb on + strandat 799.901 kb on + strandat 799.909 kb on - strandat 799.952 kb on + strandat 799.960 kb on - strandat 799.997 kb on + strandat 800.003 kb on - strandat 800.077 kb on + strand, within MPMX20_00768at 800.079 kb on - strand, within MPMX20_00768at 800.150 kb on + strand, within MPMX20_00768at 800.158 kb on - strand, within MPMX20_00768at 800.160 kb on + strand, within MPMX20_00768at 800.160 kb on + strand, within MPMX20_00768at 800.168 kb on - strand, within MPMX20_00768at 800.168 kb on - strand, within MPMX20_00768at 800.177 kb on - strand, within MPMX20_00768at 800.189 kb on - strand, within MPMX20_00768at 800.199 kb on + strand, within MPMX20_00768at 800.212 kb on + strand, within MPMX20_00768at 800.216 kb on - strand, within MPMX20_00768at 800.253 kb on + strand, within MPMX20_00768at 800.253 kb on + strand, within MPMX20_00768at 800.253 kb on + strand, within MPMX20_00768at 800.253 kb on + strand, within MPMX20_00768at 800.253 kb on + strand, within MPMX20_00768at 800.253 kb on + strand, within MPMX20_00768at 800.258 kb on + strand, within MPMX20_00768at 800.261 kb on - strand, within MPMX20_00768at 800.261 kb on - strand, within MPMX20_00768at 800.261 kb on - strand, within MPMX20_00768at 800.261 kb on - strand, within MPMX20_00768at 800.261 kb on - strand, within MPMX20_00768at 800.261 kb on - strand, within MPMX20_00768at 800.266 kb on - strand, within MPMX20_00768at 800.270 kb on + strand, within MPMX20_00768at 800.288 kb on + strand, within MPMX20_00768at 800.332 kb on - strand, within MPMX20_00768at 800.332 kb on - strand, within MPMX20_00768at 800.342 kb on + strand, within MPMX20_00768at 800.474 kb on - strand, within MPMX20_00768at 800.497 kb on - strand, within MPMX20_00768at 800.543 kb on + strand, within MPMX20_00768at 800.551 kb on - strand, within MPMX20_00768at 800.553 kb on + strand, within MPMX20_00768at 800.558 kb on + strand, within MPMX20_00768at 800.771 kb on + strand, within MPMX20_00768at 800.779 kb on + strand, within MPMX20_00768at 800.829 kb on + strand, within MPMX20_00768at 800.862 kb on + strand, within MPMX20_00768at 800.870 kb on - strand, within MPMX20_00768at 800.870 kb on - strand, within MPMX20_00768

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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797,515 + MPMX20_00765 0.86 -1.3
797,543 + MPMX20_00765 0.88 +0.1
797,611 + -1.3
797,636 + -0.1
797,660 - +2.2
797,675 - +1.0
797,724 + +0.1
797,735 + +0.2
797,758 + -2.0
797,759 - -1.5
797,808 - -0.4
797,823 - +2.0
797,882 + +0.5
797,883 - +1.4
797,949 + MPMX20_00766 0.11 -3.1
797,949 + MPMX20_00766 0.11 -2.1
797,949 + MPMX20_00766 0.11 -3.1
797,949 + MPMX20_00766 0.11 -1.5
797,949 + MPMX20_00766 0.11 -1.0
797,949 + MPMX20_00766 0.11 -4.4
797,957 - MPMX20_00766 0.12 -0.5
797,959 + MPMX20_00766 0.12 -2.1
797,967 - MPMX20_00766 0.14 -1.0
797,967 - MPMX20_00766 0.14 -1.9
798,077 + MPMX20_00766 0.32 -4.4
798,085 - MPMX20_00766 0.33 -3.5
798,192 + MPMX20_00766 0.51 -1.9
798,220 + MPMX20_00766 0.55 -3.3
798,324 - MPMX20_00766 0.73 -3.1
798,392 - MPMX20_00766 0.84 -3.2
798,564 - -2.8
798,566 + -1.5
798,566 + -4.6
798,574 - -0.8
798,626 + -0.8
798,659 + MPMX20_00767 0.11 -2.8
798,738 - MPMX20_00767 0.17 -1.6
798,760 + MPMX20_00767 0.19 -3.8
798,760 + MPMX20_00767 0.19 -2.1
798,895 - MPMX20_00767 0.28 -3.3
798,895 - MPMX20_00767 0.28 -3.3
798,896 + MPMX20_00767 0.28 +0.1
798,922 - MPMX20_00767 0.30 -3.1
798,932 - MPMX20_00767 0.31 -1.3
798,932 - MPMX20_00767 0.31 -3.3
798,932 - MPMX20_00767 0.31 +1.2
798,937 - MPMX20_00767 0.31 -2.1
799,023 - MPMX20_00767 0.37 -0.3
799,087 - MPMX20_00767 0.42 -3.1
799,110 - MPMX20_00767 0.44 -0.8
799,130 - MPMX20_00767 0.45 -3.1
799,164 - MPMX20_00767 0.47 -1.9
799,186 - MPMX20_00767 0.49 -0.9
799,246 + MPMX20_00767 0.53 -4.0
799,246 + MPMX20_00767 0.53 -0.1
799,266 - MPMX20_00767 0.55 -2.0
799,303 + MPMX20_00767 0.57 -4.6
799,478 + MPMX20_00767 0.70 -1.3
799,532 + MPMX20_00767 0.74 -1.9
799,532 + MPMX20_00767 0.74 -1.2
799,553 + MPMX20_00767 0.75 -2.5
799,558 + MPMX20_00767 0.76 -3.2
799,558 + MPMX20_00767 0.76 -3.9
799,561 - MPMX20_00767 0.76 -2.1
799,566 - MPMX20_00767 0.76 -3.5
799,598 + MPMX20_00767 0.78 +0.2
799,697 - MPMX20_00767 0.85 -1.2
799,707 - MPMX20_00767 0.86 -2.8
799,730 + MPMX20_00767 0.88 -1.0
799,730 + MPMX20_00767 0.88 -3.2
799,731 + MPMX20_00767 0.88 -1.4
799,791 - -3.0
799,791 - -2.1
799,815 - -3.5
799,821 + -2.2
799,821 + -3.7
799,841 + -2.3
799,842 - -1.9
799,850 + -3.7
799,900 + -0.8
799,901 + -1.5
799,909 - +1.1
799,952 + -2.6
799,960 - -2.1
799,997 + -4.0
800,003 - -2.7
800,077 + MPMX20_00768 0.16 -3.5
800,079 - MPMX20_00768 0.16 -4.1
800,150 + MPMX20_00768 0.23 -3.3
800,158 - MPMX20_00768 0.23 -3.5
800,160 + MPMX20_00768 0.24 -0.6
800,160 + MPMX20_00768 0.24 -1.3
800,168 - MPMX20_00768 0.24 -2.3
800,168 - MPMX20_00768 0.24 -1.1
800,177 - MPMX20_00768 0.25 -2.7
800,189 - MPMX20_00768 0.26 -3.2
800,199 + MPMX20_00768 0.27 -3.3
800,212 + MPMX20_00768 0.28 -0.4
800,216 - MPMX20_00768 0.29 -2.3
800,253 + MPMX20_00768 0.32 +0.6
800,253 + MPMX20_00768 0.32 +0.2
800,253 + MPMX20_00768 0.32 -4.3
800,253 + MPMX20_00768 0.32 -5.2
800,253 + MPMX20_00768 0.32 -1.9
800,253 + MPMX20_00768 0.32 -3.2
800,258 + MPMX20_00768 0.33 -1.1
800,261 - MPMX20_00768 0.33 -4.8
800,261 - MPMX20_00768 0.33 -0.9
800,261 - MPMX20_00768 0.33 -2.6
800,261 - MPMX20_00768 0.33 -1.4
800,261 - MPMX20_00768 0.33 -2.2
800,261 - MPMX20_00768 0.33 -3.2
800,266 - MPMX20_00768 0.33 -4.2
800,270 + MPMX20_00768 0.34 -2.9
800,288 + MPMX20_00768 0.35 -1.1
800,332 - MPMX20_00768 0.39 -2.9
800,332 - MPMX20_00768 0.39 -3.0
800,342 + MPMX20_00768 0.40 -0.9
800,474 - MPMX20_00768 0.52 -2.4
800,497 - MPMX20_00768 0.54 -3.0
800,543 + MPMX20_00768 0.59 -4.3
800,551 - MPMX20_00768 0.59 -3.1
800,553 + MPMX20_00768 0.60 -4.5
800,558 + MPMX20_00768 0.60 -1.3
800,771 + MPMX20_00768 0.79 -3.2
800,779 + MPMX20_00768 0.80 -0.1
800,829 + MPMX20_00768 0.85 +0.2
800,862 + MPMX20_00768 0.88 -1.3
800,870 - MPMX20_00768 0.89 -2.0
800,870 - MPMX20_00768 0.89 -3.3

Or see this region's nucleotide sequence