Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03368

Experiment: Ethanol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03366 and MPMX20_03367 are separated by 9 nucleotidesMPMX20_03367 and MPMX20_03368 are separated by 14 nucleotidesMPMX20_03368 and MPMX20_03369 are separated by 12 nucleotides MPMX20_03366: MPMX20_03366 - 5-deoxy-glucuronate isomerase, at 3,542,109 to 3,542,921 _03366 MPMX20_03367: MPMX20_03367 - Inosose dehydratase, at 3,542,931 to 3,543,821 _03367 MPMX20_03368: MPMX20_03368 - 5-dehydro-2-deoxygluconokinase, at 3,543,836 to 3,545,740 _03368 MPMX20_03369: MPMX20_03369 - Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase, at 3,545,753 to 3,546,886 _03369 Position (kb) 3543 3544 3545 3546Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3542.870 kb on + strandat 3542.870 kb on + strandat 3542.878 kb on - strandat 3542.878 kb on - strandat 3542.878 kb on - strandat 3542.929 kb on + strandat 3542.969 kb on - strandat 3542.970 kb on + strandat 3542.974 kb on - strandat 3542.976 kb on + strandat 3542.994 kb on - strandat 3543.096 kb on + strand, within MPMX20_03367at 3543.119 kb on - strand, within MPMX20_03367at 3543.176 kb on - strand, within MPMX20_03367at 3543.198 kb on - strand, within MPMX20_03367at 3543.225 kb on + strand, within MPMX20_03367at 3543.228 kb on - strand, within MPMX20_03367at 3543.271 kb on + strand, within MPMX20_03367at 3543.301 kb on - strand, within MPMX20_03367at 3543.347 kb on - strand, within MPMX20_03367at 3543.401 kb on + strand, within MPMX20_03367at 3543.424 kb on - strand, within MPMX20_03367at 3543.436 kb on - strand, within MPMX20_03367at 3543.499 kb on - strand, within MPMX20_03367at 3543.524 kb on + strand, within MPMX20_03367at 3543.558 kb on + strand, within MPMX20_03367at 3543.566 kb on - strand, within MPMX20_03367at 3543.589 kb on - strand, within MPMX20_03367at 3543.677 kb on - strand, within MPMX20_03367at 3543.695 kb on + strand, within MPMX20_03367at 3543.695 kb on + strand, within MPMX20_03367at 3543.727 kb on - strand, within MPMX20_03367at 3543.742 kb on - strandat 3543.760 kb on - strandat 3543.784 kb on + strandat 3543.806 kb on - strandat 3543.833 kb on + strandat 3543.871 kb on + strandat 3543.871 kb on + strandat 3543.872 kb on - strandat 3543.943 kb on - strandat 3543.948 kb on + strandat 3543.948 kb on + strandat 3543.956 kb on - strandat 3543.956 kb on - strandat 3544.045 kb on + strand, within MPMX20_03368at 3544.068 kb on - strand, within MPMX20_03368at 3544.068 kb on - strand, within MPMX20_03368at 3544.119 kb on + strand, within MPMX20_03368at 3544.189 kb on + strand, within MPMX20_03368at 3544.195 kb on + strand, within MPMX20_03368at 3544.196 kb on - strand, within MPMX20_03368at 3544.196 kb on - strand, within MPMX20_03368at 3544.196 kb on - strand, within MPMX20_03368at 3544.197 kb on - strand, within MPMX20_03368at 3544.197 kb on - strand, within MPMX20_03368at 3544.227 kb on - strand, within MPMX20_03368at 3544.229 kb on - strand, within MPMX20_03368at 3544.269 kb on + strand, within MPMX20_03368at 3544.269 kb on + strand, within MPMX20_03368at 3544.269 kb on + strand, within MPMX20_03368at 3544.277 kb on - strand, within MPMX20_03368at 3544.277 kb on - strand, within MPMX20_03368at 3544.277 kb on - strand, within MPMX20_03368at 3544.311 kb on - strand, within MPMX20_03368at 3544.373 kb on + strand, within MPMX20_03368at 3544.454 kb on + strand, within MPMX20_03368at 3544.551 kb on + strand, within MPMX20_03368at 3544.554 kb on - strand, within MPMX20_03368at 3544.592 kb on + strand, within MPMX20_03368at 3544.592 kb on + strand, within MPMX20_03368at 3544.663 kb on + strand, within MPMX20_03368at 3544.663 kb on + strand, within MPMX20_03368at 3544.663 kb on + strand, within MPMX20_03368at 3544.663 kb on + strand, within MPMX20_03368at 3544.671 kb on - strand, within MPMX20_03368at 3544.671 kb on - strand, within MPMX20_03368at 3544.671 kb on - strand, within MPMX20_03368at 3544.714 kb on - strand, within MPMX20_03368at 3544.781 kb on - strand, within MPMX20_03368at 3544.781 kb on - strand, within MPMX20_03368at 3544.847 kb on + strand, within MPMX20_03368at 3544.852 kb on + strand, within MPMX20_03368at 3544.874 kb on - strand, within MPMX20_03368at 3544.930 kb on + strand, within MPMX20_03368at 3544.959 kb on - strand, within MPMX20_03368at 3544.988 kb on + strand, within MPMX20_03368at 3545.011 kb on - strand, within MPMX20_03368at 3545.079 kb on + strand, within MPMX20_03368at 3545.142 kb on + strand, within MPMX20_03368at 3545.143 kb on + strand, within MPMX20_03368at 3545.152 kb on - strand, within MPMX20_03368at 3545.224 kb on - strand, within MPMX20_03368at 3545.224 kb on - strand, within MPMX20_03368at 3545.240 kb on + strand, within MPMX20_03368at 3545.248 kb on - strand, within MPMX20_03368at 3545.248 kb on - strand, within MPMX20_03368at 3545.248 kb on - strand, within MPMX20_03368at 3545.284 kb on - strand, within MPMX20_03368at 3545.312 kb on - strand, within MPMX20_03368at 3545.358 kb on + strand, within MPMX20_03368at 3545.425 kb on + strand, within MPMX20_03368at 3545.451 kb on - strand, within MPMX20_03368at 3545.467 kb on - strand, within MPMX20_03368at 3545.648 kb on + strandat 3545.685 kb on + strandat 3545.685 kb on + strandat 3545.685 kb on + strandat 3545.685 kb on + strandat 3545.693 kb on - strandat 3545.693 kb on - strandat 3545.693 kb on - strandat 3545.700 kb on - strandat 3545.778 kb on - strandat 3545.808 kb on + strandat 3545.853 kb on - strandat 3545.976 kb on + strand, within MPMX20_03369at 3545.976 kb on + strand, within MPMX20_03369at 3546.055 kb on + strand, within MPMX20_03369at 3546.063 kb on - strand, within MPMX20_03369at 3546.090 kb on - strand, within MPMX20_03369at 3546.161 kb on - strand, within MPMX20_03369at 3546.187 kb on - strand, within MPMX20_03369at 3546.221 kb on + strand, within MPMX20_03369at 3546.261 kb on + strand, within MPMX20_03369at 3546.269 kb on - strand, within MPMX20_03369at 3546.276 kb on - strand, within MPMX20_03369at 3546.279 kb on + strand, within MPMX20_03369at 3546.352 kb on + strand, within MPMX20_03369at 3546.352 kb on + strand, within MPMX20_03369at 3546.352 kb on + strand, within MPMX20_03369at 3546.352 kb on + strand, within MPMX20_03369at 3546.352 kb on + strand, within MPMX20_03369at 3546.352 kb on + strand, within MPMX20_03369at 3546.352 kb on + strand, within MPMX20_03369at 3546.352 kb on + strand, within MPMX20_03369at 3546.352 kb on + strand, within MPMX20_03369at 3546.360 kb on - strand, within MPMX20_03369at 3546.360 kb on - strand, within MPMX20_03369at 3546.360 kb on - strand, within MPMX20_03369at 3546.360 kb on - strand, within MPMX20_03369at 3546.360 kb on - strand, within MPMX20_03369at 3546.441 kb on - strand, within MPMX20_03369at 3546.739 kb on - strand, within MPMX20_03369

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanol (C)
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3,542,870 + +0.3
3,542,870 + -2.1
3,542,878 - +0.8
3,542,878 - -3.5
3,542,878 - +2.3
3,542,929 + -1.2
3,542,969 - +2.1
3,542,970 + +0.4
3,542,974 - +0.1
3,542,976 + -0.8
3,542,994 - +1.0
3,543,096 + MPMX20_03367 0.19 -3.9
3,543,119 - MPMX20_03367 0.21 -3.3
3,543,176 - MPMX20_03367 0.27 +0.3
3,543,198 - MPMX20_03367 0.30 -2.1
3,543,225 + MPMX20_03367 0.33 -0.7
3,543,228 - MPMX20_03367 0.33 -2.6
3,543,271 + MPMX20_03367 0.38 -1.0
3,543,301 - MPMX20_03367 0.42 -1.1
3,543,347 - MPMX20_03367 0.47 -0.3
3,543,401 + MPMX20_03367 0.53 +1.5
3,543,424 - MPMX20_03367 0.55 +0.3
3,543,436 - MPMX20_03367 0.57 +1.7
3,543,499 - MPMX20_03367 0.64 -1.2
3,543,524 + MPMX20_03367 0.67 -1.2
3,543,558 + MPMX20_03367 0.70 -0.3
3,543,566 - MPMX20_03367 0.71 -0.9
3,543,589 - MPMX20_03367 0.74 -0.5
3,543,677 - MPMX20_03367 0.84 -2.1
3,543,695 + MPMX20_03367 0.86 +1.8
3,543,695 + MPMX20_03367 0.86 -3.9
3,543,727 - MPMX20_03367 0.89 -3.4
3,543,742 - +2.8
3,543,760 - +0.1
3,543,784 + -2.8
3,543,806 - -3.0
3,543,833 + +1.5
3,543,871 + -1.6
3,543,871 + -0.3
3,543,872 - +0.2
3,543,943 - -2.8
3,543,948 + +1.2
3,543,948 + -3.4
3,543,956 - -1.7
3,543,956 - -1.7
3,544,045 + MPMX20_03368 0.11 +1.9
3,544,068 - MPMX20_03368 0.12 +2.1
3,544,068 - MPMX20_03368 0.12 -3.5
3,544,119 + MPMX20_03368 0.15 +1.1
3,544,189 + MPMX20_03368 0.19 +0.3
3,544,195 + MPMX20_03368 0.19 +1.8
3,544,196 - MPMX20_03368 0.19 +1.1
3,544,196 - MPMX20_03368 0.19 -2.3
3,544,196 - MPMX20_03368 0.19 -3.9
3,544,197 - MPMX20_03368 0.19 +2.9
3,544,197 - MPMX20_03368 0.19 -2.7
3,544,227 - MPMX20_03368 0.21 -3.9
3,544,229 - MPMX20_03368 0.21 +0.8
3,544,269 + MPMX20_03368 0.23 +0.7
3,544,269 + MPMX20_03368 0.23 -0.9
3,544,269 + MPMX20_03368 0.23 -1.3
3,544,277 - MPMX20_03368 0.23 +0.4
3,544,277 - MPMX20_03368 0.23 -1.7
3,544,277 - MPMX20_03368 0.23 -1.3
3,544,311 - MPMX20_03368 0.25 +2.0
3,544,373 + MPMX20_03368 0.28 -0.3
3,544,454 + MPMX20_03368 0.32 -0.9
3,544,551 + MPMX20_03368 0.38 +1.7
3,544,554 - MPMX20_03368 0.38 -2.4
3,544,592 + MPMX20_03368 0.40 +2.8
3,544,592 + MPMX20_03368 0.40 +3.1
3,544,663 + MPMX20_03368 0.43 +0.9
3,544,663 + MPMX20_03368 0.43 -2.0
3,544,663 + MPMX20_03368 0.43 -1.7
3,544,663 + MPMX20_03368 0.43 +1.8
3,544,671 - MPMX20_03368 0.44 +0.9
3,544,671 - MPMX20_03368 0.44 -0.5
3,544,671 - MPMX20_03368 0.44 -0.7
3,544,714 - MPMX20_03368 0.46 -2.6
3,544,781 - MPMX20_03368 0.50 +0.9
3,544,781 - MPMX20_03368 0.50 +2.1
3,544,847 + MPMX20_03368 0.53 -2.6
3,544,852 + MPMX20_03368 0.53 +0.6
3,544,874 - MPMX20_03368 0.54 -0.9
3,544,930 + MPMX20_03368 0.57 -2.9
3,544,959 - MPMX20_03368 0.59 +1.7
3,544,988 + MPMX20_03368 0.60 -1.1
3,545,011 - MPMX20_03368 0.62 +1.6
3,545,079 + MPMX20_03368 0.65 -0.3
3,545,142 + MPMX20_03368 0.69 +0.5
3,545,143 + MPMX20_03368 0.69 +1.3
3,545,152 - MPMX20_03368 0.69 +0.3
3,545,224 - MPMX20_03368 0.73 -3.3
3,545,224 - MPMX20_03368 0.73 +2.8
3,545,240 + MPMX20_03368 0.74 -1.3
3,545,248 - MPMX20_03368 0.74 +2.0
3,545,248 - MPMX20_03368 0.74 -0.3
3,545,248 - MPMX20_03368 0.74 +1.0
3,545,284 - MPMX20_03368 0.76 -1.5
3,545,312 - MPMX20_03368 0.77 -1.3
3,545,358 + MPMX20_03368 0.80 -1.8
3,545,425 + MPMX20_03368 0.83 +1.8
3,545,451 - MPMX20_03368 0.85 -4.4
3,545,467 - MPMX20_03368 0.86 +1.9
3,545,648 + +1.7
3,545,685 + +1.4
3,545,685 + +0.0
3,545,685 + -2.4
3,545,685 + -1.3
3,545,693 - +1.2
3,545,693 - +1.5
3,545,693 - +1.2
3,545,700 - +0.6
3,545,778 - -2.9
3,545,808 + +1.2
3,545,853 - -0.7
3,545,976 + MPMX20_03369 0.20 -3.5
3,545,976 + MPMX20_03369 0.20 -2.7
3,546,055 + MPMX20_03369 0.27 -1.9
3,546,063 - MPMX20_03369 0.27 +0.3
3,546,090 - MPMX20_03369 0.30 +1.9
3,546,161 - MPMX20_03369 0.36 -2.1
3,546,187 - MPMX20_03369 0.38 -2.3
3,546,221 + MPMX20_03369 0.41 +1.8
3,546,261 + MPMX20_03369 0.45 +0.5
3,546,269 - MPMX20_03369 0.46 -2.5
3,546,276 - MPMX20_03369 0.46 -1.6
3,546,279 + MPMX20_03369 0.46 -2.3
3,546,352 + MPMX20_03369 0.53 +3.2
3,546,352 + MPMX20_03369 0.53 +0.8
3,546,352 + MPMX20_03369 0.53 +3.1
3,546,352 + MPMX20_03369 0.53 -1.8
3,546,352 + MPMX20_03369 0.53 +0.0
3,546,352 + MPMX20_03369 0.53 +0.1
3,546,352 + MPMX20_03369 0.53 +0.3
3,546,352 + MPMX20_03369 0.53 +2.4
3,546,352 + MPMX20_03369 0.53 -2.8
3,546,360 - MPMX20_03369 0.54 +1.7
3,546,360 - MPMX20_03369 0.54 +0.5
3,546,360 - MPMX20_03369 0.54 +3.3
3,546,360 - MPMX20_03369 0.54 +1.1
3,546,360 - MPMX20_03369 0.54 -2.1
3,546,441 - MPMX20_03369 0.61 -3.2
3,546,739 - MPMX20_03369 0.87 -3.1

Or see this region's nucleotide sequence