Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03591

Experiment: D-Sorbitol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03589 and MPMX20_03590 are separated by 61 nucleotidesMPMX20_03590 and MPMX20_03591 are separated by 63 nucleotidesMPMX20_03591 and MPMX20_03592 overlap by 8 nucleotidesMPMX20_03592 and MPMX20_03593 overlap by 4 nucleotides MPMX20_03589: MPMX20_03589 - Sorbitol-6-phosphate 2-dehydrogenase, at 3,777,902 to 3,778,681 _03589 MPMX20_03590: MPMX20_03590 - hypothetical protein, at 3,778,743 to 3,779,102 _03590 MPMX20_03591: MPMX20_03591 - Glucitol operon repressor, at 3,779,166 to 3,779,939 _03591 MPMX20_03592: MPMX20_03592 - Arabinose 5-phosphate isomerase GutQ, at 3,779,932 to 3,780,897 _03592 MPMX20_03593: MPMX20_03593 - Anaerobic nitric oxide reductase transcription regulator NorR, at 3,780,894 to 3,782,408 _03593 Position (kb) 3779 3780Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 3778.169 kb on + strand, within MPMX20_03589at 3778.172 kb on - strand, within MPMX20_03589at 3778.205 kb on - strand, within MPMX20_03589at 3778.231 kb on + strand, within MPMX20_03589at 3778.231 kb on + strand, within MPMX20_03589at 3778.361 kb on - strand, within MPMX20_03589at 3778.361 kb on - strand, within MPMX20_03589at 3778.383 kb on + strand, within MPMX20_03589at 3778.391 kb on - strand, within MPMX20_03589at 3778.535 kb on + strand, within MPMX20_03589at 3778.540 kb on + strand, within MPMX20_03589at 3778.548 kb on - strand, within MPMX20_03589at 3778.548 kb on - strand, within MPMX20_03589at 3778.635 kb on + strandat 3778.635 kb on + strandat 3778.655 kb on - strandat 3778.662 kb on + strandat 3778.683 kb on - strandat 3778.852 kb on - strand, within MPMX20_03590at 3778.852 kb on - strand, within MPMX20_03590at 3778.917 kb on - strand, within MPMX20_03590at 3778.968 kb on - strand, within MPMX20_03590at 3779.057 kb on - strand, within MPMX20_03590at 3779.067 kb on - strandat 3779.265 kb on - strand, within MPMX20_03591at 3779.329 kb on + strand, within MPMX20_03591at 3779.337 kb on - strand, within MPMX20_03591at 3779.381 kb on + strand, within MPMX20_03591at 3779.389 kb on - strand, within MPMX20_03591at 3779.389 kb on - strand, within MPMX20_03591at 3779.446 kb on + strand, within MPMX20_03591at 3779.470 kb on - strand, within MPMX20_03591at 3779.470 kb on - strand, within MPMX20_03591at 3779.558 kb on + strand, within MPMX20_03591at 3779.558 kb on - strand, within MPMX20_03591at 3779.670 kb on + strand, within MPMX20_03591at 3779.678 kb on - strand, within MPMX20_03591at 3779.687 kb on - strand, within MPMX20_03591at 3779.689 kb on + strand, within MPMX20_03591at 3779.735 kb on - strand, within MPMX20_03591at 3779.750 kb on + strand, within MPMX20_03591at 3779.758 kb on - strand, within MPMX20_03591at 3779.758 kb on - strand, within MPMX20_03591at 3779.820 kb on + strand, within MPMX20_03591at 3779.854 kb on - strand, within MPMX20_03591at 3779.854 kb on - strand, within MPMX20_03591at 3779.854 kb on - strand, within MPMX20_03591at 3779.870 kb on - strandat 3779.968 kb on - strandat 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.041 kb on + strand, within MPMX20_03592at 3780.049 kb on - strand, within MPMX20_03592at 3780.049 kb on - strand, within MPMX20_03592at 3780.333 kb on - strand, within MPMX20_03592at 3780.399 kb on - strand, within MPMX20_03592at 3780.514 kb on - strand, within MPMX20_03592at 3780.545 kb on - strand, within MPMX20_03592at 3780.571 kb on + strand, within MPMX20_03592at 3780.572 kb on - strand, within MPMX20_03592at 3780.572 kb on - strand, within MPMX20_03592at 3780.601 kb on + strand, within MPMX20_03592at 3780.654 kb on + strand, within MPMX20_03592at 3780.662 kb on - strand, within MPMX20_03592at 3780.662 kb on - strand, within MPMX20_03592at 3780.674 kb on + strand, within MPMX20_03592at 3780.725 kb on - strand, within MPMX20_03592at 3780.784 kb on + strand, within MPMX20_03592at 3780.790 kb on - strand, within MPMX20_03592at 3780.793 kb on - strand, within MPMX20_03592at 3780.864 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Sorbitol (C)
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3,778,169 + MPMX20_03589 0.34 -1.6
3,778,172 - MPMX20_03589 0.35 -2.1
3,778,205 - MPMX20_03589 0.39 -1.0
3,778,231 + MPMX20_03589 0.42 -2.2
3,778,231 + MPMX20_03589 0.42 -5.0
3,778,361 - MPMX20_03589 0.59 -1.7
3,778,361 - MPMX20_03589 0.59 -1.6
3,778,383 + MPMX20_03589 0.62 -0.9
3,778,391 - MPMX20_03589 0.63 -3.4
3,778,535 + MPMX20_03589 0.81 -1.9
3,778,540 + MPMX20_03589 0.82 -3.3
3,778,548 - MPMX20_03589 0.83 -4.7
3,778,548 - MPMX20_03589 0.83 -0.7
3,778,635 + -4.8
3,778,635 + -2.4
3,778,655 - -4.2
3,778,662 + -2.4
3,778,683 - -0.3
3,778,852 - MPMX20_03590 0.30 -1.3
3,778,852 - MPMX20_03590 0.30 -1.3
3,778,917 - MPMX20_03590 0.48 +1.7
3,778,968 - MPMX20_03590 0.62 -0.5
3,779,057 - MPMX20_03590 0.87 -0.1
3,779,067 - -0.6
3,779,265 - MPMX20_03591 0.13 -0.5
3,779,329 + MPMX20_03591 0.21 +0.9
3,779,337 - MPMX20_03591 0.22 +3.5
3,779,381 + MPMX20_03591 0.28 +0.6
3,779,389 - MPMX20_03591 0.29 -0.8
3,779,389 - MPMX20_03591 0.29 -0.3
3,779,446 + MPMX20_03591 0.36 +0.0
3,779,470 - MPMX20_03591 0.39 -1.1
3,779,470 - MPMX20_03591 0.39 +0.4
3,779,558 + MPMX20_03591 0.51 -1.1
3,779,558 - MPMX20_03591 0.51 -0.1
3,779,670 + MPMX20_03591 0.65 +0.2
3,779,678 - MPMX20_03591 0.66 +0.5
3,779,687 - MPMX20_03591 0.67 +0.9
3,779,689 + MPMX20_03591 0.68 +0.3
3,779,735 - MPMX20_03591 0.74 +0.8
3,779,750 + MPMX20_03591 0.75 -0.1
3,779,758 - MPMX20_03591 0.76 +0.6
3,779,758 - MPMX20_03591 0.76 +0.0
3,779,820 + MPMX20_03591 0.84 +0.4
3,779,854 - MPMX20_03591 0.89 +0.1
3,779,854 - MPMX20_03591 0.89 +0.3
3,779,854 - MPMX20_03591 0.89 +0.2
3,779,870 - +0.5
3,779,968 - -1.3
3,780,041 + MPMX20_03592 0.11 +0.2
3,780,041 + MPMX20_03592 0.11 +0.3
3,780,041 + MPMX20_03592 0.11 -0.4
3,780,041 + MPMX20_03592 0.11 -0.1
3,780,049 - MPMX20_03592 0.12 +1.9
3,780,049 - MPMX20_03592 0.12 +0.0
3,780,333 - MPMX20_03592 0.42 +1.9
3,780,399 - MPMX20_03592 0.48 -0.5
3,780,514 - MPMX20_03592 0.60 +0.5
3,780,545 - MPMX20_03592 0.63 -0.0
3,780,571 + MPMX20_03592 0.66 +1.0
3,780,572 - MPMX20_03592 0.66 -0.7
3,780,572 - MPMX20_03592 0.66 -2.4
3,780,601 + MPMX20_03592 0.69 +0.5
3,780,654 + MPMX20_03592 0.75 -0.6
3,780,662 - MPMX20_03592 0.76 +1.3
3,780,662 - MPMX20_03592 0.76 +0.9
3,780,674 + MPMX20_03592 0.77 +1.5
3,780,725 - MPMX20_03592 0.82 -0.5
3,780,784 + MPMX20_03592 0.88 -1.4
3,780,790 - MPMX20_03592 0.89 -0.8
3,780,793 - MPMX20_03592 0.89 +0.1
3,780,864 + -1.2

Or see this region's nucleotide sequence