Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00766

Experiment: D,L-Malic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00765 and MPMX20_00766 are separated by 201 nucleotidesMPMX20_00766 and MPMX20_00767 are separated by 10 nucleotides MPMX20_00765: MPMX20_00765 - Sugar efflux transporter A, at 796,504 to 797,682 _00765 MPMX20_00766: MPMX20_00766 - 3-isopropylmalate dehydratase small subunit 1, at 797,884 to 798,489 _00766 MPMX20_00767: MPMX20_00767 - 3-isopropylmalate dehydratase large subunit 1, at 798,500 to 799,900 _00767 Position (kb) 797 798 799Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 796.962 kb on - strand, within MPMX20_00765at 796.967 kb on - strand, within MPMX20_00765at 796.978 kb on + strand, within MPMX20_00765at 796.985 kb on + strand, within MPMX20_00765at 796.996 kb on + strand, within MPMX20_00765at 797.054 kb on + strand, within MPMX20_00765at 797.054 kb on + strand, within MPMX20_00765at 797.062 kb on - strand, within MPMX20_00765at 797.062 kb on - strand, within MPMX20_00765at 797.062 kb on - strand, within MPMX20_00765at 797.062 kb on - strand, within MPMX20_00765at 797.074 kb on + strand, within MPMX20_00765at 797.074 kb on + strand, within MPMX20_00765at 797.079 kb on + strand, within MPMX20_00765at 797.081 kb on + strand, within MPMX20_00765at 797.082 kb on - strand, within MPMX20_00765at 797.087 kb on - strand, within MPMX20_00765at 797.087 kb on - strand, within MPMX20_00765at 797.110 kb on + strand, within MPMX20_00765at 797.116 kb on - strand, within MPMX20_00765at 797.117 kb on - strand, within MPMX20_00765at 797.120 kb on + strand, within MPMX20_00765at 797.122 kb on + strand, within MPMX20_00765at 797.130 kb on - strand, within MPMX20_00765at 797.130 kb on - strand, within MPMX20_00765at 797.236 kb on + strand, within MPMX20_00765at 797.255 kb on + strand, within MPMX20_00765at 797.276 kb on - strand, within MPMX20_00765at 797.439 kb on + strand, within MPMX20_00765at 797.447 kb on - strand, within MPMX20_00765at 797.447 kb on - strand, within MPMX20_00765at 797.471 kb on + strand, within MPMX20_00765at 797.479 kb on - strand, within MPMX20_00765at 797.479 kb on - strand, within MPMX20_00765at 797.515 kb on + strand, within MPMX20_00765at 797.543 kb on + strand, within MPMX20_00765at 797.611 kb on + strandat 797.636 kb on + strandat 797.660 kb on - strandat 797.675 kb on - strandat 797.724 kb on + strandat 797.735 kb on + strandat 797.758 kb on + strandat 797.759 kb on - strandat 797.808 kb on - strandat 797.823 kb on - strandat 797.882 kb on + strandat 797.883 kb on - strandat 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.949 kb on + strand, within MPMX20_00766at 797.957 kb on - strand, within MPMX20_00766at 797.959 kb on + strand, within MPMX20_00766at 797.967 kb on - strand, within MPMX20_00766at 797.967 kb on - strand, within MPMX20_00766at 798.077 kb on + strand, within MPMX20_00766at 798.085 kb on - strand, within MPMX20_00766at 798.192 kb on + strand, within MPMX20_00766at 798.220 kb on + strand, within MPMX20_00766at 798.324 kb on - strand, within MPMX20_00766at 798.392 kb on - strand, within MPMX20_00766at 798.564 kb on - strandat 798.566 kb on + strandat 798.566 kb on + strandat 798.574 kb on - strandat 798.626 kb on + strandat 798.659 kb on + strand, within MPMX20_00767at 798.738 kb on - strand, within MPMX20_00767at 798.760 kb on + strand, within MPMX20_00767at 798.760 kb on + strand, within MPMX20_00767at 798.895 kb on - strand, within MPMX20_00767at 798.895 kb on - strand, within MPMX20_00767at 798.896 kb on + strand, within MPMX20_00767at 798.922 kb on - strand, within MPMX20_00767at 798.932 kb on - strand, within MPMX20_00767at 798.932 kb on - strand, within MPMX20_00767at 798.932 kb on - strand, within MPMX20_00767at 798.937 kb on - strand, within MPMX20_00767at 799.023 kb on - strand, within MPMX20_00767at 799.087 kb on - strand, within MPMX20_00767at 799.110 kb on - strand, within MPMX20_00767at 799.130 kb on - strand, within MPMX20_00767at 799.164 kb on - strand, within MPMX20_00767at 799.186 kb on - strand, within MPMX20_00767at 799.246 kb on + strand, within MPMX20_00767at 799.246 kb on + strand, within MPMX20_00767at 799.266 kb on - strand, within MPMX20_00767at 799.303 kb on + strand, within MPMX20_00767at 799.478 kb on + strand, within MPMX20_00767

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Malic Acid (C)
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796,962 - MPMX20_00765 0.39 +0.7
796,967 - MPMX20_00765 0.39 +0.8
796,978 + MPMX20_00765 0.40 +1.8
796,985 + MPMX20_00765 0.41 +0.3
796,996 + MPMX20_00765 0.42 +1.1
797,054 + MPMX20_00765 0.47 +2.2
797,054 + MPMX20_00765 0.47 -0.5
797,062 - MPMX20_00765 0.47 -0.2
797,062 - MPMX20_00765 0.47 +0.1
797,062 - MPMX20_00765 0.47 -0.2
797,062 - MPMX20_00765 0.47 +1.6
797,074 + MPMX20_00765 0.48 +1.0
797,074 + MPMX20_00765 0.48 +0.4
797,079 + MPMX20_00765 0.49 +1.2
797,081 + MPMX20_00765 0.49 -1.3
797,082 - MPMX20_00765 0.49 +0.3
797,087 - MPMX20_00765 0.49 +0.7
797,087 - MPMX20_00765 0.49 -0.3
797,110 + MPMX20_00765 0.51 -0.2
797,116 - MPMX20_00765 0.52 -1.6
797,117 - MPMX20_00765 0.52 -0.5
797,120 + MPMX20_00765 0.52 +0.1
797,122 + MPMX20_00765 0.52 -1.0
797,130 - MPMX20_00765 0.53 +0.1
797,130 - MPMX20_00765 0.53 +2.0
797,236 + MPMX20_00765 0.62 +0.4
797,255 + MPMX20_00765 0.64 +0.1
797,276 - MPMX20_00765 0.65 -0.9
797,439 + MPMX20_00765 0.79 +0.1
797,447 - MPMX20_00765 0.80 -0.9
797,447 - MPMX20_00765 0.80 +3.3
797,471 + MPMX20_00765 0.82 -0.1
797,479 - MPMX20_00765 0.83 +1.0
797,479 - MPMX20_00765 0.83 +0.4
797,515 + MPMX20_00765 0.86 -1.3
797,543 + MPMX20_00765 0.88 +0.1
797,611 + -1.3
797,636 + -0.1
797,660 - +2.2
797,675 - +1.0
797,724 + +0.1
797,735 + +0.2
797,758 + -2.0
797,759 - -1.5
797,808 - -0.4
797,823 - +2.0
797,882 + +0.5
797,883 - +1.4
797,949 + MPMX20_00766 0.11 -3.1
797,949 + MPMX20_00766 0.11 -2.1
797,949 + MPMX20_00766 0.11 -3.1
797,949 + MPMX20_00766 0.11 -1.5
797,949 + MPMX20_00766 0.11 -1.0
797,949 + MPMX20_00766 0.11 -4.4
797,957 - MPMX20_00766 0.12 -0.5
797,959 + MPMX20_00766 0.12 -2.1
797,967 - MPMX20_00766 0.14 -1.0
797,967 - MPMX20_00766 0.14 -1.9
798,077 + MPMX20_00766 0.32 -4.4
798,085 - MPMX20_00766 0.33 -3.5
798,192 + MPMX20_00766 0.51 -1.9
798,220 + MPMX20_00766 0.55 -3.3
798,324 - MPMX20_00766 0.73 -3.1
798,392 - MPMX20_00766 0.84 -3.2
798,564 - -2.8
798,566 + -1.5
798,566 + -4.6
798,574 - -0.8
798,626 + -0.8
798,659 + MPMX20_00767 0.11 -2.8
798,738 - MPMX20_00767 0.17 -1.6
798,760 + MPMX20_00767 0.19 -3.8
798,760 + MPMX20_00767 0.19 -2.1
798,895 - MPMX20_00767 0.28 -3.3
798,895 - MPMX20_00767 0.28 -3.3
798,896 + MPMX20_00767 0.28 +0.1
798,922 - MPMX20_00767 0.30 -3.1
798,932 - MPMX20_00767 0.31 -1.3
798,932 - MPMX20_00767 0.31 -3.3
798,932 - MPMX20_00767 0.31 +1.2
798,937 - MPMX20_00767 0.31 -2.1
799,023 - MPMX20_00767 0.37 -0.3
799,087 - MPMX20_00767 0.42 -3.1
799,110 - MPMX20_00767 0.44 -0.8
799,130 - MPMX20_00767 0.45 -3.1
799,164 - MPMX20_00767 0.47 -1.9
799,186 - MPMX20_00767 0.49 -0.9
799,246 + MPMX20_00767 0.53 -4.0
799,246 + MPMX20_00767 0.53 -0.1
799,266 - MPMX20_00767 0.55 -2.0
799,303 + MPMX20_00767 0.57 -4.6
799,478 + MPMX20_00767 0.70 -1.3

Or see this region's nucleotide sequence