Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00440 and MPMX20_00441 are separated by 19 nucleotides MPMX20_00441 and MPMX20_00442 are separated by 97 nucleotides
MPMX20_00440: MPMX20_00440 - Miniconductance mechanosensitive channel MscM, at 453,870 to 457,193
_00440
MPMX20_00441: MPMX20_00441 - Phosphatidylserine decarboxylase proenzyme, at 457,213 to 458,181
_00441
MPMX20_00442: MPMX20_00442 - Small ribosomal subunit biogenesis GTPase RsgA, at 458,279 to 459,331
_00442
Position (kb) 457
458
459 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 456.215 kb on + strand, within MPMX20_00440 at 456.217 kb on + strand, within MPMX20_00440 at 456.217 kb on + strand, within MPMX20_00440 at 456.217 kb on + strand, within MPMX20_00440 at 456.217 kb on + strand, within MPMX20_00440 at 456.217 kb on + strand, within MPMX20_00440 at 456.225 kb on - strand, within MPMX20_00440 at 456.225 kb on - strand, within MPMX20_00440 at 456.260 kb on + strand, within MPMX20_00440 at 456.268 kb on - strand, within MPMX20_00440 at 456.268 kb on - strand, within MPMX20_00440 at 456.336 kb on - strand, within MPMX20_00440 at 456.346 kb on - strand, within MPMX20_00440 at 456.346 kb on - strand, within MPMX20_00440 at 456.375 kb on + strand, within MPMX20_00440 at 456.392 kb on + strand, within MPMX20_00440 at 456.403 kb on + strand, within MPMX20_00440 at 456.403 kb on + strand, within MPMX20_00440 at 456.411 kb on + strand, within MPMX20_00440 at 456.411 kb on - strand, within MPMX20_00440 at 456.411 kb on - strand, within MPMX20_00440 at 456.411 kb on - strand, within MPMX20_00440 at 456.411 kb on - strand, within MPMX20_00440 at 456.434 kb on + strand, within MPMX20_00440 at 456.453 kb on - strand, within MPMX20_00440 at 456.502 kb on + strand, within MPMX20_00440 at 456.523 kb on + strand, within MPMX20_00440 at 456.545 kb on - strand, within MPMX20_00440 at 456.648 kb on - strand, within MPMX20_00440 at 456.731 kb on - strand, within MPMX20_00440 at 456.807 kb on + strand, within MPMX20_00440 at 456.815 kb on - strand, within MPMX20_00440 at 456.881 kb on + strand at 456.914 kb on + strand at 456.936 kb on - strand at 456.936 kb on - strand at 457.001 kb on + strand at 457.052 kb on + strand at 457.052 kb on + strand at 457.052 kb on + strand at 457.052 kb on + strand at 457.060 kb on - strand at 457.068 kb on - strand at 457.145 kb on + strand at 457.153 kb on - strand at 457.153 kb on - strand at 457.279 kb on + strand at 457.315 kb on + strand, within MPMX20_00441 at 457.323 kb on - strand, within MPMX20_00441 at 458.195 kb on - strand at 458.265 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 456,215 + MPMX20_00440 0.71 +1.7 456,217 + MPMX20_00440 0.71 -1.2 456,217 + MPMX20_00440 0.71 +1.6 456,217 + MPMX20_00440 0.71 +0.7 456,217 + MPMX20_00440 0.71 +1.0 456,217 + MPMX20_00440 0.71 -0.2 456,225 - MPMX20_00440 0.71 +2.5 456,225 - MPMX20_00440 0.71 +0.8 456,260 + MPMX20_00440 0.72 +0.2 456,268 - MPMX20_00440 0.72 -1.7 456,268 - MPMX20_00440 0.72 +1.0 456,336 - MPMX20_00440 0.74 +2.5 456,346 - MPMX20_00440 0.74 +1.3 456,346 - MPMX20_00440 0.74 -0.0 456,375 + MPMX20_00440 0.75 -0.0 456,392 + MPMX20_00440 0.76 -0.8 456,403 + MPMX20_00440 0.76 -3.6 456,403 + MPMX20_00440 0.76 -0.8 456,411 + MPMX20_00440 0.76 +0.1 456,411 - MPMX20_00440 0.76 -1.7 456,411 - MPMX20_00440 0.76 +3.0 456,411 - MPMX20_00440 0.76 -1.1 456,411 - MPMX20_00440 0.76 +1.7 456,434 + MPMX20_00440 0.77 -1.8 456,453 - MPMX20_00440 0.78 -2.4 456,502 + MPMX20_00440 0.79 -0.7 456,523 + MPMX20_00440 0.80 +0.5 456,545 - MPMX20_00440 0.80 +0.3 456,648 - MPMX20_00440 0.84 -0.4 456,731 - MPMX20_00440 0.86 -0.9 456,807 + MPMX20_00440 0.88 -0.5 456,815 - MPMX20_00440 0.89 -2.9 456,881 + -1.1 456,914 + -3.7 456,936 - -0.2 456,936 - -0.7 457,001 + +0.6 457,052 + +0.8 457,052 + +1.4 457,052 + +0.7 457,052 + +0.1 457,060 - +1.2 457,068 - -2.7 457,145 + +1.2 457,153 - -0.3 457,153 - -0.6 457,279 + -2.7 457,315 + MPMX20_00441 0.11 +0.0 457,323 - MPMX20_00441 0.11 -3.3 458,195 - +0.8 458,265 + +0.8
Or see this region's nucleotide sequence