Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03984

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03982 and MPMX20_03983 are separated by 33 nucleotidesMPMX20_03983 and MPMX20_03984 are separated by 42 nucleotidesMPMX20_03984 and MPMX20_03985 are separated by 12 nucleotidesMPMX20_03985 and MPMX20_03986 are separated by 38 nucleotides MPMX20_03982: MPMX20_03982 - Putrescine aminotransferase, at 4,177,602 to 4,178,981 _03982 MPMX20_03983: MPMX20_03983 - hypothetical protein, at 4,179,015 to 4,179,617 _03983 MPMX20_03984: MPMX20_03984 - hypothetical protein, at 4,179,660 to 4,180,346 _03984 MPMX20_03985: MPMX20_03985 - 4-hydroxy-tetrahydrodipicolinate synthase, at 4,180,359 to 4,181,207 _03985 MPMX20_03986: MPMX20_03986 - (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase, at 4,181,246 to 4,181,539 _03986 Position (kb) 4179 4180 4181Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4178.663 kb on + strand, within MPMX20_03982at 4178.664 kb on - strand, within MPMX20_03982at 4178.683 kb on - strand, within MPMX20_03982at 4178.690 kb on - strand, within MPMX20_03982at 4178.715 kb on - strand, within MPMX20_03982at 4178.756 kb on + strand, within MPMX20_03982at 4178.756 kb on + strand, within MPMX20_03982at 4178.756 kb on + strand, within MPMX20_03982at 4178.758 kb on + strand, within MPMX20_03982at 4178.758 kb on + strand, within MPMX20_03982at 4178.764 kb on - strand, within MPMX20_03982at 4178.764 kb on - strand, within MPMX20_03982at 4178.764 kb on - strand, within MPMX20_03982at 4178.784 kb on - strand, within MPMX20_03982at 4178.802 kb on + strand, within MPMX20_03982at 4178.853 kb on + strandat 4178.963 kb on - strandat 4178.965 kb on + strandat 4178.996 kb on + strandat 4179.078 kb on + strand, within MPMX20_03983at 4179.086 kb on - strand, within MPMX20_03983at 4179.160 kb on - strand, within MPMX20_03983at 4179.163 kb on + strand, within MPMX20_03983at 4179.190 kb on - strand, within MPMX20_03983at 4179.233 kb on + strand, within MPMX20_03983at 4179.346 kb on + strand, within MPMX20_03983at 4179.371 kb on + strand, within MPMX20_03983at 4179.465 kb on + strand, within MPMX20_03983at 4179.640 kb on - strandat 4179.640 kb on - strandat 4179.687 kb on - strandat 4179.734 kb on + strand, within MPMX20_03984at 4179.852 kb on + strand, within MPMX20_03984at 4179.855 kb on - strand, within MPMX20_03984at 4179.879 kb on - strand, within MPMX20_03984at 4179.885 kb on + strand, within MPMX20_03984at 4179.895 kb on + strand, within MPMX20_03984at 4179.906 kb on + strand, within MPMX20_03984at 4179.911 kb on + strand, within MPMX20_03984at 4179.919 kb on - strand, within MPMX20_03984at 4179.941 kb on + strand, within MPMX20_03984at 4179.941 kb on + strand, within MPMX20_03984at 4179.941 kb on + strand, within MPMX20_03984at 4179.941 kb on + strand, within MPMX20_03984at 4179.941 kb on + strand, within MPMX20_03984at 4179.941 kb on + strand, within MPMX20_03984at 4180.042 kb on + strand, within MPMX20_03984at 4180.068 kb on - strand, within MPMX20_03984at 4180.076 kb on - strand, within MPMX20_03984at 4180.078 kb on + strand, within MPMX20_03984at 4180.078 kb on + strand, within MPMX20_03984at 4180.146 kb on + strand, within MPMX20_03984at 4180.172 kb on + strand, within MPMX20_03984at 4180.209 kb on + strand, within MPMX20_03984at 4180.257 kb on + strand, within MPMX20_03984at 4180.281 kb on - strandat 4180.408 kb on + strandat 4180.505 kb on + strand, within MPMX20_03985at 4180.518 kb on - strand, within MPMX20_03985at 4180.518 kb on - strand, within MPMX20_03985at 4180.579 kb on + strand, within MPMX20_03985at 4180.641 kb on - strand, within MPMX20_03985at 4180.661 kb on - strand, within MPMX20_03985at 4180.680 kb on - strand, within MPMX20_03985at 4180.695 kb on + strand, within MPMX20_03985at 4180.695 kb on + strand, within MPMX20_03985at 4180.704 kb on - strand, within MPMX20_03985at 4180.712 kb on + strand, within MPMX20_03985at 4180.714 kb on - strand, within MPMX20_03985at 4180.850 kb on + strand, within MPMX20_03985at 4180.888 kb on + strand, within MPMX20_03985at 4180.974 kb on - strand, within MPMX20_03985at 4181.042 kb on + strand, within MPMX20_03985at 4181.127 kb on - strandat 4181.152 kb on + strandat 4181.160 kb on - strandat 4181.204 kb on - strandat 4181.223 kb on + strandat 4181.241 kb on + strandat 4181.292 kb on + strand, within MPMX20_03986at 4181.309 kb on - strand, within MPMX20_03986at 4181.321 kb on + strand, within MPMX20_03986

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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4,178,663 + MPMX20_03982 0.77 +0.5
4,178,664 - MPMX20_03982 0.77 -0.2
4,178,683 - MPMX20_03982 0.78 -2.0
4,178,690 - MPMX20_03982 0.79 +0.0
4,178,715 - MPMX20_03982 0.81 -1.0
4,178,756 + MPMX20_03982 0.84 -0.2
4,178,756 + MPMX20_03982 0.84 +0.5
4,178,756 + MPMX20_03982 0.84 +0.5
4,178,758 + MPMX20_03982 0.84 -1.8
4,178,758 + MPMX20_03982 0.84 -0.3
4,178,764 - MPMX20_03982 0.84 +0.0
4,178,764 - MPMX20_03982 0.84 +0.6
4,178,764 - MPMX20_03982 0.84 +1.5
4,178,784 - MPMX20_03982 0.86 -0.0
4,178,802 + MPMX20_03982 0.87 -1.4
4,178,853 + -1.9
4,178,963 - -0.3
4,178,965 + -0.8
4,178,996 + +0.2
4,179,078 + MPMX20_03983 0.10 +0.5
4,179,086 - MPMX20_03983 0.12 -0.3
4,179,160 - MPMX20_03983 0.24 -0.7
4,179,163 + MPMX20_03983 0.25 +0.6
4,179,190 - MPMX20_03983 0.29 -0.9
4,179,233 + MPMX20_03983 0.36 +1.4
4,179,346 + MPMX20_03983 0.55 -0.2
4,179,371 + MPMX20_03983 0.59 -1.0
4,179,465 + MPMX20_03983 0.75 +1.5
4,179,640 - +0.2
4,179,640 - -2.4
4,179,687 - +0.5
4,179,734 + MPMX20_03984 0.11 -0.1
4,179,852 + MPMX20_03984 0.28 -1.2
4,179,855 - MPMX20_03984 0.28 +0.2
4,179,879 - MPMX20_03984 0.32 +0.3
4,179,885 + MPMX20_03984 0.33 -1.0
4,179,895 + MPMX20_03984 0.34 -1.4
4,179,906 + MPMX20_03984 0.36 +0.2
4,179,911 + MPMX20_03984 0.37 -1.1
4,179,919 - MPMX20_03984 0.38 -1.5
4,179,941 + MPMX20_03984 0.41 +0.4
4,179,941 + MPMX20_03984 0.41 -2.5
4,179,941 + MPMX20_03984 0.41 -0.9
4,179,941 + MPMX20_03984 0.41 -1.7
4,179,941 + MPMX20_03984 0.41 -0.0
4,179,941 + MPMX20_03984 0.41 +0.1
4,180,042 + MPMX20_03984 0.56 -1.1
4,180,068 - MPMX20_03984 0.59 -1.8
4,180,076 - MPMX20_03984 0.61 +1.0
4,180,078 + MPMX20_03984 0.61 -0.7
4,180,078 + MPMX20_03984 0.61 -0.7
4,180,146 + MPMX20_03984 0.71 +1.8
4,180,172 + MPMX20_03984 0.75 -0.6
4,180,209 + MPMX20_03984 0.80 +0.3
4,180,257 + MPMX20_03984 0.87 +0.5
4,180,281 - -0.7
4,180,408 + -0.5
4,180,505 + MPMX20_03985 0.17 +0.3
4,180,518 - MPMX20_03985 0.19 -0.8
4,180,518 - MPMX20_03985 0.19 +1.6
4,180,579 + MPMX20_03985 0.26 -2.0
4,180,641 - MPMX20_03985 0.33 +1.2
4,180,661 - MPMX20_03985 0.36 -1.0
4,180,680 - MPMX20_03985 0.38 +1.5
4,180,695 + MPMX20_03985 0.40 -0.6
4,180,695 + MPMX20_03985 0.40 +1.5
4,180,704 - MPMX20_03985 0.41 -0.5
4,180,712 + MPMX20_03985 0.42 -1.0
4,180,714 - MPMX20_03985 0.42 -0.9
4,180,850 + MPMX20_03985 0.58 -0.1
4,180,888 + MPMX20_03985 0.62 +0.3
4,180,974 - MPMX20_03985 0.72 -1.6
4,181,042 + MPMX20_03985 0.80 +0.5
4,181,127 - +2.1
4,181,152 + +1.3
4,181,160 - +1.9
4,181,204 - -0.7
4,181,223 + -1.3
4,181,241 + +1.5
4,181,292 + MPMX20_03986 0.16 -3.6
4,181,309 - MPMX20_03986 0.21 -2.4
4,181,321 + MPMX20_03986 0.26 -2.1

Or see this region's nucleotide sequence