Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02064

Experiment: Ethanol (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_02063 and MPMX20_02064 are separated by 130 nucleotidesMPMX20_02064 and MPMX20_02065 overlap by 66 nucleotides MPMX20_02063: MPMX20_02063 - Protein mlc, at 2,156,929 to 2,158,149 _02063 MPMX20_02064: MPMX20_02064 - ATP-dependent dethiobiotin synthetase BioD 1, at 2,158,280 to 2,158,975 _02064 MPMX20_02065: MPMX20_02065 - Voltage-gated ClC-type chloride channel ClcB, at 2,158,910 to 2,160,220 _02065 Position (kb) 2158 2159Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2157.305 kb on + strand, within MPMX20_02063at 2157.353 kb on + strand, within MPMX20_02063at 2157.423 kb on - strand, within MPMX20_02063at 2157.443 kb on + strand, within MPMX20_02063at 2157.451 kb on - strand, within MPMX20_02063at 2157.462 kb on + strand, within MPMX20_02063at 2157.543 kb on + strand, within MPMX20_02063at 2157.590 kb on + strand, within MPMX20_02063at 2157.637 kb on + strand, within MPMX20_02063at 2157.652 kb on - strand, within MPMX20_02063at 2157.717 kb on - strand, within MPMX20_02063at 2157.749 kb on + strand, within MPMX20_02063at 2157.765 kb on + strand, within MPMX20_02063at 2157.765 kb on + strand, within MPMX20_02063at 2157.765 kb on + strand, within MPMX20_02063at 2157.765 kb on + strand, within MPMX20_02063at 2157.770 kb on + strand, within MPMX20_02063at 2157.773 kb on - strand, within MPMX20_02063at 2157.773 kb on - strand, within MPMX20_02063at 2157.773 kb on - strand, within MPMX20_02063at 2157.773 kb on - strand, within MPMX20_02063at 2157.773 kb on - strand, within MPMX20_02063at 2157.773 kb on - strand, within MPMX20_02063at 2157.782 kb on - strand, within MPMX20_02063at 2157.807 kb on + strand, within MPMX20_02063at 2157.815 kb on - strand, within MPMX20_02063at 2157.828 kb on - strand, within MPMX20_02063at 2157.853 kb on - strand, within MPMX20_02063at 2157.955 kb on + strand, within MPMX20_02063at 2157.963 kb on - strand, within MPMX20_02063at 2157.963 kb on - strand, within MPMX20_02063at 2157.991 kb on + strand, within MPMX20_02063at 2158.085 kb on + strandat 2158.090 kb on + strandat 2158.090 kb on + strandat 2158.093 kb on - strandat 2158.093 kb on - strandat 2158.098 kb on - strandat 2158.098 kb on - strandat 2158.098 kb on - strandat 2158.098 kb on - strandat 2158.098 kb on - strandat 2158.098 kb on - strandat 2158.098 kb on - strandat 2158.123 kb on + strandat 2158.137 kb on + strandat 2158.143 kb on + strandat 2158.151 kb on - strandat 2158.182 kb on + strandat 2158.182 kb on + strandat 2158.182 kb on + strandat 2158.187 kb on + strandat 2158.190 kb on - strandat 2158.190 kb on - strandat 2158.190 kb on - strandat 2158.190 kb on - strandat 2158.190 kb on - strandat 2158.192 kb on + strandat 2158.204 kb on + strandat 2158.215 kb on - strandat 2158.331 kb on + strandat 2158.339 kb on - strandat 2158.339 kb on - strandat 2158.354 kb on + strand, within MPMX20_02064at 2158.387 kb on + strand, within MPMX20_02064at 2158.395 kb on - strand, within MPMX20_02064at 2158.517 kb on + strand, within MPMX20_02064at 2158.525 kb on - strand, within MPMX20_02064at 2158.525 kb on - strand, within MPMX20_02064at 2158.535 kb on - strand, within MPMX20_02064at 2158.559 kb on - strand, within MPMX20_02064at 2158.609 kb on + strand, within MPMX20_02064at 2158.668 kb on + strand, within MPMX20_02064at 2158.695 kb on + strand, within MPMX20_02064at 2158.797 kb on + strand, within MPMX20_02064at 2158.811 kb on - strand, within MPMX20_02064at 2158.821 kb on + strand, within MPMX20_02064at 2158.879 kb on + strand, within MPMX20_02064at 2158.893 kb on + strand, within MPMX20_02064at 2158.901 kb on - strand, within MPMX20_02064at 2158.901 kb on - strand, within MPMX20_02064at 2158.911 kb on - strandat 2158.921 kb on - strandat 2159.067 kb on + strand, within MPMX20_02065at 2159.067 kb on + strand, within MPMX20_02065at 2159.212 kb on - strand, within MPMX20_02065at 2159.233 kb on + strand, within MPMX20_02065at 2159.289 kb on + strand, within MPMX20_02065at 2159.297 kb on + strand, within MPMX20_02065at 2159.302 kb on + strand, within MPMX20_02065at 2159.338 kb on + strand, within MPMX20_02065at 2159.340 kb on - strand, within MPMX20_02065at 2159.358 kb on + strand, within MPMX20_02065at 2159.361 kb on - strand, within MPMX20_02065at 2159.515 kb on + strand, within MPMX20_02065at 2159.524 kb on - strand, within MPMX20_02065at 2159.532 kb on - strand, within MPMX20_02065at 2159.534 kb on + strand, within MPMX20_02065at 2159.534 kb on + strand, within MPMX20_02065at 2159.534 kb on + strand, within MPMX20_02065at 2159.534 kb on + strand, within MPMX20_02065at 2159.542 kb on - strand, within MPMX20_02065at 2159.542 kb on - strand, within MPMX20_02065at 2159.542 kb on - strand, within MPMX20_02065at 2159.556 kb on + strand, within MPMX20_02065at 2159.597 kb on + strand, within MPMX20_02065at 2159.611 kb on - strand, within MPMX20_02065at 2159.629 kb on + strand, within MPMX20_02065at 2159.706 kb on + strand, within MPMX20_02065at 2159.706 kb on + strand, within MPMX20_02065at 2159.854 kb on - strand, within MPMX20_02065at 2159.882 kb on + strand, within MPMX20_02065at 2159.923 kb on - strand, within MPMX20_02065

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Ethanol (C)
remove
2,157,305 + MPMX20_02063 0.31 -1.8
2,157,353 + MPMX20_02063 0.35 -2.8
2,157,423 - MPMX20_02063 0.40 +0.1
2,157,443 + MPMX20_02063 0.42 -0.3
2,157,451 - MPMX20_02063 0.43 +1.2
2,157,462 + MPMX20_02063 0.44 -3.0
2,157,543 + MPMX20_02063 0.50 -0.9
2,157,590 + MPMX20_02063 0.54 -2.0
2,157,637 + MPMX20_02063 0.58 -0.1
2,157,652 - MPMX20_02063 0.59 +0.9
2,157,717 - MPMX20_02063 0.65 +0.8
2,157,749 + MPMX20_02063 0.67 -2.5
2,157,765 + MPMX20_02063 0.68 -3.4
2,157,765 + MPMX20_02063 0.68 -3.0
2,157,765 + MPMX20_02063 0.68 +0.0
2,157,765 + MPMX20_02063 0.68 -1.1
2,157,770 + MPMX20_02063 0.69 -1.9
2,157,773 - MPMX20_02063 0.69 -3.2
2,157,773 - MPMX20_02063 0.69 +0.8
2,157,773 - MPMX20_02063 0.69 +0.2
2,157,773 - MPMX20_02063 0.69 +0.4
2,157,773 - MPMX20_02063 0.69 -0.7
2,157,773 - MPMX20_02063 0.69 +3.3
2,157,782 - MPMX20_02063 0.70 -1.9
2,157,807 + MPMX20_02063 0.72 -4.1
2,157,815 - MPMX20_02063 0.73 -1.7
2,157,828 - MPMX20_02063 0.74 -4.0
2,157,853 - MPMX20_02063 0.76 -0.7
2,157,955 + MPMX20_02063 0.84 -3.7
2,157,963 - MPMX20_02063 0.85 +0.2
2,157,963 - MPMX20_02063 0.85 -2.0
2,157,991 + MPMX20_02063 0.87 -0.4
2,158,085 + +0.5
2,158,090 + -1.5
2,158,090 + -2.9
2,158,093 - -3.6
2,158,093 - -0.3
2,158,098 - -1.5
2,158,098 - +0.8
2,158,098 - -2.9
2,158,098 - -0.3
2,158,098 - -0.8
2,158,098 - +0.1
2,158,098 - -2.8
2,158,123 + +0.6
2,158,137 + +0.7
2,158,143 + -0.1
2,158,151 - -2.9
2,158,182 + -0.3
2,158,182 + -2.6
2,158,182 + +1.1
2,158,187 + -2.0
2,158,190 - +1.9
2,158,190 - -2.9
2,158,190 - -0.4
2,158,190 - +2.0
2,158,190 - +0.1
2,158,192 + -2.5
2,158,204 + +1.0
2,158,215 - +2.0
2,158,331 + -2.0
2,158,339 - -1.1
2,158,339 - +1.6
2,158,354 + MPMX20_02064 0.11 -1.3
2,158,387 + MPMX20_02064 0.15 -3.0
2,158,395 - MPMX20_02064 0.17 +0.8
2,158,517 + MPMX20_02064 0.34 -0.2
2,158,525 - MPMX20_02064 0.35 -3.9
2,158,525 - MPMX20_02064 0.35 -1.8
2,158,535 - MPMX20_02064 0.37 +0.1
2,158,559 - MPMX20_02064 0.40 -4.2
2,158,609 + MPMX20_02064 0.47 -1.8
2,158,668 + MPMX20_02064 0.56 -0.9
2,158,695 + MPMX20_02064 0.60 -2.0
2,158,797 + MPMX20_02064 0.74 -1.5
2,158,811 - MPMX20_02064 0.76 +0.6
2,158,821 + MPMX20_02064 0.78 -1.6
2,158,879 + MPMX20_02064 0.86 -0.6
2,158,893 + MPMX20_02064 0.88 +1.7
2,158,901 - MPMX20_02064 0.89 -2.3
2,158,901 - MPMX20_02064 0.89 -1.1
2,158,911 - -2.6
2,158,921 - +1.5
2,159,067 + MPMX20_02065 0.12 -2.7
2,159,067 + MPMX20_02065 0.12 -1.1
2,159,212 - MPMX20_02065 0.23 +0.7
2,159,233 + MPMX20_02065 0.25 -2.3
2,159,289 + MPMX20_02065 0.29 +2.2
2,159,297 + MPMX20_02065 0.30 +0.8
2,159,302 + MPMX20_02065 0.30 +2.3
2,159,338 + MPMX20_02065 0.33 +1.7
2,159,340 - MPMX20_02065 0.33 +0.1
2,159,358 + MPMX20_02065 0.34 +0.5
2,159,361 - MPMX20_02065 0.34 -3.9
2,159,515 + MPMX20_02065 0.46 -1.6
2,159,524 - MPMX20_02065 0.47 +1.2
2,159,532 - MPMX20_02065 0.47 +0.5
2,159,534 + MPMX20_02065 0.48 +1.5
2,159,534 + MPMX20_02065 0.48 -0.0
2,159,534 + MPMX20_02065 0.48 -2.6
2,159,534 + MPMX20_02065 0.48 +3.2
2,159,542 - MPMX20_02065 0.48 +0.8
2,159,542 - MPMX20_02065 0.48 +1.9
2,159,542 - MPMX20_02065 0.48 -0.3
2,159,556 + MPMX20_02065 0.49 +0.2
2,159,597 + MPMX20_02065 0.52 +0.4
2,159,611 - MPMX20_02065 0.53 +0.7
2,159,629 + MPMX20_02065 0.55 +0.5
2,159,706 + MPMX20_02065 0.61 +0.5
2,159,706 + MPMX20_02065 0.61 -3.0
2,159,854 - MPMX20_02065 0.72 +0.7
2,159,882 + MPMX20_02065 0.74 +0.1
2,159,923 - MPMX20_02065 0.77 +1.0

Or see this region's nucleotide sequence