Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03310 and MPMX20_03311 are separated by 40 nucleotides MPMX20_03311 and MPMX20_03312 are separated by 44 nucleotides MPMX20_03312 and MPMX20_03313 are separated by 5 nucleotides
MPMX20_03310: MPMX20_03310 - Phosphoenolpyruvate-protein phosphotransferase, at 3,478,755 to 3,480,482
_03310
MPMX20_03311: MPMX20_03311 - PTS system glucose-specific EIIA component, at 3,480,523 to 3,481,032
_03311
MPMX20_03312: MPMX20_03312 - Pyridoxine/pyridoxal/pyridoxamine kinase, at 3,481,077 to 3,481,913
_03312
MPMX20_03313: MPMX20_03313 - Cysteine synthase B, at 3,481,919 to 3,482,830
_03313
Position (kb)
3481
3482 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3480.126 kb on + strand, within MPMX20_03310 at 3480.133 kb on + strand, within MPMX20_03310 at 3480.133 kb on + strand, within MPMX20_03310 at 3480.392 kb on + strand at 3480.392 kb on + strand at 3480.392 kb on + strand at 3481.088 kb on + strand at 3481.088 kb on + strand at 3481.096 kb on - strand at 3481.096 kb on - strand at 3481.113 kb on - strand at 3481.202 kb on + strand, within MPMX20_03312 at 3481.202 kb on + strand, within MPMX20_03312 at 3481.215 kb on - strand, within MPMX20_03312 at 3481.256 kb on + strand, within MPMX20_03312 at 3481.263 kb on + strand, within MPMX20_03312 at 3481.265 kb on + strand, within MPMX20_03312 at 3481.332 kb on + strand, within MPMX20_03312 at 3481.332 kb on + strand, within MPMX20_03312 at 3481.332 kb on + strand, within MPMX20_03312 at 3481.376 kb on - strand, within MPMX20_03312 at 3481.417 kb on - strand, within MPMX20_03312 at 3481.447 kb on - strand, within MPMX20_03312 at 3481.559 kb on + strand, within MPMX20_03312 at 3481.559 kb on + strand, within MPMX20_03312 at 3481.567 kb on - strand, within MPMX20_03312 at 3481.567 kb on - strand, within MPMX20_03312 at 3481.613 kb on + strand, within MPMX20_03312 at 3481.653 kb on - strand, within MPMX20_03312 at 3481.663 kb on + strand, within MPMX20_03312 at 3481.673 kb on + strand, within MPMX20_03312 at 3481.682 kb on + strand, within MPMX20_03312 at 3481.758 kb on - strand, within MPMX20_03312 at 3481.833 kb on + strand at 3481.833 kb on + strand at 3481.880 kb on + strand at 3481.887 kb on - strand at 3481.938 kb on + strand at 3481.938 kb on + strand at 3481.944 kb on - strand at 3481.944 kb on - strand at 3481.946 kb on - strand at 3481.954 kb on - strand at 3482.051 kb on - strand, within MPMX20_03313 at 3482.823 kb on - strand at 3482.823 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 3,480,126 + MPMX20_03310 0.79 -2.2 3,480,133 + MPMX20_03310 0.80 -2.8 3,480,133 + MPMX20_03310 0.80 -2.3 3,480,392 + -1.6 3,480,392 + -1.9 3,480,392 + -2.1 3,481,088 + -0.3 3,481,088 + -0.1 3,481,096 - +0.0 3,481,096 - -2.2 3,481,113 - -0.6 3,481,202 + MPMX20_03312 0.15 -1.3 3,481,202 + MPMX20_03312 0.15 +0.8 3,481,215 - MPMX20_03312 0.16 +1.3 3,481,256 + MPMX20_03312 0.21 -0.0 3,481,263 + MPMX20_03312 0.22 +1.7 3,481,265 + MPMX20_03312 0.22 -0.8 3,481,332 + MPMX20_03312 0.30 +0.4 3,481,332 + MPMX20_03312 0.30 -0.1 3,481,332 + MPMX20_03312 0.30 +0.4 3,481,376 - MPMX20_03312 0.36 +0.5 3,481,417 - MPMX20_03312 0.41 -0.6 3,481,447 - MPMX20_03312 0.44 -0.5 3,481,559 + MPMX20_03312 0.58 +0.8 3,481,559 + MPMX20_03312 0.58 -0.5 3,481,567 - MPMX20_03312 0.59 -0.0 3,481,567 - MPMX20_03312 0.59 +0.6 3,481,613 + MPMX20_03312 0.64 -0.7 3,481,653 - MPMX20_03312 0.69 +0.3 3,481,663 + MPMX20_03312 0.70 +0.4 3,481,673 + MPMX20_03312 0.71 -0.3 3,481,682 + MPMX20_03312 0.72 +0.1 3,481,758 - MPMX20_03312 0.81 -0.5 3,481,833 + -1.1 3,481,833 + +0.6 3,481,880 + +0.0 3,481,887 - -0.5 3,481,938 + +1.4 3,481,938 + -0.2 3,481,944 - -0.8 3,481,944 - +1.0 3,481,946 - +0.6 3,481,954 - -1.1 3,482,051 - MPMX20_03313 0.14 +0.1 3,482,823 - -0.3 3,482,823 - +1.1
Or see this region's nucleotide sequence