Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03589 and MPMX20_03590 are separated by 61 nucleotides MPMX20_03590 and MPMX20_03591 are separated by 63 nucleotides MPMX20_03591 and MPMX20_03592 overlap by 8 nucleotides MPMX20_03592 and MPMX20_03593 overlap by 4 nucleotides
MPMX20_03589: MPMX20_03589 - Sorbitol-6-phosphate 2-dehydrogenase, at 3,777,902 to 3,778,681
_03589
MPMX20_03590: MPMX20_03590 - hypothetical protein, at 3,778,743 to 3,779,102
_03590
MPMX20_03591: MPMX20_03591 - Glucitol operon repressor, at 3,779,166 to 3,779,939
_03591
MPMX20_03592: MPMX20_03592 - Arabinose 5-phosphate isomerase GutQ, at 3,779,932 to 3,780,897
_03592
MPMX20_03593: MPMX20_03593 - Anaerobic nitric oxide reductase transcription regulator NorR, at 3,780,894 to 3,782,408
_03593
Position (kb)
3779
3780 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 3778.169 kb on + strand, within MPMX20_03589 at 3778.172 kb on - strand, within MPMX20_03589 at 3778.205 kb on - strand, within MPMX20_03589 at 3778.231 kb on + strand, within MPMX20_03589 at 3778.231 kb on + strand, within MPMX20_03589 at 3778.361 kb on - strand, within MPMX20_03589 at 3778.361 kb on - strand, within MPMX20_03589 at 3778.383 kb on + strand, within MPMX20_03589 at 3778.391 kb on - strand, within MPMX20_03589 at 3778.535 kb on + strand, within MPMX20_03589 at 3778.540 kb on + strand, within MPMX20_03589 at 3778.548 kb on - strand, within MPMX20_03589 at 3778.548 kb on - strand, within MPMX20_03589 at 3778.635 kb on + strand at 3778.635 kb on + strand at 3778.655 kb on - strand at 3778.662 kb on + strand at 3778.683 kb on - strand at 3778.852 kb on - strand, within MPMX20_03590 at 3778.852 kb on - strand, within MPMX20_03590 at 3778.917 kb on - strand, within MPMX20_03590 at 3778.968 kb on - strand, within MPMX20_03590 at 3779.057 kb on - strand, within MPMX20_03590 at 3779.067 kb on - strand at 3779.265 kb on - strand, within MPMX20_03591 at 3779.329 kb on + strand, within MPMX20_03591 at 3779.337 kb on - strand, within MPMX20_03591 at 3779.381 kb on + strand, within MPMX20_03591 at 3779.389 kb on - strand, within MPMX20_03591 at 3779.389 kb on - strand, within MPMX20_03591 at 3779.446 kb on + strand, within MPMX20_03591 at 3779.470 kb on - strand, within MPMX20_03591 at 3779.470 kb on - strand, within MPMX20_03591 at 3779.558 kb on + strand, within MPMX20_03591 at 3779.558 kb on - strand, within MPMX20_03591 at 3779.670 kb on + strand, within MPMX20_03591 at 3779.678 kb on - strand, within MPMX20_03591 at 3779.687 kb on - strand, within MPMX20_03591 at 3779.689 kb on + strand, within MPMX20_03591 at 3779.735 kb on - strand, within MPMX20_03591 at 3779.750 kb on + strand, within MPMX20_03591 at 3779.758 kb on - strand, within MPMX20_03591 at 3779.758 kb on - strand, within MPMX20_03591 at 3779.820 kb on + strand, within MPMX20_03591 at 3779.854 kb on - strand, within MPMX20_03591 at 3779.854 kb on - strand, within MPMX20_03591 at 3779.854 kb on - strand, within MPMX20_03591 at 3779.870 kb on - strand at 3779.968 kb on - strand at 3780.041 kb on + strand, within MPMX20_03592 at 3780.041 kb on + strand, within MPMX20_03592 at 3780.041 kb on + strand, within MPMX20_03592 at 3780.041 kb on + strand, within MPMX20_03592 at 3780.049 kb on - strand, within MPMX20_03592 at 3780.049 kb on - strand, within MPMX20_03592 at 3780.333 kb on - strand, within MPMX20_03592 at 3780.399 kb on - strand, within MPMX20_03592 at 3780.514 kb on - strand, within MPMX20_03592 at 3780.545 kb on - strand, within MPMX20_03592 at 3780.571 kb on + strand, within MPMX20_03592 at 3780.572 kb on - strand, within MPMX20_03592 at 3780.572 kb on - strand, within MPMX20_03592 at 3780.601 kb on + strand, within MPMX20_03592 at 3780.654 kb on + strand, within MPMX20_03592 at 3780.662 kb on - strand, within MPMX20_03592 at 3780.662 kb on - strand, within MPMX20_03592 at 3780.674 kb on + strand, within MPMX20_03592 at 3780.725 kb on - strand, within MPMX20_03592 at 3780.784 kb on + strand, within MPMX20_03592 at 3780.790 kb on - strand, within MPMX20_03592 at 3780.793 kb on - strand, within MPMX20_03592 at 3780.864 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 3,778,169 + MPMX20_03589 0.34 -1.6 3,778,172 - MPMX20_03589 0.35 -2.1 3,778,205 - MPMX20_03589 0.39 -1.0 3,778,231 + MPMX20_03589 0.42 -2.2 3,778,231 + MPMX20_03589 0.42 -5.0 3,778,361 - MPMX20_03589 0.59 -1.7 3,778,361 - MPMX20_03589 0.59 -1.6 3,778,383 + MPMX20_03589 0.62 -0.9 3,778,391 - MPMX20_03589 0.63 -3.4 3,778,535 + MPMX20_03589 0.81 -1.9 3,778,540 + MPMX20_03589 0.82 -3.3 3,778,548 - MPMX20_03589 0.83 -4.7 3,778,548 - MPMX20_03589 0.83 -0.7 3,778,635 + -4.8 3,778,635 + -2.4 3,778,655 - -4.2 3,778,662 + -2.4 3,778,683 - -0.3 3,778,852 - MPMX20_03590 0.30 -1.3 3,778,852 - MPMX20_03590 0.30 -1.3 3,778,917 - MPMX20_03590 0.48 +1.7 3,778,968 - MPMX20_03590 0.62 -0.5 3,779,057 - MPMX20_03590 0.87 -0.1 3,779,067 - -0.6 3,779,265 - MPMX20_03591 0.13 -0.5 3,779,329 + MPMX20_03591 0.21 +0.9 3,779,337 - MPMX20_03591 0.22 +3.5 3,779,381 + MPMX20_03591 0.28 +0.6 3,779,389 - MPMX20_03591 0.29 -0.8 3,779,389 - MPMX20_03591 0.29 -0.3 3,779,446 + MPMX20_03591 0.36 +0.0 3,779,470 - MPMX20_03591 0.39 -1.1 3,779,470 - MPMX20_03591 0.39 +0.4 3,779,558 + MPMX20_03591 0.51 -1.1 3,779,558 - MPMX20_03591 0.51 -0.1 3,779,670 + MPMX20_03591 0.65 +0.2 3,779,678 - MPMX20_03591 0.66 +0.5 3,779,687 - MPMX20_03591 0.67 +0.9 3,779,689 + MPMX20_03591 0.68 +0.3 3,779,735 - MPMX20_03591 0.74 +0.8 3,779,750 + MPMX20_03591 0.75 -0.1 3,779,758 - MPMX20_03591 0.76 +0.6 3,779,758 - MPMX20_03591 0.76 +0.0 3,779,820 + MPMX20_03591 0.84 +0.4 3,779,854 - MPMX20_03591 0.89 +0.1 3,779,854 - MPMX20_03591 0.89 +0.3 3,779,854 - MPMX20_03591 0.89 +0.2 3,779,870 - +0.5 3,779,968 - -1.3 3,780,041 + MPMX20_03592 0.11 +0.2 3,780,041 + MPMX20_03592 0.11 +0.3 3,780,041 + MPMX20_03592 0.11 -0.4 3,780,041 + MPMX20_03592 0.11 -0.1 3,780,049 - MPMX20_03592 0.12 +1.9 3,780,049 - MPMX20_03592 0.12 +0.0 3,780,333 - MPMX20_03592 0.42 +1.9 3,780,399 - MPMX20_03592 0.48 -0.5 3,780,514 - MPMX20_03592 0.60 +0.5 3,780,545 - MPMX20_03592 0.63 -0.0 3,780,571 + MPMX20_03592 0.66 +1.0 3,780,572 - MPMX20_03592 0.66 -0.7 3,780,572 - MPMX20_03592 0.66 -2.4 3,780,601 + MPMX20_03592 0.69 +0.5 3,780,654 + MPMX20_03592 0.75 -0.6 3,780,662 - MPMX20_03592 0.76 +1.3 3,780,662 - MPMX20_03592 0.76 +0.9 3,780,674 + MPMX20_03592 0.77 +1.5 3,780,725 - MPMX20_03592 0.82 -0.5 3,780,784 + MPMX20_03592 0.88 -1.4 3,780,790 - MPMX20_03592 0.89 -0.8 3,780,793 - MPMX20_03592 0.89 +0.1 3,780,864 + -1.2
Or see this region's nucleotide sequence