Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00705

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00703 and MPMX20_00704 are separated by 211 nucleotidesMPMX20_00704 and MPMX20_00705 are separated by 14 nucleotidesMPMX20_00705 and MPMX20_00706 overlap by 1 nucleotides MPMX20_00703: MPMX20_00703 - Right origin-binding protein, at 723,610 to 724,479 _00703 MPMX20_00704: MPMX20_00704 - hypothetical protein, at 724,691 to 725,161 _00704 MPMX20_00705: MPMX20_00705 - Transcriptional regulatory protein CreB, at 725,176 to 725,865 _00705 MPMX20_00706: MPMX20_00706 - Sensor protein CreC, at 725,865 to 727,289 _00706 Position (kb) 725 726Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 724.176 kb on + strand, within MPMX20_00703at 724.203 kb on - strand, within MPMX20_00703at 724.263 kb on - strand, within MPMX20_00703at 724.278 kb on + strand, within MPMX20_00703at 724.278 kb on + strand, within MPMX20_00703at 724.286 kb on - strand, within MPMX20_00703at 724.318 kb on + strand, within MPMX20_00703at 724.318 kb on + strand, within MPMX20_00703at 724.382 kb on - strand, within MPMX20_00703at 724.400 kb on + strandat 724.400 kb on + strandat 724.412 kb on + strandat 724.433 kb on + strandat 724.433 kb on + strandat 724.447 kb on - strandat 724.452 kb on - strandat 724.483 kb on - strandat 724.501 kb on - strandat 724.501 kb on - strandat 724.513 kb on + strandat 724.513 kb on + strandat 724.518 kb on - strandat 724.521 kb on - strandat 724.521 kb on - strandat 724.521 kb on - strandat 724.528 kb on - strandat 724.528 kb on - strandat 724.576 kb on + strandat 724.718 kb on + strandat 724.723 kb on + strandat 724.723 kb on + strandat 724.723 kb on + strandat 724.723 kb on + strandat 724.723 kb on + strandat 724.726 kb on - strandat 724.734 kb on - strandat 724.735 kb on + strandat 724.735 kb on + strandat 724.735 kb on + strandat 724.743 kb on - strand, within MPMX20_00704at 724.748 kb on - strand, within MPMX20_00704at 724.749 kb on + strand, within MPMX20_00704at 724.759 kb on + strand, within MPMX20_00704at 724.759 kb on + strand, within MPMX20_00704at 724.759 kb on + strand, within MPMX20_00704at 724.767 kb on - strand, within MPMX20_00704at 724.767 kb on - strand, within MPMX20_00704at 724.767 kb on - strand, within MPMX20_00704at 724.794 kb on + strand, within MPMX20_00704at 724.802 kb on - strand, within MPMX20_00704at 724.875 kb on - strand, within MPMX20_00704at 724.893 kb on + strand, within MPMX20_00704at 724.893 kb on + strand, within MPMX20_00704at 724.893 kb on + strand, within MPMX20_00704at 724.901 kb on - strand, within MPMX20_00704at 724.901 kb on - strand, within MPMX20_00704at 724.901 kb on - strand, within MPMX20_00704at 724.901 kb on - strand, within MPMX20_00704at 724.901 kb on - strand, within MPMX20_00704at 724.932 kb on + strand, within MPMX20_00704at 724.942 kb on + strand, within MPMX20_00704at 724.947 kb on + strand, within MPMX20_00704at 724.955 kb on - strand, within MPMX20_00704at 724.958 kb on - strand, within MPMX20_00704at 724.993 kb on - strand, within MPMX20_00704at 725.072 kb on + strand, within MPMX20_00704at 725.086 kb on + strand, within MPMX20_00704at 725.094 kb on - strand, within MPMX20_00704at 725.158 kb on - strandat 725.185 kb on + strandat 725.185 kb on + strandat 725.193 kb on - strandat 725.193 kb on - strandat 725.193 kb on - strandat 725.193 kb on - strandat 725.193 kb on - strandat 725.193 kb on - strandat 725.193 kb on - strandat 725.198 kb on - strandat 725.198 kb on - strandat 725.203 kb on - strandat 725.227 kb on + strandat 725.230 kb on + strandat 725.240 kb on - strandat 725.240 kb on - strandat 725.243 kb on - strandat 725.263 kb on - strand, within MPMX20_00705at 725.263 kb on - strand, within MPMX20_00705at 725.360 kb on + strand, within MPMX20_00705at 725.368 kb on - strand, within MPMX20_00705at 725.368 kb on - strand, within MPMX20_00705at 725.391 kb on + strand, within MPMX20_00705at 725.506 kb on + strand, within MPMX20_00705at 725.514 kb on - strand, within MPMX20_00705at 725.525 kb on - strand, within MPMX20_00705at 725.525 kb on - strand, within MPMX20_00705at 725.525 kb on - strand, within MPMX20_00705at 725.527 kb on + strand, within MPMX20_00705at 725.615 kb on + strand, within MPMX20_00705at 725.618 kb on + strand, within MPMX20_00705at 725.661 kb on + strand, within MPMX20_00705at 725.669 kb on - strand, within MPMX20_00705at 725.722 kb on + strand, within MPMX20_00705at 725.777 kb on - strand, within MPMX20_00705at 725.841 kb on + strandat 725.841 kb on + strandat 725.841 kb on + strandat 725.849 kb on + strandat 725.857 kb on - strandat 725.901 kb on - strandat 725.941 kb on - strandat 725.941 kb on - strandat 725.956 kb on + strandat 725.956 kb on + strandat 725.961 kb on + strandat 725.964 kb on - strandat 725.974 kb on - strandat 726.066 kb on + strand, within MPMX20_00706at 726.066 kb on + strand, within MPMX20_00706at 726.225 kb on + strand, within MPMX20_00706at 726.280 kb on + strand, within MPMX20_00706at 726.283 kb on - strand, within MPMX20_00706at 726.341 kb on + strand, within MPMX20_00706at 726.442 kb on + strand, within MPMX20_00706at 726.450 kb on - strand, within MPMX20_00706at 726.479 kb on + strand, within MPMX20_00706at 726.548 kb on + strand, within MPMX20_00706at 726.548 kb on + strand, within MPMX20_00706at 726.581 kb on + strand, within MPMX20_00706at 726.623 kb on + strand, within MPMX20_00706at 726.623 kb on + strand, within MPMX20_00706at 726.729 kb on + strand, within MPMX20_00706at 726.837 kb on - strand, within MPMX20_00706

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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724,176 + MPMX20_00703 0.65 -1.6
724,203 - MPMX20_00703 0.68 -0.9
724,263 - MPMX20_00703 0.75 -0.8
724,278 + MPMX20_00703 0.77 -0.2
724,278 + MPMX20_00703 0.77 -0.7
724,286 - MPMX20_00703 0.78 +0.7
724,318 + MPMX20_00703 0.81 -0.2
724,318 + MPMX20_00703 0.81 -1.4
724,382 - MPMX20_00703 0.89 -1.1
724,400 + -0.6
724,400 + -0.2
724,412 + +1.0
724,433 + +0.7
724,433 + -1.1
724,447 - +2.4
724,452 - +3.3
724,483 - -1.1
724,501 - +0.7
724,501 - +0.3
724,513 + -0.7
724,513 + -1.1
724,518 - -0.3
724,521 - -0.8
724,521 - +0.2
724,521 - +1.4
724,528 - -0.8
724,528 - -2.5
724,576 + +0.3
724,718 + +2.4
724,723 + +0.8
724,723 + -1.8
724,723 + +0.5
724,723 + -1.5
724,723 + -1.5
724,726 - +0.4
724,734 - +0.4
724,735 + -0.3
724,735 + -0.1
724,735 + +1.1
724,743 - MPMX20_00704 0.11 -0.3
724,748 - MPMX20_00704 0.12 +1.1
724,749 + MPMX20_00704 0.12 -1.8
724,759 + MPMX20_00704 0.14 +0.9
724,759 + MPMX20_00704 0.14 -0.2
724,759 + MPMX20_00704 0.14 -1.8
724,767 - MPMX20_00704 0.16 +2.2
724,767 - MPMX20_00704 0.16 -0.3
724,767 - MPMX20_00704 0.16 +0.6
724,794 + MPMX20_00704 0.22 -0.1
724,802 - MPMX20_00704 0.24 -0.8
724,875 - MPMX20_00704 0.39 +0.5
724,893 + MPMX20_00704 0.43 +0.5
724,893 + MPMX20_00704 0.43 -0.6
724,893 + MPMX20_00704 0.43 -2.4
724,901 - MPMX20_00704 0.45 +2.2
724,901 - MPMX20_00704 0.45 -0.6
724,901 - MPMX20_00704 0.45 -0.7
724,901 - MPMX20_00704 0.45 -0.4
724,901 - MPMX20_00704 0.45 +0.2
724,932 + MPMX20_00704 0.51 -0.1
724,942 + MPMX20_00704 0.53 +1.7
724,947 + MPMX20_00704 0.54 +1.1
724,955 - MPMX20_00704 0.56 +0.8
724,958 - MPMX20_00704 0.57 +0.8
724,993 - MPMX20_00704 0.64 +1.2
725,072 + MPMX20_00704 0.81 -0.1
725,086 + MPMX20_00704 0.84 -3.3
725,094 - MPMX20_00704 0.86 +1.0
725,158 - -1.0
725,185 + -0.2
725,185 + +0.9
725,193 - +4.1
725,193 - +1.6
725,193 - +2.4
725,193 - -0.2
725,193 - +0.5
725,193 - +1.9
725,193 - -0.2
725,198 - +1.0
725,198 - +0.9
725,203 - -1.1
725,227 + +0.3
725,230 + -0.2
725,240 - -2.0
725,240 - +0.1
725,243 - +1.6
725,263 - MPMX20_00705 0.13 +2.2
725,263 - MPMX20_00705 0.13 -1.1
725,360 + MPMX20_00705 0.27 +0.1
725,368 - MPMX20_00705 0.28 +0.8
725,368 - MPMX20_00705 0.28 -0.7
725,391 + MPMX20_00705 0.31 +0.1
725,506 + MPMX20_00705 0.48 +2.4
725,514 - MPMX20_00705 0.49 -0.9
725,525 - MPMX20_00705 0.51 +3.0
725,525 - MPMX20_00705 0.51 +0.4
725,525 - MPMX20_00705 0.51 -1.1
725,527 + MPMX20_00705 0.51 -1.1
725,615 + MPMX20_00705 0.64 +1.5
725,618 + MPMX20_00705 0.64 -0.1
725,661 + MPMX20_00705 0.70 +0.4
725,669 - MPMX20_00705 0.71 +1.6
725,722 + MPMX20_00705 0.79 +1.4
725,777 - MPMX20_00705 0.87 -0.2
725,841 + -0.2
725,841 + +1.8
725,841 + +2.1
725,849 + -0.5
725,857 - -1.1
725,901 - -0.5
725,941 - +0.5
725,941 - +0.4
725,956 + +1.8
725,956 + -3.0
725,961 + +0.7
725,964 - +0.6
725,974 - +0.3
726,066 + MPMX20_00706 0.14 -3.1
726,066 + MPMX20_00706 0.14 -1.0
726,225 + MPMX20_00706 0.25 +0.0
726,280 + MPMX20_00706 0.29 -1.9
726,283 - MPMX20_00706 0.29 -0.6
726,341 + MPMX20_00706 0.33 -0.1
726,442 + MPMX20_00706 0.40 +2.0
726,450 - MPMX20_00706 0.41 -0.1
726,479 + MPMX20_00706 0.43 +0.8
726,548 + MPMX20_00706 0.48 +2.7
726,548 + MPMX20_00706 0.48 -0.1
726,581 + MPMX20_00706 0.50 +0.0
726,623 + MPMX20_00706 0.53 -0.8
726,623 + MPMX20_00706 0.53 +0.9
726,729 + MPMX20_00706 0.61 +2.9
726,837 - MPMX20_00706 0.68 +0.1

Or see this region's nucleotide sequence