Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03809 and MPMX20_03810 are separated by 21 nucleotides MPMX20_03810 and MPMX20_03811 overlap by 4 nucleotides MPMX20_03811 and MPMX20_03812 are separated by 3 nucleotides MPMX20_03812 and MPMX20_03813 overlap by 8 nucleotides
MPMX20_03809: MPMX20_03809 - Pyridoxal phosphate homeostasis protein, at 4,014,500 to 4,015,201
_03809
MPMX20_03810: MPMX20_03810 - hypothetical protein, at 4,015,223 to 4,015,789
_03810
MPMX20_03811: MPMX20_03811 - hypothetical protein, at 4,015,786 to 4,016,082
_03811
MPMX20_03812: MPMX20_03812 - dITP/XTP pyrophosphatase, at 4,016,086 to 4,016,679
_03812
MPMX20_03813: MPMX20_03813 - Heme chaperone HemW, at 4,016,672 to 4,017,814
_03813
Position (kb)
4015
4016
4017 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4014.855 kb on + strand, within MPMX20_03809 at 4014.959 kb on + strand, within MPMX20_03809 at 4014.962 kb on - strand, within MPMX20_03809 at 4014.969 kb on + strand, within MPMX20_03809 at 4014.969 kb on + strand, within MPMX20_03809 at 4014.969 kb on + strand, within MPMX20_03809 at 4014.969 kb on + strand, within MPMX20_03809 at 4014.969 kb on + strand, within MPMX20_03809 at 4014.977 kb on - strand, within MPMX20_03809 at 4014.984 kb on + strand, within MPMX20_03809 at 4015.014 kb on - strand, within MPMX20_03809 at 4015.055 kb on - strand, within MPMX20_03809 at 4015.136 kb on + strand at 4015.146 kb on + strand at 4015.146 kb on + strand at 4015.146 kb on + strand at 4015.146 kb on + strand at 4015.146 kb on + strand at 4015.146 kb on + strand at 4015.154 kb on - strand at 4015.154 kb on - strand at 4015.216 kb on - strand at 4015.228 kb on - strand at 4015.254 kb on + strand at 4015.264 kb on + strand at 4015.272 kb on - strand at 4015.279 kb on + strand at 4015.360 kb on + strand, within MPMX20_03810 at 4015.410 kb on + strand, within MPMX20_03810 at 4015.428 kb on + strand, within MPMX20_03810 at 4015.462 kb on + strand, within MPMX20_03810 at 4015.470 kb on - strand, within MPMX20_03810 at 4015.470 kb on - strand, within MPMX20_03810 at 4015.505 kb on + strand, within MPMX20_03810 at 4015.513 kb on - strand, within MPMX20_03810 at 4015.513 kb on - strand, within MPMX20_03810 at 4015.547 kb on - strand, within MPMX20_03810 at 4015.555 kb on + strand, within MPMX20_03810 at 4015.575 kb on + strand, within MPMX20_03810 at 4015.575 kb on + strand, within MPMX20_03810 at 4015.575 kb on + strand, within MPMX20_03810 at 4015.575 kb on + strand, within MPMX20_03810 at 4015.575 kb on + strand, within MPMX20_03810 at 4015.575 kb on + strand, within MPMX20_03810 at 4015.575 kb on + strand, within MPMX20_03810 at 4015.575 kb on + strand, within MPMX20_03810 at 4015.583 kb on - strand, within MPMX20_03810 at 4015.583 kb on - strand, within MPMX20_03810 at 4015.583 kb on - strand, within MPMX20_03810 at 4015.583 kb on - strand, within MPMX20_03810 at 4015.583 kb on - strand, within MPMX20_03810 at 4015.583 kb on - strand, within MPMX20_03810 at 4015.587 kb on + strand, within MPMX20_03810 at 4015.593 kb on + strand, within MPMX20_03810 at 4015.611 kb on + strand, within MPMX20_03810 at 4015.711 kb on - strand, within MPMX20_03810 at 4015.728 kb on + strand, within MPMX20_03810 at 4015.738 kb on + strand at 4015.752 kb on - strand at 4015.795 kb on + strand at 4015.872 kb on + strand, within MPMX20_03811 at 4015.880 kb on - strand, within MPMX20_03811 at 4015.909 kb on - strand, within MPMX20_03811 at 4016.076 kb on + strand at 4016.076 kb on + strand at 4016.076 kb on + strand at 4016.076 kb on + strand at 4016.076 kb on + strand at 4016.076 kb on + strand at 4016.076 kb on + strand at 4016.084 kb on - strand at 4016.084 kb on - strand at 4016.084 kb on - strand at 4016.084 kb on - strand at 4016.084 kb on - strand at 4016.171 kb on - strand, within MPMX20_03812 at 4016.183 kb on + strand, within MPMX20_03812 at 4016.195 kb on - strand, within MPMX20_03812 at 4016.212 kb on + strand, within MPMX20_03812 at 4016.313 kb on + strand, within MPMX20_03812 at 4016.329 kb on + strand, within MPMX20_03812 at 4016.431 kb on + strand, within MPMX20_03812 at 4016.444 kb on + strand, within MPMX20_03812 at 4016.444 kb on + strand, within MPMX20_03812 at 4016.444 kb on - strand, within MPMX20_03812 at 4016.446 kb on + strand, within MPMX20_03812 at 4016.446 kb on + strand, within MPMX20_03812 at 4016.446 kb on + strand, within MPMX20_03812 at 4016.454 kb on - strand, within MPMX20_03812 at 4016.475 kb on + strand, within MPMX20_03812 at 4016.475 kb on + strand, within MPMX20_03812 at 4016.483 kb on - strand, within MPMX20_03812 at 4016.483 kb on - strand, within MPMX20_03812 at 4016.483 kb on - strand, within MPMX20_03812 at 4016.580 kb on + strand, within MPMX20_03812 at 4016.604 kb on - strand, within MPMX20_03812 at 4016.696 kb on - strand at 4016.710 kb on + strand at 4016.716 kb on - strand at 4016.718 kb on - strand at 4016.819 kb on + strand, within MPMX20_03813 at 4017.020 kb on + strand, within MPMX20_03813 at 4017.020 kb on + strand, within MPMX20_03813 at 4017.028 kb on - strand, within MPMX20_03813 at 4017.044 kb on + strand, within MPMX20_03813 at 4017.052 kb on - strand, within MPMX20_03813 at 4017.059 kb on - strand, within MPMX20_03813
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 4,014,855 + MPMX20_03809 0.51 +1.2 4,014,959 + MPMX20_03809 0.65 -2.9 4,014,962 - MPMX20_03809 0.66 +0.0 4,014,969 + MPMX20_03809 0.67 +0.1 4,014,969 + MPMX20_03809 0.67 -2.8 4,014,969 + MPMX20_03809 0.67 -0.5 4,014,969 + MPMX20_03809 0.67 -0.4 4,014,969 + MPMX20_03809 0.67 -2.0 4,014,977 - MPMX20_03809 0.68 -1.0 4,014,984 + MPMX20_03809 0.69 -2.0 4,015,014 - MPMX20_03809 0.73 -1.0 4,015,055 - MPMX20_03809 0.79 -1.7 4,015,136 + +0.2 4,015,146 + -1.5 4,015,146 + +1.0 4,015,146 + +0.7 4,015,146 + -1.1 4,015,146 + -2.7 4,015,146 + -3.6 4,015,154 - +0.0 4,015,154 - -1.9 4,015,216 - +0.4 4,015,228 - -2.2 4,015,254 + +0.1 4,015,264 + -0.8 4,015,272 - +0.3 4,015,279 + -0.0 4,015,360 + MPMX20_03810 0.24 -0.8 4,015,410 + MPMX20_03810 0.33 +0.2 4,015,428 + MPMX20_03810 0.36 -0.2 4,015,462 + MPMX20_03810 0.42 +1.4 4,015,470 - MPMX20_03810 0.44 -0.4 4,015,470 - MPMX20_03810 0.44 -2.0 4,015,505 + MPMX20_03810 0.50 +1.4 4,015,513 - MPMX20_03810 0.51 -0.6 4,015,513 - MPMX20_03810 0.51 -2.3 4,015,547 - MPMX20_03810 0.57 +2.4 4,015,555 + MPMX20_03810 0.59 -2.8 4,015,575 + MPMX20_03810 0.62 -0.3 4,015,575 + MPMX20_03810 0.62 -0.9 4,015,575 + MPMX20_03810 0.62 -2.1 4,015,575 + MPMX20_03810 0.62 -1.9 4,015,575 + MPMX20_03810 0.62 +2.8 4,015,575 + MPMX20_03810 0.62 -0.5 4,015,575 + MPMX20_03810 0.62 -1.1 4,015,575 + MPMX20_03810 0.62 +0.7 4,015,583 - MPMX20_03810 0.63 +0.4 4,015,583 - MPMX20_03810 0.63 +0.1 4,015,583 - MPMX20_03810 0.63 -1.2 4,015,583 - MPMX20_03810 0.63 -1.9 4,015,583 - MPMX20_03810 0.63 +2.6 4,015,583 - MPMX20_03810 0.63 +1.0 4,015,587 + MPMX20_03810 0.64 +0.4 4,015,593 + MPMX20_03810 0.65 -0.8 4,015,611 + MPMX20_03810 0.68 -0.5 4,015,711 - MPMX20_03810 0.86 +0.4 4,015,728 + MPMX20_03810 0.89 +2.5 4,015,738 + -2.2 4,015,752 - -1.3 4,015,795 + +0.9 4,015,872 + MPMX20_03811 0.29 -1.6 4,015,880 - MPMX20_03811 0.32 -2.1 4,015,909 - MPMX20_03811 0.41 -0.8 4,016,076 + -0.2 4,016,076 + +0.4 4,016,076 + -0.8 4,016,076 + +0.7 4,016,076 + -0.9 4,016,076 + +2.7 4,016,076 + +1.1 4,016,084 - +2.2 4,016,084 - +0.6 4,016,084 - +0.8 4,016,084 - -0.2 4,016,084 - -0.6 4,016,171 - MPMX20_03812 0.14 -0.9 4,016,183 + MPMX20_03812 0.16 -2.2 4,016,195 - MPMX20_03812 0.18 -1.3 4,016,212 + MPMX20_03812 0.21 +0.4 4,016,313 + MPMX20_03812 0.38 -0.3 4,016,329 + MPMX20_03812 0.41 +1.3 4,016,431 + MPMX20_03812 0.58 -1.6 4,016,444 + MPMX20_03812 0.60 -0.8 4,016,444 + MPMX20_03812 0.60 +0.6 4,016,444 - MPMX20_03812 0.60 +1.6 4,016,446 + MPMX20_03812 0.61 -0.4 4,016,446 + MPMX20_03812 0.61 -1.0 4,016,446 + MPMX20_03812 0.61 +0.8 4,016,454 - MPMX20_03812 0.62 -1.7 4,016,475 + MPMX20_03812 0.65 -1.5 4,016,475 + MPMX20_03812 0.65 -1.2 4,016,483 - MPMX20_03812 0.67 -1.1 4,016,483 - MPMX20_03812 0.67 -1.5 4,016,483 - MPMX20_03812 0.67 -0.1 4,016,580 + MPMX20_03812 0.83 -1.3 4,016,604 - MPMX20_03812 0.87 -1.8 4,016,696 - -1.4 4,016,710 + -0.1 4,016,716 - -3.0 4,016,718 - +1.1 4,016,819 + MPMX20_03813 0.13 -0.2 4,017,020 + MPMX20_03813 0.30 +0.4 4,017,020 + MPMX20_03813 0.30 -1.1 4,017,028 - MPMX20_03813 0.31 +2.2 4,017,044 + MPMX20_03813 0.33 -0.6 4,017,052 - MPMX20_03813 0.33 +2.3 4,017,059 - MPMX20_03813 0.34 +1.4
Or see this region's nucleotide sequence