Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03418 and MPMX20_03419 are separated by 173 nucleotides MPMX20_03419 and MPMX20_03420 are separated by 54 nucleotides
MPMX20_03418: MPMX20_03418 - putative 3-phenylpropionic acid transporter, at 3,602,896 to 3,604,035
_03418
MPMX20_03419: MPMX20_03419 - Inner membrane protein YphA, at 3,604,209 to 3,604,631
_03419
MPMX20_03420: MPMX20_03420 - Serine hydroxymethyltransferase, at 3,604,686 to 3,605,939
_03420
Position (kb)
3604
3605 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 3603.240 kb on + strand, within MPMX20_03418 at 3603.359 kb on + strand, within MPMX20_03418 at 3603.478 kb on + strand, within MPMX20_03418 at 3603.493 kb on - strand, within MPMX20_03418 at 3603.547 kb on - strand, within MPMX20_03418 at 3603.600 kb on + strand, within MPMX20_03418 at 3603.600 kb on + strand, within MPMX20_03418 at 3603.600 kb on + strand, within MPMX20_03418 at 3603.608 kb on - strand, within MPMX20_03418 at 3603.608 kb on - strand, within MPMX20_03418 at 3603.608 kb on - strand, within MPMX20_03418 at 3603.608 kb on - strand, within MPMX20_03418 at 3603.654 kb on - strand, within MPMX20_03418 at 3603.677 kb on + strand, within MPMX20_03418 at 3603.689 kb on + strand, within MPMX20_03418 at 3603.698 kb on + strand, within MPMX20_03418 at 3603.723 kb on + strand, within MPMX20_03418 at 3603.723 kb on + strand, within MPMX20_03418 at 3603.785 kb on + strand, within MPMX20_03418 at 3603.793 kb on - strand, within MPMX20_03418 at 3603.796 kb on + strand, within MPMX20_03418 at 3603.821 kb on + strand, within MPMX20_03418 at 3603.896 kb on + strand, within MPMX20_03418 at 3603.896 kb on + strand, within MPMX20_03418 at 3603.939 kb on + strand at 3603.939 kb on + strand at 3603.944 kb on + strand at 3603.953 kb on + strand at 3603.998 kb on + strand at 3604.005 kb on + strand at 3604.005 kb on + strand at 3604.032 kb on - strand at 3604.041 kb on - strand at 3604.137 kb on + strand at 3604.145 kb on - strand at 3604.150 kb on - strand at 3604.150 kb on - strand at 3604.243 kb on + strand at 3604.243 kb on + strand at 3604.259 kb on - strand, within MPMX20_03419 at 3604.267 kb on - strand, within MPMX20_03419 at 3604.267 kb on - strand, within MPMX20_03419 at 3604.306 kb on + strand, within MPMX20_03419 at 3604.306 kb on + strand, within MPMX20_03419 at 3604.306 kb on + strand, within MPMX20_03419 at 3604.316 kb on + strand, within MPMX20_03419 at 3604.322 kb on + strand, within MPMX20_03419 at 3604.348 kb on - strand, within MPMX20_03419 at 3604.355 kb on + strand, within MPMX20_03419 at 3604.355 kb on + strand, within MPMX20_03419 at 3604.355 kb on + strand, within MPMX20_03419 at 3604.355 kb on + strand, within MPMX20_03419 at 3604.355 kb on + strand, within MPMX20_03419 at 3604.355 kb on + strand, within MPMX20_03419 at 3604.355 kb on + strand, within MPMX20_03419 at 3604.355 kb on + strand, within MPMX20_03419 at 3604.355 kb on + strand, within MPMX20_03419 at 3604.355 kb on + strand, within MPMX20_03419 at 3604.355 kb on + strand, within MPMX20_03419 at 3604.357 kb on + strand, within MPMX20_03419 at 3604.360 kb on - strand, within MPMX20_03419 at 3604.362 kb on + strand, within MPMX20_03419 at 3604.363 kb on - strand, within MPMX20_03419 at 3604.363 kb on - strand, within MPMX20_03419 at 3604.363 kb on - strand, within MPMX20_03419 at 3604.363 kb on - strand, within MPMX20_03419 at 3604.363 kb on - strand, within MPMX20_03419 at 3604.363 kb on - strand, within MPMX20_03419 at 3604.363 kb on - strand, within MPMX20_03419 at 3604.363 kb on - strand, within MPMX20_03419 at 3604.369 kb on - strand, within MPMX20_03419 at 3604.370 kb on - strand, within MPMX20_03419 at 3604.394 kb on + strand, within MPMX20_03419 at 3604.396 kb on + strand, within MPMX20_03419 at 3604.401 kb on - strand, within MPMX20_03419 at 3604.411 kb on + strand, within MPMX20_03419 at 3604.445 kb on + strand, within MPMX20_03419 at 3604.460 kb on - strand, within MPMX20_03419 at 3604.460 kb on - strand, within MPMX20_03419 at 3604.460 kb on - strand, within MPMX20_03419 at 3604.465 kb on - strand, within MPMX20_03419 at 3604.494 kb on + strand, within MPMX20_03419 at 3604.499 kb on + strand, within MPMX20_03419 at 3604.502 kb on + strand, within MPMX20_03419 at 3604.504 kb on + strand, within MPMX20_03419 at 3604.507 kb on - strand, within MPMX20_03419 at 3604.519 kb on + strand, within MPMX20_03419 at 3604.519 kb on + strand, within MPMX20_03419 at 3604.544 kb on - strand, within MPMX20_03419 at 3604.575 kb on + strand, within MPMX20_03419 at 3604.615 kb on + strand at 3604.615 kb on + strand at 3604.615 kb on + strand at 3604.615 kb on + strand at 3604.618 kb on - strand at 3604.623 kb on - strand at 3604.623 kb on - strand at 3604.623 kb on - strand at 3604.623 kb on - strand at 3604.623 kb on - strand at 3604.623 kb on - strand at 3604.623 kb on - strand at 3604.625 kb on + strand at 3604.625 kb on + strand at 3604.625 kb on + strand at 3604.625 kb on + strand at 3604.633 kb on - strand at 3604.633 kb on - strand at 3604.633 kb on - strand at 3604.633 kb on - strand at 3604.633 kb on - strand at 3604.633 kb on - strand at 3604.633 kb on - strand at 3604.692 kb on - strand at 3604.697 kb on - strand at 3604.704 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 3,603,240 + MPMX20_03418 0.30 -1.1 3,603,359 + MPMX20_03418 0.41 +0.7 3,603,478 + MPMX20_03418 0.51 -1.8 3,603,493 - MPMX20_03418 0.52 +0.8 3,603,547 - MPMX20_03418 0.57 +0.4 3,603,600 + MPMX20_03418 0.62 -0.8 3,603,600 + MPMX20_03418 0.62 +0.5 3,603,600 + MPMX20_03418 0.62 -0.6 3,603,608 - MPMX20_03418 0.62 -1.6 3,603,608 - MPMX20_03418 0.62 +1.1 3,603,608 - MPMX20_03418 0.62 +2.4 3,603,608 - MPMX20_03418 0.62 +0.3 3,603,654 - MPMX20_03418 0.66 -3.3 3,603,677 + MPMX20_03418 0.69 +0.7 3,603,689 + MPMX20_03418 0.70 +2.2 3,603,698 + MPMX20_03418 0.70 +1.4 3,603,723 + MPMX20_03418 0.73 -2.6 3,603,723 + MPMX20_03418 0.73 -2.2 3,603,785 + MPMX20_03418 0.78 +1.6 3,603,793 - MPMX20_03418 0.79 +1.1 3,603,796 + MPMX20_03418 0.79 +1.4 3,603,821 + MPMX20_03418 0.81 -2.0 3,603,896 + MPMX20_03418 0.88 +1.9 3,603,896 + MPMX20_03418 0.88 +0.0 3,603,939 + -3.1 3,603,939 + +1.1 3,603,944 + +1.1 3,603,953 + -0.4 3,603,998 + +0.7 3,604,005 + +0.5 3,604,005 + +3.4 3,604,032 - +0.2 3,604,041 - +0.2 3,604,137 + +1.7 3,604,145 - +0.4 3,604,150 - -2.6 3,604,150 - -0.8 3,604,243 + -2.5 3,604,243 + -1.7 3,604,259 - MPMX20_03419 0.12 +2.0 3,604,267 - MPMX20_03419 0.14 -3.0 3,604,267 - MPMX20_03419 0.14 -0.2 3,604,306 + MPMX20_03419 0.23 -2.3 3,604,306 + MPMX20_03419 0.23 +2.1 3,604,306 + MPMX20_03419 0.23 +3.9 3,604,316 + MPMX20_03419 0.25 +3.7 3,604,322 + MPMX20_03419 0.27 +0.8 3,604,348 - MPMX20_03419 0.33 -2.7 3,604,355 + MPMX20_03419 0.35 +0.4 3,604,355 + MPMX20_03419 0.35 +0.5 3,604,355 + MPMX20_03419 0.35 +3.5 3,604,355 + MPMX20_03419 0.35 +3.0 3,604,355 + MPMX20_03419 0.35 -3.3 3,604,355 + MPMX20_03419 0.35 -1.6 3,604,355 + MPMX20_03419 0.35 +0.7 3,604,355 + MPMX20_03419 0.35 -0.8 3,604,355 + MPMX20_03419 0.35 +0.6 3,604,355 + MPMX20_03419 0.35 -0.2 3,604,355 + MPMX20_03419 0.35 +2.2 3,604,357 + MPMX20_03419 0.35 +1.2 3,604,360 - MPMX20_03419 0.36 +0.6 3,604,362 + MPMX20_03419 0.36 -1.0 3,604,363 - MPMX20_03419 0.36 -1.3 3,604,363 - MPMX20_03419 0.36 +1.0 3,604,363 - MPMX20_03419 0.36 +0.8 3,604,363 - MPMX20_03419 0.36 -3.4 3,604,363 - MPMX20_03419 0.36 -2.5 3,604,363 - MPMX20_03419 0.36 +0.1 3,604,363 - MPMX20_03419 0.36 +2.5 3,604,363 - MPMX20_03419 0.36 +1.4 3,604,369 - MPMX20_03419 0.38 +0.7 3,604,370 - MPMX20_03419 0.38 +1.9 3,604,394 + MPMX20_03419 0.44 -1.6 3,604,396 + MPMX20_03419 0.44 -0.2 3,604,401 - MPMX20_03419 0.45 +2.2 3,604,411 + MPMX20_03419 0.48 +1.6 3,604,445 + MPMX20_03419 0.56 +1.0 3,604,460 - MPMX20_03419 0.59 +0.4 3,604,460 - MPMX20_03419 0.59 +1.4 3,604,460 - MPMX20_03419 0.59 +1.4 3,604,465 - MPMX20_03419 0.61 +1.2 3,604,494 + MPMX20_03419 0.67 +1.1 3,604,499 + MPMX20_03419 0.69 -0.8 3,604,502 + MPMX20_03419 0.69 +2.5 3,604,504 + MPMX20_03419 0.70 -0.1 3,604,507 - MPMX20_03419 0.70 -2.7 3,604,519 + MPMX20_03419 0.73 -3.7 3,604,519 + MPMX20_03419 0.73 +0.0 3,604,544 - MPMX20_03419 0.79 +4.1 3,604,575 + MPMX20_03419 0.87 -0.5 3,604,615 + +0.8 3,604,615 + +0.4 3,604,615 + -3.0 3,604,615 + +2.8 3,604,618 - -3.0 3,604,623 - +0.2 3,604,623 - -2.2 3,604,623 - +1.2 3,604,623 - +1.5 3,604,623 - -3.1 3,604,623 - -1.1 3,604,623 - -2.2 3,604,625 + -3.8 3,604,625 + +2.1 3,604,625 + -2.0 3,604,625 + +0.2 3,604,633 - -3.2 3,604,633 - +1.1 3,604,633 - -0.2 3,604,633 - +0.9 3,604,633 - +0.0 3,604,633 - -3.6 3,604,633 - +2.0 3,604,692 - +0.2 3,604,697 - -1.7 3,604,704 - -3.6
Or see this region's nucleotide sequence