Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01126

Experiment: Ethanol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01125 and MPMX20_01126 are separated by 15 nucleotidesMPMX20_01126 and MPMX20_01127 overlap by 8 nucleotides MPMX20_01125: MPMX20_01125 - Putative nucleoside transporter YegT, at 1,184,873 to 1,186,111 _01125 MPMX20_01126: MPMX20_01126 - Inosose dehydratase, at 1,186,127 to 1,187,152 _01126 MPMX20_01127: MPMX20_01127 - Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase, at 1,187,145 to 1,188,287 _01127 Position (kb) 1186 1187 1188Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 1185.157 kb on + strand, within MPMX20_01125at 1185.202 kb on + strand, within MPMX20_01125at 1185.269 kb on + strand, within MPMX20_01125at 1185.399 kb on - strand, within MPMX20_01125at 1185.425 kb on + strand, within MPMX20_01125at 1185.448 kb on + strand, within MPMX20_01125at 1185.496 kb on + strand, within MPMX20_01125at 1185.496 kb on + strand, within MPMX20_01125at 1185.496 kb on + strand, within MPMX20_01125at 1185.504 kb on - strand, within MPMX20_01125at 1185.504 kb on - strand, within MPMX20_01125at 1185.509 kb on - strand, within MPMX20_01125at 1185.528 kb on - strand, within MPMX20_01125at 1185.577 kb on + strand, within MPMX20_01125at 1185.594 kb on - strand, within MPMX20_01125at 1185.610 kb on - strand, within MPMX20_01125at 1185.753 kb on - strand, within MPMX20_01125at 1185.921 kb on - strand, within MPMX20_01125at 1185.921 kb on - strand, within MPMX20_01125at 1185.977 kb on + strand, within MPMX20_01125at 1185.977 kb on + strand, within MPMX20_01125at 1185.977 kb on + strand, within MPMX20_01125at 1185.977 kb on + strand, within MPMX20_01125at 1185.977 kb on + strand, within MPMX20_01125at 1185.977 kb on + strand, within MPMX20_01125at 1185.977 kb on + strand, within MPMX20_01125at 1185.979 kb on + strand, within MPMX20_01125at 1185.979 kb on + strand, within MPMX20_01125at 1185.979 kb on + strand, within MPMX20_01125at 1185.979 kb on + strand, within MPMX20_01125at 1185.979 kb on + strand, within MPMX20_01125at 1185.985 kb on - strand, within MPMX20_01125at 1185.985 kb on - strand, within MPMX20_01125at 1185.985 kb on - strand, within MPMX20_01125at 1185.985 kb on - strand, within MPMX20_01125at 1185.985 kb on - strand, within MPMX20_01125at 1185.985 kb on - strand, within MPMX20_01125at 1185.998 kb on + strandat 1186.015 kb on + strandat 1186.034 kb on - strandat 1186.048 kb on + strandat 1186.129 kb on - strandat 1186.173 kb on + strandat 1186.173 kb on + strandat 1186.173 kb on + strandat 1186.231 kb on + strand, within MPMX20_01126at 1186.239 kb on - strand, within MPMX20_01126at 1186.254 kb on + strand, within MPMX20_01126at 1186.269 kb on + strand, within MPMX20_01126at 1186.297 kb on - strand, within MPMX20_01126at 1186.300 kb on + strand, within MPMX20_01126at 1186.452 kb on + strand, within MPMX20_01126at 1186.590 kb on - strand, within MPMX20_01126at 1186.610 kb on + strand, within MPMX20_01126at 1186.650 kb on + strand, within MPMX20_01126at 1186.650 kb on + strand, within MPMX20_01126at 1186.650 kb on + strand, within MPMX20_01126at 1186.650 kb on + strand, within MPMX20_01126at 1186.658 kb on - strand, within MPMX20_01126at 1186.658 kb on - strand, within MPMX20_01126at 1186.658 kb on - strand, within MPMX20_01126at 1186.658 kb on - strand, within MPMX20_01126at 1186.782 kb on + strand, within MPMX20_01126at 1186.790 kb on - strand, within MPMX20_01126at 1186.885 kb on + strand, within MPMX20_01126at 1186.901 kb on - strand, within MPMX20_01126at 1186.931 kb on + strand, within MPMX20_01126at 1186.931 kb on + strand, within MPMX20_01126at 1187.008 kb on + strand, within MPMX20_01126at 1187.008 kb on + strand, within MPMX20_01126at 1187.008 kb on + strand, within MPMX20_01126at 1187.018 kb on + strand, within MPMX20_01126at 1187.018 kb on + strand, within MPMX20_01126at 1187.018 kb on + strand, within MPMX20_01126at 1187.018 kb on + strand, within MPMX20_01126at 1187.018 kb on + strand, within MPMX20_01126at 1187.018 kb on + strand, within MPMX20_01126at 1187.026 kb on - strand, within MPMX20_01126at 1187.026 kb on - strand, within MPMX20_01126at 1187.026 kb on - strand, within MPMX20_01126at 1187.037 kb on + strand, within MPMX20_01126at 1187.037 kb on + strand, within MPMX20_01126at 1187.037 kb on + strand, within MPMX20_01126at 1187.142 kb on + strandat 1187.150 kb on - strandat 1187.153 kb on + strandat 1187.192 kb on + strandat 1187.200 kb on - strandat 1187.218 kb on + strandat 1187.226 kb on - strandat 1187.233 kb on - strandat 1187.233 kb on - strandat 1187.303 kb on - strand, within MPMX20_01127at 1187.306 kb on + strand, within MPMX20_01127at 1187.324 kb on - strand, within MPMX20_01127at 1187.339 kb on - strand, within MPMX20_01127at 1187.343 kb on + strand, within MPMX20_01127at 1187.343 kb on + strand, within MPMX20_01127at 1187.343 kb on + strand, within MPMX20_01127at 1187.351 kb on - strand, within MPMX20_01127at 1187.351 kb on - strand, within MPMX20_01127at 1187.351 kb on - strand, within MPMX20_01127at 1187.351 kb on - strand, within MPMX20_01127at 1187.351 kb on - strand, within MPMX20_01127at 1187.351 kb on - strand, within MPMX20_01127at 1187.356 kb on + strand, within MPMX20_01127at 1187.376 kb on + strand, within MPMX20_01127at 1187.376 kb on + strand, within MPMX20_01127at 1187.432 kb on + strand, within MPMX20_01127at 1187.432 kb on + strand, within MPMX20_01127at 1187.432 kb on + strand, within MPMX20_01127at 1187.434 kb on + strand, within MPMX20_01127at 1187.440 kb on + strand, within MPMX20_01127at 1187.440 kb on + strand, within MPMX20_01127at 1187.440 kb on - strand, within MPMX20_01127at 1187.440 kb on - strand, within MPMX20_01127at 1187.442 kb on - strand, within MPMX20_01127at 1187.448 kb on - strand, within MPMX20_01127at 1187.480 kb on + strand, within MPMX20_01127at 1187.590 kb on + strand, within MPMX20_01127at 1187.633 kb on - strand, within MPMX20_01127at 1187.696 kb on + strand, within MPMX20_01127at 1187.703 kb on + strand, within MPMX20_01127at 1187.759 kb on + strand, within MPMX20_01127at 1187.759 kb on + strand, within MPMX20_01127at 1187.801 kb on - strand, within MPMX20_01127at 1187.816 kb on - strand, within MPMX20_01127at 1187.865 kb on + strand, within MPMX20_01127at 1187.865 kb on + strand, within MPMX20_01127at 1187.880 kb on + strand, within MPMX20_01127at 1187.915 kb on + strand, within MPMX20_01127at 1187.918 kb on - strand, within MPMX20_01127at 1187.923 kb on - strand, within MPMX20_01127at 1187.923 kb on - strand, within MPMX20_01127at 1188.039 kb on - strand, within MPMX20_01127at 1188.057 kb on - strand, within MPMX20_01127at 1188.064 kb on + strand, within MPMX20_01127at 1188.124 kb on - strand, within MPMX20_01127

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanol (C)
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1,185,157 + MPMX20_01125 0.23 +0.0
1,185,202 + MPMX20_01125 0.27 -0.6
1,185,269 + MPMX20_01125 0.32 -1.4
1,185,399 - MPMX20_01125 0.42 -0.6
1,185,425 + MPMX20_01125 0.45 -0.3
1,185,448 + MPMX20_01125 0.46 +0.8
1,185,496 + MPMX20_01125 0.50 -1.2
1,185,496 + MPMX20_01125 0.50 -0.2
1,185,496 + MPMX20_01125 0.50 -2.5
1,185,504 - MPMX20_01125 0.51 -2.6
1,185,504 - MPMX20_01125 0.51 +0.5
1,185,509 - MPMX20_01125 0.51 -4.0
1,185,528 - MPMX20_01125 0.53 -3.6
1,185,577 + MPMX20_01125 0.57 -0.8
1,185,594 - MPMX20_01125 0.58 +0.5
1,185,610 - MPMX20_01125 0.59 +1.4
1,185,753 - MPMX20_01125 0.71 -2.2
1,185,921 - MPMX20_01125 0.85 +2.4
1,185,921 - MPMX20_01125 0.85 +2.2
1,185,977 + MPMX20_01125 0.89 +0.4
1,185,977 + MPMX20_01125 0.89 -0.2
1,185,977 + MPMX20_01125 0.89 +0.2
1,185,977 + MPMX20_01125 0.89 -2.7
1,185,977 + MPMX20_01125 0.89 +0.2
1,185,977 + MPMX20_01125 0.89 -2.6
1,185,977 + MPMX20_01125 0.89 +0.3
1,185,979 + MPMX20_01125 0.89 +3.4
1,185,979 + MPMX20_01125 0.89 -2.3
1,185,979 + MPMX20_01125 0.89 +0.6
1,185,979 + MPMX20_01125 0.89 -1.4
1,185,979 + MPMX20_01125 0.89 +2.2
1,185,985 - MPMX20_01125 0.90 +1.7
1,185,985 - MPMX20_01125 0.90 +0.8
1,185,985 - MPMX20_01125 0.90 +1.3
1,185,985 - MPMX20_01125 0.90 -0.4
1,185,985 - MPMX20_01125 0.90 +1.2
1,185,985 - MPMX20_01125 0.90 +1.0
1,185,998 + +1.9
1,186,015 + +1.0
1,186,034 - -0.2
1,186,048 + -3.3
1,186,129 - -0.7
1,186,173 + +1.2
1,186,173 + +0.7
1,186,173 + -4.1
1,186,231 + MPMX20_01126 0.10 +1.1
1,186,239 - MPMX20_01126 0.11 -1.7
1,186,254 + MPMX20_01126 0.12 +1.5
1,186,269 + MPMX20_01126 0.14 +0.9
1,186,297 - MPMX20_01126 0.17 +0.7
1,186,300 + MPMX20_01126 0.17 -0.6
1,186,452 + MPMX20_01126 0.32 +0.6
1,186,590 - MPMX20_01126 0.45 +3.2
1,186,610 + MPMX20_01126 0.47 -2.2
1,186,650 + MPMX20_01126 0.51 -0.5
1,186,650 + MPMX20_01126 0.51 +1.1
1,186,650 + MPMX20_01126 0.51 -1.8
1,186,650 + MPMX20_01126 0.51 -3.6
1,186,658 - MPMX20_01126 0.52 -0.6
1,186,658 - MPMX20_01126 0.52 -2.7
1,186,658 - MPMX20_01126 0.52 -0.8
1,186,658 - MPMX20_01126 0.52 +0.9
1,186,782 + MPMX20_01126 0.64 +1.5
1,186,790 - MPMX20_01126 0.65 +2.0
1,186,885 + MPMX20_01126 0.74 +2.3
1,186,901 - MPMX20_01126 0.75 -0.1
1,186,931 + MPMX20_01126 0.78 +1.6
1,186,931 + MPMX20_01126 0.78 +2.4
1,187,008 + MPMX20_01126 0.86 -3.9
1,187,008 + MPMX20_01126 0.86 -2.5
1,187,008 + MPMX20_01126 0.86 +0.5
1,187,018 + MPMX20_01126 0.87 -1.8
1,187,018 + MPMX20_01126 0.87 -3.0
1,187,018 + MPMX20_01126 0.87 -3.0
1,187,018 + MPMX20_01126 0.87 -2.2
1,187,018 + MPMX20_01126 0.87 +0.5
1,187,018 + MPMX20_01126 0.87 -3.3
1,187,026 - MPMX20_01126 0.88 +0.8
1,187,026 - MPMX20_01126 0.88 -1.9
1,187,026 - MPMX20_01126 0.88 +1.0
1,187,037 + MPMX20_01126 0.89 +0.0
1,187,037 + MPMX20_01126 0.89 +0.3
1,187,037 + MPMX20_01126 0.89 +1.3
1,187,142 + +0.8
1,187,150 - -1.4
1,187,153 + +0.7
1,187,192 + +0.4
1,187,200 - -0.4
1,187,218 + -1.7
1,187,226 - +2.4
1,187,233 - -1.4
1,187,233 - -2.5
1,187,303 - MPMX20_01127 0.14 -2.4
1,187,306 + MPMX20_01127 0.14 +0.7
1,187,324 - MPMX20_01127 0.16 +0.6
1,187,339 - MPMX20_01127 0.17 -1.3
1,187,343 + MPMX20_01127 0.17 +1.3
1,187,343 + MPMX20_01127 0.17 -1.2
1,187,343 + MPMX20_01127 0.17 -2.7
1,187,351 - MPMX20_01127 0.18 -2.1
1,187,351 - MPMX20_01127 0.18 -0.3
1,187,351 - MPMX20_01127 0.18 -3.8
1,187,351 - MPMX20_01127 0.18 -0.2
1,187,351 - MPMX20_01127 0.18 +0.2
1,187,351 - MPMX20_01127 0.18 -0.8
1,187,356 + MPMX20_01127 0.18 +0.3
1,187,376 + MPMX20_01127 0.20 -0.8
1,187,376 + MPMX20_01127 0.20 +0.2
1,187,432 + MPMX20_01127 0.25 +4.4
1,187,432 + MPMX20_01127 0.25 -3.6
1,187,432 + MPMX20_01127 0.25 +1.8
1,187,434 + MPMX20_01127 0.25 -0.2
1,187,440 + MPMX20_01127 0.26 +1.0
1,187,440 + MPMX20_01127 0.26 +1.4
1,187,440 - MPMX20_01127 0.26 -0.2
1,187,440 - MPMX20_01127 0.26 +0.5
1,187,442 - MPMX20_01127 0.26 -0.9
1,187,448 - MPMX20_01127 0.27 -1.5
1,187,480 + MPMX20_01127 0.29 +2.0
1,187,590 + MPMX20_01127 0.39 -1.6
1,187,633 - MPMX20_01127 0.43 -1.4
1,187,696 + MPMX20_01127 0.48 -3.3
1,187,703 + MPMX20_01127 0.49 -0.4
1,187,759 + MPMX20_01127 0.54 -0.0
1,187,759 + MPMX20_01127 0.54 +0.9
1,187,801 - MPMX20_01127 0.57 -0.6
1,187,816 - MPMX20_01127 0.59 -0.7
1,187,865 + MPMX20_01127 0.63 -1.1
1,187,865 + MPMX20_01127 0.63 +1.5
1,187,880 + MPMX20_01127 0.64 +1.3
1,187,915 + MPMX20_01127 0.67 +0.4
1,187,918 - MPMX20_01127 0.68 -0.6
1,187,923 - MPMX20_01127 0.68 -2.7
1,187,923 - MPMX20_01127 0.68 -2.4
1,188,039 - MPMX20_01127 0.78 -2.2
1,188,057 - MPMX20_01127 0.80 +0.2
1,188,064 + MPMX20_01127 0.80 -0.3
1,188,124 - MPMX20_01127 0.86 -3.7

Or see this region's nucleotide sequence