Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02109 and MPMX20_02110 are separated by 190 nucleotides MPMX20_02110 and MPMX20_02111 are separated by 138 nucleotides
MPMX20_02109: MPMX20_02109 - IS3 family transposase ISEal1, at 2,202,303 to 2,202,881
_02109
MPMX20_02110: MPMX20_02110 - hypothetical protein, at 2,203,072 to 2,203,167
_02110
MPMX20_02111: MPMX20_02111 - hypothetical protein, at 2,203,306 to 2,203,884
_02111
Position (kb)
2203
2204 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2202.074 kb on - strand at 2202.074 kb on - strand at 2202.074 kb on - strand at 2202.074 kb on - strand at 2202.081 kb on + strand at 2202.115 kb on + strand at 2202.138 kb on - strand at 2202.148 kb on - strand at 2202.195 kb on + strand at 2202.209 kb on + strand at 2202.218 kb on - strand at 2202.222 kb on + strand at 2202.230 kb on - strand at 2202.288 kb on + strand at 2202.293 kb on + strand at 2202.293 kb on + strand at 2202.296 kb on - strand at 2202.296 kb on - strand at 2202.361 kb on - strand, within MPMX20_02109 at 2202.361 kb on - strand, within MPMX20_02109 at 2202.363 kb on - strand, within MPMX20_02109 at 2202.378 kb on - strand, within MPMX20_02109 at 2202.378 kb on - strand, within MPMX20_02109 at 2202.383 kb on - strand, within MPMX20_02109 at 2202.419 kb on - strand, within MPMX20_02109 at 2202.427 kb on + strand, within MPMX20_02109 at 2202.448 kb on + strand, within MPMX20_02109 at 2202.486 kb on + strand, within MPMX20_02109 at 2202.496 kb on + strand, within MPMX20_02109 at 2202.583 kb on + strand, within MPMX20_02109 at 2202.591 kb on - strand, within MPMX20_02109 at 2202.662 kb on - strand, within MPMX20_02109 at 2202.706 kb on - strand, within MPMX20_02109 at 2202.811 kb on + strand, within MPMX20_02109 at 2202.833 kb on + strand at 2202.841 kb on - strand at 2202.841 kb on - strand at 2202.841 kb on - strand at 2202.923 kb on + strand at 2202.953 kb on - strand at 2203.046 kb on - strand at 2203.086 kb on + strand, within MPMX20_02110 at 2203.092 kb on + strand, within MPMX20_02110 at 2203.093 kb on + strand, within MPMX20_02110 at 2203.093 kb on + strand, within MPMX20_02110 at 2203.093 kb on + strand, within MPMX20_02110 at 2203.093 kb on + strand, within MPMX20_02110 at 2203.094 kb on - strand, within MPMX20_02110 at 2203.100 kb on - strand, within MPMX20_02110 at 2203.100 kb on - strand, within MPMX20_02110 at 2203.101 kb on - strand, within MPMX20_02110 at 2203.101 kb on - strand, within MPMX20_02110 at 2203.111 kb on + strand, within MPMX20_02110 at 2203.111 kb on + strand, within MPMX20_02110 at 2203.111 kb on + strand, within MPMX20_02110 at 2203.113 kb on + strand, within MPMX20_02110 at 2203.113 kb on + strand, within MPMX20_02110 at 2203.119 kb on - strand, within MPMX20_02110 at 2203.119 kb on - strand, within MPMX20_02110 at 2203.121 kb on - strand, within MPMX20_02110 at 2203.126 kb on - strand, within MPMX20_02110 at 2203.155 kb on - strand, within MPMX20_02110 at 2203.162 kb on + strand at 2203.169 kb on + strand at 2203.169 kb on + strand at 2203.169 kb on + strand at 2203.169 kb on + strand at 2203.169 kb on + strand at 2203.169 kb on + strand at 2203.188 kb on - strand at 2203.194 kb on + strand at 2203.214 kb on + strand at 2203.239 kb on + strand at 2203.317 kb on + strand at 2203.382 kb on - strand, within MPMX20_02111 at 2203.382 kb on - strand, within MPMX20_02111 at 2203.384 kb on - strand, within MPMX20_02111 at 2203.384 kb on - strand, within MPMX20_02111 at 2203.384 kb on - strand, within MPMX20_02111 at 2203.392 kb on - strand, within MPMX20_02111 at 2203.392 kb on - strand, within MPMX20_02111 at 2203.392 kb on - strand, within MPMX20_02111 at 2203.392 kb on - strand, within MPMX20_02111 at 2203.396 kb on + strand, within MPMX20_02111 at 2203.397 kb on - strand, within MPMX20_02111 at 2203.403 kb on + strand, within MPMX20_02111 at 2203.404 kb on - strand, within MPMX20_02111 at 2203.408 kb on + strand, within MPMX20_02111 at 2203.408 kb on + strand, within MPMX20_02111 at 2203.408 kb on + strand, within MPMX20_02111 at 2203.408 kb on + strand, within MPMX20_02111 at 2203.408 kb on + strand, within MPMX20_02111 at 2203.416 kb on - strand, within MPMX20_02111 at 2203.416 kb on - strand, within MPMX20_02111 at 2203.423 kb on - strand, within MPMX20_02111 at 2203.423 kb on - strand, within MPMX20_02111 at 2203.444 kb on - strand, within MPMX20_02111 at 2203.447 kb on + strand, within MPMX20_02111 at 2203.460 kb on - strand, within MPMX20_02111 at 2203.466 kb on + strand, within MPMX20_02111 at 2203.466 kb on + strand, within MPMX20_02111 at 2203.474 kb on - strand, within MPMX20_02111 at 2203.509 kb on - strand, within MPMX20_02111 at 2203.567 kb on - strand, within MPMX20_02111 at 2203.567 kb on - strand, within MPMX20_02111 at 2203.574 kb on + strand, within MPMX20_02111 at 2203.574 kb on + strand, within MPMX20_02111 at 2203.582 kb on - strand, within MPMX20_02111 at 2203.582 kb on - strand, within MPMX20_02111 at 2203.582 kb on - strand, within MPMX20_02111 at 2203.582 kb on - strand, within MPMX20_02111 at 2203.584 kb on + strand, within MPMX20_02111 at 2203.590 kb on - strand, within MPMX20_02111 at 2203.591 kb on + strand, within MPMX20_02111 at 2203.592 kb on - strand, within MPMX20_02111 at 2203.592 kb on - strand, within MPMX20_02111 at 2203.592 kb on - strand, within MPMX20_02111 at 2203.592 kb on - strand, within MPMX20_02111 at 2203.592 kb on - strand, within MPMX20_02111 at 2203.598 kb on - strand, within MPMX20_02111 at 2203.599 kb on - strand, within MPMX20_02111 at 2203.599 kb on - strand, within MPMX20_02111 at 2203.619 kb on - strand, within MPMX20_02111 at 2203.623 kb on + strand, within MPMX20_02111 at 2203.631 kb on - strand, within MPMX20_02111 at 2203.672 kb on + strand, within MPMX20_02111 at 2203.704 kb on - strand, within MPMX20_02111 at 2203.764 kb on + strand, within MPMX20_02111 at 2203.772 kb on - strand, within MPMX20_02111 at 2203.772 kb on - strand, within MPMX20_02111 at 2203.772 kb on - strand, within MPMX20_02111 at 2203.772 kb on - strand, within MPMX20_02111 at 2203.772 kb on - strand, within MPMX20_02111 at 2203.787 kb on + strand, within MPMX20_02111 at 2203.787 kb on + strand, within MPMX20_02111 at 2203.787 kb on + strand, within MPMX20_02111 at 2203.815 kb on - strand, within MPMX20_02111 at 2203.832 kb on - strand at 2203.832 kb on - strand at 2203.832 kb on - strand at 2203.832 kb on - strand at 2203.832 kb on - strand at 2203.840 kb on - strand at 2203.840 kb on - strand at 2203.840 kb on - strand at 2203.840 kb on - strand at 2203.840 kb on - strand at 2203.840 kb on - strand at 2203.840 kb on - strand at 2203.840 kb on - strand at 2203.842 kb on - strand at 2203.842 kb on - strand at 2203.842 kb on - strand at 2203.842 kb on - strand at 2203.842 kb on - strand at 2203.883 kb on + strand at 2203.901 kb on + strand at 2203.903 kb on + strand at 2203.903 kb on + strand at 2203.909 kb on - strand at 2203.945 kb on + strand at 2203.953 kb on - strand at 2203.953 kb on - strand at 2203.953 kb on - strand at 2203.963 kb on + strand at 2204.010 kb on + strand at 2204.010 kb on + strand at 2204.010 kb on + strand at 2204.018 kb on - strand at 2204.018 kb on - strand at 2204.018 kb on - strand at 2204.024 kb on + strand at 2204.028 kb on - strand at 2204.028 kb on - strand at 2204.028 kb on - strand at 2204.029 kb on - strand at 2204.038 kb on + strand at 2204.038 kb on + strand at 2204.043 kb on + strand at 2204.043 kb on + strand at 2204.043 kb on + strand at 2204.043 kb on + strand at 2204.043 kb on + strand at 2204.050 kb on + strand at 2204.051 kb on - strand at 2204.051 kb on - strand at 2204.060 kb on + strand at 2204.060 kb on + strand at 2204.060 kb on + strand at 2204.060 kb on + strand at 2204.060 kb on + strand at 2204.060 kb on + strand at 2204.060 kb on + strand at 2204.060 kb on + strand at 2204.060 kb on + strand at 2204.060 kb on + strand at 2204.060 kb on + strand at 2204.060 kb on + strand at 2204.068 kb on - strand at 2204.111 kb on + strand at 2204.111 kb on + strand at 2204.111 kb on + strand at 2204.111 kb on + strand at 2204.116 kb on + strand at 2204.116 kb on + strand at 2204.117 kb on + strand at 2204.119 kb on - strand at 2204.119 kb on - strand at 2204.119 kb on - strand at 2204.119 kb on - strand at 2204.119 kb on - strand at 2204.119 kb on - strand at 2204.122 kb on + strand at 2204.127 kb on + strand at 2204.127 kb on + strand at 2204.127 kb on + strand at 2204.127 kb on + strand at 2204.127 kb on + strand at 2204.127 kb on + strand at 2204.127 kb on + strand at 2204.127 kb on + strand at 2204.132 kb on + strand at 2204.132 kb on + strand at 2204.132 kb on + strand at 2204.135 kb on - strand at 2204.135 kb on - strand at 2204.135 kb on - strand at 2204.135 kb on - strand at 2204.137 kb on + strand at 2204.137 kb on + strand at 2204.137 kb on + strand at 2204.137 kb on + strand at 2204.140 kb on - strand at 2204.140 kb on - strand at 2204.145 kb on - strand at 2204.145 kb on - strand at 2204.145 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 2,202,074 - +1.1 2,202,074 - -0.1 2,202,074 - -1.3 2,202,074 - +1.5 2,202,081 + +0.8 2,202,115 + +1.3 2,202,138 - -1.2 2,202,148 - +0.9 2,202,195 + -0.2 2,202,209 + -1.5 2,202,218 - +0.7 2,202,222 + +0.5 2,202,230 - -1.8 2,202,288 + +1.2 2,202,293 + +0.6 2,202,293 + +1.0 2,202,296 - -2.8 2,202,296 - -2.8 2,202,361 - MPMX20_02109 0.10 +0.6 2,202,361 - MPMX20_02109 0.10 -2.7 2,202,363 - MPMX20_02109 0.10 +1.3 2,202,378 - MPMX20_02109 0.13 -1.7 2,202,378 - MPMX20_02109 0.13 +1.3 2,202,383 - MPMX20_02109 0.14 -2.2 2,202,419 - MPMX20_02109 0.20 -2.1 2,202,427 + MPMX20_02109 0.21 +1.3 2,202,448 + MPMX20_02109 0.25 -1.5 2,202,486 + MPMX20_02109 0.32 +0.3 2,202,496 + MPMX20_02109 0.33 +0.8 2,202,583 + MPMX20_02109 0.48 -1.0 2,202,591 - MPMX20_02109 0.50 +0.2 2,202,662 - MPMX20_02109 0.62 +1.1 2,202,706 - MPMX20_02109 0.70 -1.5 2,202,811 + MPMX20_02109 0.88 -2.5 2,202,833 + -3.3 2,202,841 - +1.3 2,202,841 - -2.4 2,202,841 - -3.3 2,202,923 + +2.2 2,202,953 - +1.5 2,203,046 - -2.6 2,203,086 + MPMX20_02110 0.15 -2.4 2,203,092 + MPMX20_02110 0.21 +0.8 2,203,093 + MPMX20_02110 0.22 -1.2 2,203,093 + MPMX20_02110 0.22 +0.0 2,203,093 + MPMX20_02110 0.22 +0.4 2,203,093 + MPMX20_02110 0.22 -3.1 2,203,094 - MPMX20_02110 0.23 -3.3 2,203,100 - MPMX20_02110 0.29 -2.5 2,203,100 - MPMX20_02110 0.29 -1.8 2,203,101 - MPMX20_02110 0.30 -3.1 2,203,101 - MPMX20_02110 0.30 -1.7 2,203,111 + MPMX20_02110 0.41 -4.6 2,203,111 + MPMX20_02110 0.41 -3.0 2,203,111 + MPMX20_02110 0.41 +0.6 2,203,113 + MPMX20_02110 0.43 +0.0 2,203,113 + MPMX20_02110 0.43 +0.1 2,203,119 - MPMX20_02110 0.49 -2.0 2,203,119 - MPMX20_02110 0.49 -0.0 2,203,121 - MPMX20_02110 0.51 -2.7 2,203,126 - MPMX20_02110 0.56 +0.6 2,203,155 - MPMX20_02110 0.86 +1.6 2,203,162 + -2.8 2,203,169 + +1.0 2,203,169 + -0.5 2,203,169 + +1.2 2,203,169 + -0.4 2,203,169 + +0.3 2,203,169 + +1.8 2,203,188 - -1.0 2,203,194 + -1.0 2,203,214 + +0.3 2,203,239 + -2.2 2,203,317 + -1.0 2,203,382 - MPMX20_02111 0.13 +1.6 2,203,382 - MPMX20_02111 0.13 +0.6 2,203,384 - MPMX20_02111 0.13 -2.2 2,203,384 - MPMX20_02111 0.13 +1.8 2,203,384 - MPMX20_02111 0.13 -0.4 2,203,392 - MPMX20_02111 0.15 -2.0 2,203,392 - MPMX20_02111 0.15 -1.2 2,203,392 - MPMX20_02111 0.15 -0.7 2,203,392 - MPMX20_02111 0.15 -4.1 2,203,396 + MPMX20_02111 0.16 +0.0 2,203,397 - MPMX20_02111 0.16 +2.0 2,203,403 + MPMX20_02111 0.17 +0.0 2,203,404 - MPMX20_02111 0.17 +2.8 2,203,408 + MPMX20_02111 0.18 -3.5 2,203,408 + MPMX20_02111 0.18 +0.8 2,203,408 + MPMX20_02111 0.18 -3.0 2,203,408 + MPMX20_02111 0.18 +0.1 2,203,408 + MPMX20_02111 0.18 -1.2 2,203,416 - MPMX20_02111 0.19 -2.7 2,203,416 - MPMX20_02111 0.19 -3.1 2,203,423 - MPMX20_02111 0.20 -2.6 2,203,423 - MPMX20_02111 0.20 +2.2 2,203,444 - MPMX20_02111 0.24 -1.5 2,203,447 + MPMX20_02111 0.24 -0.7 2,203,460 - MPMX20_02111 0.27 -1.4 2,203,466 + MPMX20_02111 0.28 -1.2 2,203,466 + MPMX20_02111 0.28 -2.3 2,203,474 - MPMX20_02111 0.29 -2.3 2,203,509 - MPMX20_02111 0.35 -3.4 2,203,567 - MPMX20_02111 0.45 -1.5 2,203,567 - MPMX20_02111 0.45 -2.0 2,203,574 + MPMX20_02111 0.46 -1.0 2,203,574 + MPMX20_02111 0.46 -1.2 2,203,582 - MPMX20_02111 0.48 -2.0 2,203,582 - MPMX20_02111 0.48 -2.6 2,203,582 - MPMX20_02111 0.48 +0.9 2,203,582 - MPMX20_02111 0.48 -2.2 2,203,584 + MPMX20_02111 0.48 +0.6 2,203,590 - MPMX20_02111 0.49 -2.5 2,203,591 + MPMX20_02111 0.49 +0.6 2,203,592 - MPMX20_02111 0.49 -2.4 2,203,592 - MPMX20_02111 0.49 +0.8 2,203,592 - MPMX20_02111 0.49 +0.6 2,203,592 - MPMX20_02111 0.49 -0.7 2,203,592 - MPMX20_02111 0.49 +2.5 2,203,598 - MPMX20_02111 0.50 +0.0 2,203,599 - MPMX20_02111 0.51 +0.6 2,203,599 - MPMX20_02111 0.51 -3.0 2,203,619 - MPMX20_02111 0.54 +1.7 2,203,623 + MPMX20_02111 0.55 +1.9 2,203,631 - MPMX20_02111 0.56 -2.4 2,203,672 + MPMX20_02111 0.63 -2.0 2,203,704 - MPMX20_02111 0.69 -1.7 2,203,764 + MPMX20_02111 0.79 +0.0 2,203,772 - MPMX20_02111 0.80 -1.2 2,203,772 - MPMX20_02111 0.80 -1.0 2,203,772 - MPMX20_02111 0.80 -2.7 2,203,772 - MPMX20_02111 0.80 +1.1 2,203,772 - MPMX20_02111 0.80 +2.7 2,203,787 + MPMX20_02111 0.83 -3.1 2,203,787 + MPMX20_02111 0.83 -2.5 2,203,787 + MPMX20_02111 0.83 -2.0 2,203,815 - MPMX20_02111 0.88 +2.6 2,203,832 - -0.4 2,203,832 - +2.7 2,203,832 - -2.9 2,203,832 - +2.4 2,203,832 - -0.2 2,203,840 - -2.3 2,203,840 - -3.4 2,203,840 - +3.7 2,203,840 - -1.7 2,203,840 - +0.6 2,203,840 - -0.7 2,203,840 - -2.1 2,203,840 - -1.2 2,203,842 - -2.9 2,203,842 - +0.6 2,203,842 - +1.5 2,203,842 - -1.4 2,203,842 - +3.7 2,203,883 + -1.5 2,203,901 + -2.0 2,203,903 + -1.2 2,203,903 + -1.7 2,203,909 - -1.0 2,203,945 + +1.2 2,203,953 - -0.7 2,203,953 - +2.9 2,203,953 - -2.3 2,203,963 + -1.8 2,204,010 + +1.9 2,204,010 + -0.7 2,204,010 + -0.7 2,204,018 - +0.0 2,204,018 - -3.5 2,204,018 - -0.7 2,204,024 + -3.1 2,204,028 - -1.7 2,204,028 - -2.8 2,204,028 - +1.4 2,204,029 - -2.1 2,204,038 + -1.2 2,204,038 + +1.0 2,204,043 + -3.6 2,204,043 + +3.0 2,204,043 + +0.1 2,204,043 + -1.7 2,204,043 + +0.6 2,204,050 + +2.5 2,204,051 - +0.5 2,204,051 - -1.2 2,204,060 + +2.3 2,204,060 + +0.6 2,204,060 + -2.6 2,204,060 + -2.0 2,204,060 + -2.4 2,204,060 + -0.7 2,204,060 + +0.0 2,204,060 + +0.8 2,204,060 + -2.0 2,204,060 + -3.4 2,204,060 + -2.0 2,204,060 + -1.1 2,204,068 - -0.3 2,204,111 + +0.6 2,204,111 + -0.3 2,204,111 + +0.4 2,204,111 + -2.7 2,204,116 + +2.0 2,204,116 + -1.2 2,204,117 + -2.4 2,204,119 - +1.4 2,204,119 - -2.7 2,204,119 - +2.1 2,204,119 - -4.7 2,204,119 - +0.7 2,204,119 - +0.1 2,204,122 + -3.2 2,204,127 + -2.5 2,204,127 + +0.4 2,204,127 + -0.7 2,204,127 + -2.2 2,204,127 + +2.1 2,204,127 + +0.6 2,204,127 + -0.5 2,204,127 + -1.2 2,204,132 + -2.0 2,204,132 + -1.0 2,204,132 + -1.7 2,204,135 - +3.9 2,204,135 - -2.4 2,204,135 - -0.7 2,204,135 - -3.7 2,204,137 + -3.1 2,204,137 + -1.8 2,204,137 + +1.3 2,204,137 + -1.8 2,204,140 - -3.1 2,204,140 - -3.0 2,204,145 - -1.0 2,204,145 - +1.3 2,204,145 - -1.0
Or see this region's nucleotide sequence