Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01994

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01992 and MPMX20_01993 overlap by 1 nucleotidesMPMX20_01993 and MPMX20_01994 are separated by 2 nucleotidesMPMX20_01994 and MPMX20_01995 are separated by 192 nucleotidesMPMX20_01995 and MPMX20_01996 are separated by 35 nucleotides MPMX20_01992: MPMX20_01992 - p-hydroxybenzoic acid efflux pump subunit AaeB, at 2,081,486 to 2,083,519 _01992 MPMX20_01993: MPMX20_01993 - p-hydroxybenzoic acid efflux pump subunit AaeA, at 2,083,519 to 2,084,379 _01993 MPMX20_01994: MPMX20_01994 - hypothetical protein, at 2,084,382 to 2,084,618 _01994 MPMX20_01995: MPMX20_01995 - Transcriptional regulator SlyA, at 2,084,811 to 2,085,245 _01995 MPMX20_01996: MPMX20_01996 - putative diguanylate cyclase DgcT, at 2,085,281 to 2,086,642 _01996 Position (kb) 2084 2085Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2083.387 kb on + strandat 2083.387 kb on + strandat 2083.387 kb on + strandat 2083.417 kb on + strandat 2083.425 kb on - strandat 2083.437 kb on + strandat 2083.445 kb on - strandat 2083.468 kb on - strandat 2083.513 kb on - strandat 2083.565 kb on + strandat 2083.566 kb on - strandat 2083.571 kb on - strandat 2083.571 kb on - strandat 2083.573 kb on - strandat 2083.626 kb on + strand, within MPMX20_01993at 2083.628 kb on - strand, within MPMX20_01993at 2083.669 kb on + strand, within MPMX20_01993at 2083.736 kb on + strand, within MPMX20_01993at 2083.744 kb on - strand, within MPMX20_01993at 2083.766 kb on - strand, within MPMX20_01993at 2083.766 kb on - strand, within MPMX20_01993at 2083.785 kb on + strand, within MPMX20_01993at 2083.825 kb on + strand, within MPMX20_01993at 2083.825 kb on + strand, within MPMX20_01993at 2083.836 kb on - strand, within MPMX20_01993at 2083.958 kb on - strand, within MPMX20_01993at 2083.963 kb on - strand, within MPMX20_01993at 2083.991 kb on + strand, within MPMX20_01993at 2084.022 kb on - strand, within MPMX20_01993at 2084.093 kb on + strand, within MPMX20_01993at 2084.101 kb on - strand, within MPMX20_01993at 2084.211 kb on + strand, within MPMX20_01993at 2084.230 kb on + strand, within MPMX20_01993at 2084.235 kb on + strand, within MPMX20_01993at 2084.235 kb on + strand, within MPMX20_01993at 2084.240 kb on + strand, within MPMX20_01993at 2084.243 kb on - strand, within MPMX20_01993at 2084.243 kb on - strand, within MPMX20_01993at 2084.243 kb on - strand, within MPMX20_01993at 2084.243 kb on - strand, within MPMX20_01993at 2084.243 kb on - strand, within MPMX20_01993at 2084.248 kb on - strand, within MPMX20_01993at 2084.248 kb on - strand, within MPMX20_01993at 2084.248 kb on - strand, within MPMX20_01993at 2084.248 kb on - strand, within MPMX20_01993at 2084.248 kb on - strand, within MPMX20_01993at 2084.248 kb on - strand, within MPMX20_01993at 2084.248 kb on - strand, within MPMX20_01993at 2084.253 kb on - strand, within MPMX20_01993at 2084.255 kb on + strand, within MPMX20_01993at 2084.275 kb on + strand, within MPMX20_01993at 2084.283 kb on - strand, within MPMX20_01993at 2084.283 kb on - strand, within MPMX20_01993at 2084.283 kb on - strand, within MPMX20_01993at 2084.289 kb on - strand, within MPMX20_01993at 2084.331 kb on + strandat 2084.331 kb on + strandat 2084.495 kb on - strand, within MPMX20_01994at 2084.500 kb on + strand, within MPMX20_01994at 2084.533 kb on + strand, within MPMX20_01994at 2084.533 kb on + strand, within MPMX20_01994at 2084.541 kb on - strand, within MPMX20_01994at 2084.541 kb on - strand, within MPMX20_01994at 2084.541 kb on - strand, within MPMX20_01994at 2084.541 kb on - strand, within MPMX20_01994at 2084.541 kb on - strand, within MPMX20_01994at 2084.541 kb on - strand, within MPMX20_01994at 2084.541 kb on - strand, within MPMX20_01994at 2084.541 kb on - strand, within MPMX20_01994at 2084.591 kb on + strand, within MPMX20_01994at 2084.591 kb on + strand, within MPMX20_01994at 2084.599 kb on - strandat 2084.622 kb on + strandat 2084.629 kb on + strandat 2084.637 kb on - strandat 2084.661 kb on + strandat 2084.661 kb on + strandat 2084.661 kb on + strandat 2084.661 kb on + strandat 2084.661 kb on + strandat 2084.662 kb on - strandat 2084.669 kb on - strandat 2084.688 kb on - strandat 2084.690 kb on + strandat 2084.702 kb on + strandat 2084.759 kb on - strandat 2084.828 kb on - strandat 2084.842 kb on + strandat 2084.878 kb on + strand, within MPMX20_01995at 2084.919 kb on - strand, within MPMX20_01995at 2084.921 kb on + strand, within MPMX20_01995at 2084.921 kb on + strand, within MPMX20_01995at 2084.921 kb on + strand, within MPMX20_01995at 2084.921 kb on + strand, within MPMX20_01995at 2084.929 kb on - strand, within MPMX20_01995at 2084.941 kb on + strand, within MPMX20_01995at 2084.944 kb on - strand, within MPMX20_01995at 2084.944 kb on - strand, within MPMX20_01995at 2084.980 kb on + strand, within MPMX20_01995at 2084.980 kb on + strand, within MPMX20_01995at 2085.038 kb on - strand, within MPMX20_01995at 2085.085 kb on - strand, within MPMX20_01995at 2085.183 kb on + strand, within MPMX20_01995at 2085.183 kb on + strand, within MPMX20_01995at 2085.183 kb on - strand, within MPMX20_01995at 2085.213 kb on - strandat 2085.220 kb on + strandat 2085.259 kb on - strandat 2085.364 kb on - strandat 2085.402 kb on - strandat 2085.402 kb on - strandat 2085.402 kb on - strandat 2085.402 kb on - strandat 2085.402 kb on - strandat 2085.435 kb on + strand, within MPMX20_01996at 2085.435 kb on + strand, within MPMX20_01996at 2085.435 kb on + strand, within MPMX20_01996at 2085.435 kb on + strand, within MPMX20_01996at 2085.435 kb on + strand, within MPMX20_01996at 2085.443 kb on - strand, within MPMX20_01996at 2085.443 kb on - strand, within MPMX20_01996at 2085.443 kb on - strand, within MPMX20_01996at 2085.445 kb on + strand, within MPMX20_01996at 2085.460 kb on + strand, within MPMX20_01996at 2085.460 kb on + strand, within MPMX20_01996at 2085.460 kb on + strand, within MPMX20_01996at 2085.468 kb on - strand, within MPMX20_01996at 2085.495 kb on + strand, within MPMX20_01996at 2085.507 kb on + strand, within MPMX20_01996at 2085.507 kb on + strand, within MPMX20_01996at 2085.515 kb on - strand, within MPMX20_01996at 2085.599 kb on + strand, within MPMX20_01996

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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2,083,387 + +0.4
2,083,387 + -0.4
2,083,387 + +1.9
2,083,417 + -2.5
2,083,425 - -0.3
2,083,437 + +1.3
2,083,445 - -0.3
2,083,468 - +2.6
2,083,513 - +1.2
2,083,565 + +1.8
2,083,566 - +1.0
2,083,571 - +1.3
2,083,571 - +2.6
2,083,573 - -0.2
2,083,626 + MPMX20_01993 0.12 -0.2
2,083,628 - MPMX20_01993 0.13 -1.6
2,083,669 + MPMX20_01993 0.17 -0.1
2,083,736 + MPMX20_01993 0.25 -1.7
2,083,744 - MPMX20_01993 0.26 +0.2
2,083,766 - MPMX20_01993 0.29 -0.5
2,083,766 - MPMX20_01993 0.29 -0.1
2,083,785 + MPMX20_01993 0.31 -0.5
2,083,825 + MPMX20_01993 0.36 +2.8
2,083,825 + MPMX20_01993 0.36 +1.3
2,083,836 - MPMX20_01993 0.37 -1.9
2,083,958 - MPMX20_01993 0.51 +2.5
2,083,963 - MPMX20_01993 0.52 -1.0
2,083,991 + MPMX20_01993 0.55 +0.2
2,084,022 - MPMX20_01993 0.58 -1.1
2,084,093 + MPMX20_01993 0.67 -0.5
2,084,101 - MPMX20_01993 0.68 -1.1
2,084,211 + MPMX20_01993 0.80 +1.4
2,084,230 + MPMX20_01993 0.83 +0.8
2,084,235 + MPMX20_01993 0.83 -0.3
2,084,235 + MPMX20_01993 0.83 -0.2
2,084,240 + MPMX20_01993 0.84 +0.5
2,084,243 - MPMX20_01993 0.84 -0.3
2,084,243 - MPMX20_01993 0.84 -0.4
2,084,243 - MPMX20_01993 0.84 +1.1
2,084,243 - MPMX20_01993 0.84 -0.2
2,084,243 - MPMX20_01993 0.84 -0.8
2,084,248 - MPMX20_01993 0.85 -0.8
2,084,248 - MPMX20_01993 0.85 -0.5
2,084,248 - MPMX20_01993 0.85 -2.2
2,084,248 - MPMX20_01993 0.85 +0.1
2,084,248 - MPMX20_01993 0.85 -1.8
2,084,248 - MPMX20_01993 0.85 +1.0
2,084,248 - MPMX20_01993 0.85 +0.2
2,084,253 - MPMX20_01993 0.85 +3.5
2,084,255 + MPMX20_01993 0.85 -0.4
2,084,275 + MPMX20_01993 0.88 +4.6
2,084,283 - MPMX20_01993 0.89 +0.8
2,084,283 - MPMX20_01993 0.89 +0.0
2,084,283 - MPMX20_01993 0.89 +2.4
2,084,289 - MPMX20_01993 0.89 -2.8
2,084,331 + +0.4
2,084,331 + +1.2
2,084,495 - MPMX20_01994 0.48 +0.6
2,084,500 + MPMX20_01994 0.50 -0.3
2,084,533 + MPMX20_01994 0.64 +1.4
2,084,533 + MPMX20_01994 0.64 +4.3
2,084,541 - MPMX20_01994 0.67 +1.5
2,084,541 - MPMX20_01994 0.67 -0.1
2,084,541 - MPMX20_01994 0.67 -1.2
2,084,541 - MPMX20_01994 0.67 +2.2
2,084,541 - MPMX20_01994 0.67 +0.9
2,084,541 - MPMX20_01994 0.67 -1.5
2,084,541 - MPMX20_01994 0.67 +0.8
2,084,541 - MPMX20_01994 0.67 -1.8
2,084,591 + MPMX20_01994 0.88 +0.5
2,084,591 + MPMX20_01994 0.88 -1.8
2,084,599 - -1.0
2,084,622 + +0.8
2,084,629 + +1.1
2,084,637 - +1.6
2,084,661 + -1.3
2,084,661 + -0.6
2,084,661 + -1.8
2,084,661 + -1.7
2,084,661 + -2.7
2,084,662 - -0.4
2,084,669 - +0.1
2,084,688 - -0.7
2,084,690 + -0.8
2,084,702 + -0.1
2,084,759 - +0.3
2,084,828 - -1.6
2,084,842 + +0.6
2,084,878 + MPMX20_01995 0.15 -2.1
2,084,919 - MPMX20_01995 0.25 -3.2
2,084,921 + MPMX20_01995 0.25 -1.2
2,084,921 + MPMX20_01995 0.25 -0.2
2,084,921 + MPMX20_01995 0.25 -2.0
2,084,921 + MPMX20_01995 0.25 +1.1
2,084,929 - MPMX20_01995 0.27 -0.4
2,084,941 + MPMX20_01995 0.30 -0.9
2,084,944 - MPMX20_01995 0.31 -3.7
2,084,944 - MPMX20_01995 0.31 -1.7
2,084,980 + MPMX20_01995 0.39 -0.1
2,084,980 + MPMX20_01995 0.39 -1.2
2,085,038 - MPMX20_01995 0.52 -2.6
2,085,085 - MPMX20_01995 0.63 -1.5
2,085,183 + MPMX20_01995 0.86 -0.4
2,085,183 + MPMX20_01995 0.86 -1.6
2,085,183 - MPMX20_01995 0.86 -1.2
2,085,213 - -0.8
2,085,220 + +0.7
2,085,259 - +1.8
2,085,364 - +0.8
2,085,402 - -0.4
2,085,402 - -0.9
2,085,402 - +0.1
2,085,402 - -1.0
2,085,402 - +0.8
2,085,435 + MPMX20_01996 0.11 +2.2
2,085,435 + MPMX20_01996 0.11 -0.8
2,085,435 + MPMX20_01996 0.11 -0.0
2,085,435 + MPMX20_01996 0.11 +2.2
2,085,435 + MPMX20_01996 0.11 -2.2
2,085,443 - MPMX20_01996 0.12 -0.4
2,085,443 - MPMX20_01996 0.12 -0.3
2,085,443 - MPMX20_01996 0.12 +0.7
2,085,445 + MPMX20_01996 0.12 -0.2
2,085,460 + MPMX20_01996 0.13 +0.4
2,085,460 + MPMX20_01996 0.13 -0.1
2,085,460 + MPMX20_01996 0.13 +0.2
2,085,468 - MPMX20_01996 0.14 -0.2
2,085,495 + MPMX20_01996 0.16 +1.9
2,085,507 + MPMX20_01996 0.17 -3.0
2,085,507 + MPMX20_01996 0.17 +1.9
2,085,515 - MPMX20_01996 0.17 -1.4
2,085,599 + MPMX20_01996 0.23 +0.9

Or see this region's nucleotide sequence