Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01123 and MPMX20_01124 overlap by 1 nucleotides MPMX20_01124 and MPMX20_01125 are separated by 83 nucleotides MPMX20_01125 and MPMX20_01126 are separated by 15 nucleotides
MPMX20_01123: MPMX20_01123 - Phenylalanine-specific permease, at 1,183,300 to 1,184,688
_01123
MPMX20_01124: MPMX20_01124 - hypothetical protein, at 1,184,688 to 1,184,789
_01124
MPMX20_01125: MPMX20_01125 - Putative nucleoside transporter YegT, at 1,184,873 to 1,186,111
_01125
MPMX20_01126: MPMX20_01126 - Inosose dehydratase, at 1,186,127 to 1,187,152
_01126
Position (kb)
1184
1185
1186
1187 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 1183.940 kb on + strand, within MPMX20_01123 at 1183.940 kb on + strand, within MPMX20_01123 at 1183.982 kb on + strand, within MPMX20_01123 at 1183.982 kb on + strand, within MPMX20_01123 at 1184.049 kb on + strand, within MPMX20_01123 at 1184.059 kb on - strand, within MPMX20_01123 at 1184.066 kb on + strand, within MPMX20_01123 at 1184.076 kb on + strand, within MPMX20_01123 at 1184.084 kb on - strand, within MPMX20_01123 at 1184.110 kb on + strand, within MPMX20_01123 at 1184.120 kb on - strand, within MPMX20_01123 at 1184.194 kb on + strand, within MPMX20_01123 at 1184.194 kb on + strand, within MPMX20_01123 at 1184.207 kb on - strand, within MPMX20_01123 at 1184.238 kb on - strand, within MPMX20_01123 at 1184.240 kb on - strand, within MPMX20_01123 at 1184.267 kb on + strand, within MPMX20_01123 at 1184.286 kb on + strand, within MPMX20_01123 at 1184.402 kb on - strand, within MPMX20_01123 at 1184.426 kb on + strand, within MPMX20_01123 at 1184.456 kb on + strand, within MPMX20_01123 at 1184.523 kb on + strand, within MPMX20_01123 at 1184.531 kb on - strand, within MPMX20_01123 at 1184.543 kb on - strand, within MPMX20_01123 at 1184.592 kb on + strand at 1184.592 kb on + strand at 1184.600 kb on - strand at 1184.610 kb on - strand at 1184.689 kb on - strand at 1184.716 kb on + strand, within MPMX20_01124 at 1184.876 kb on - strand at 1185.001 kb on - strand, within MPMX20_01125 at 1185.005 kb on + strand, within MPMX20_01125 at 1185.006 kb on - strand, within MPMX20_01125 at 1185.122 kb on - strand, within MPMX20_01125 at 1185.157 kb on + strand, within MPMX20_01125 at 1185.202 kb on + strand, within MPMX20_01125 at 1185.269 kb on + strand, within MPMX20_01125 at 1185.399 kb on - strand, within MPMX20_01125 at 1185.425 kb on + strand, within MPMX20_01125 at 1185.448 kb on + strand, within MPMX20_01125 at 1185.496 kb on + strand, within MPMX20_01125 at 1185.496 kb on + strand, within MPMX20_01125 at 1185.496 kb on + strand, within MPMX20_01125 at 1185.504 kb on - strand, within MPMX20_01125 at 1185.504 kb on - strand, within MPMX20_01125 at 1185.509 kb on - strand, within MPMX20_01125 at 1185.528 kb on - strand, within MPMX20_01125 at 1185.577 kb on + strand, within MPMX20_01125 at 1185.594 kb on - strand, within MPMX20_01125 at 1185.610 kb on - strand, within MPMX20_01125 at 1185.753 kb on - strand, within MPMX20_01125 at 1185.921 kb on - strand, within MPMX20_01125 at 1185.921 kb on - strand, within MPMX20_01125 at 1185.977 kb on + strand, within MPMX20_01125 at 1185.977 kb on + strand, within MPMX20_01125 at 1185.977 kb on + strand, within MPMX20_01125 at 1185.977 kb on + strand, within MPMX20_01125 at 1185.977 kb on + strand, within MPMX20_01125 at 1185.977 kb on + strand, within MPMX20_01125 at 1185.977 kb on + strand, within MPMX20_01125 at 1185.979 kb on + strand, within MPMX20_01125 at 1185.979 kb on + strand, within MPMX20_01125 at 1185.979 kb on + strand, within MPMX20_01125 at 1185.979 kb on + strand, within MPMX20_01125 at 1185.979 kb on + strand, within MPMX20_01125 at 1185.985 kb on - strand, within MPMX20_01125 at 1185.985 kb on - strand, within MPMX20_01125 at 1185.985 kb on - strand, within MPMX20_01125 at 1185.985 kb on - strand, within MPMX20_01125 at 1185.985 kb on - strand, within MPMX20_01125 at 1185.985 kb on - strand, within MPMX20_01125 at 1185.998 kb on + strand at 1186.015 kb on + strand at 1186.034 kb on - strand at 1186.048 kb on + strand at 1186.129 kb on - strand at 1186.173 kb on + strand at 1186.173 kb on + strand at 1186.173 kb on + strand at 1186.231 kb on + strand, within MPMX20_01126 at 1186.239 kb on - strand, within MPMX20_01126 at 1186.254 kb on + strand, within MPMX20_01126 at 1186.269 kb on + strand, within MPMX20_01126 at 1186.297 kb on - strand, within MPMX20_01126 at 1186.300 kb on + strand, within MPMX20_01126 at 1186.452 kb on + strand, within MPMX20_01126 at 1186.590 kb on - strand, within MPMX20_01126 at 1186.610 kb on + strand, within MPMX20_01126 at 1186.650 kb on + strand, within MPMX20_01126 at 1186.650 kb on + strand, within MPMX20_01126 at 1186.650 kb on + strand, within MPMX20_01126 at 1186.650 kb on + strand, within MPMX20_01126 at 1186.658 kb on - strand, within MPMX20_01126 at 1186.658 kb on - strand, within MPMX20_01126 at 1186.658 kb on - strand, within MPMX20_01126 at 1186.658 kb on - strand, within MPMX20_01126 at 1186.782 kb on + strand, within MPMX20_01126 at 1186.790 kb on - strand, within MPMX20_01126 at 1186.885 kb on + strand, within MPMX20_01126 at 1186.901 kb on - strand, within MPMX20_01126 at 1186.931 kb on + strand, within MPMX20_01126 at 1186.931 kb on + strand, within MPMX20_01126 at 1187.008 kb on + strand, within MPMX20_01126 at 1187.008 kb on + strand, within MPMX20_01126 at 1187.008 kb on + strand, within MPMX20_01126 at 1187.018 kb on + strand, within MPMX20_01126 at 1187.018 kb on + strand, within MPMX20_01126 at 1187.018 kb on + strand, within MPMX20_01126 at 1187.018 kb on + strand, within MPMX20_01126 at 1187.018 kb on + strand, within MPMX20_01126 at 1187.018 kb on + strand, within MPMX20_01126 at 1187.026 kb on - strand, within MPMX20_01126 at 1187.026 kb on - strand, within MPMX20_01126 at 1187.026 kb on - strand, within MPMX20_01126 at 1187.037 kb on + strand, within MPMX20_01126 at 1187.037 kb on + strand, within MPMX20_01126 at 1187.037 kb on + strand, within MPMX20_01126
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 1,183,940 + MPMX20_01123 0.46 -2.9 1,183,940 + MPMX20_01123 0.46 -1.3 1,183,982 + MPMX20_01123 0.49 +1.1 1,183,982 + MPMX20_01123 0.49 -1.1 1,184,049 + MPMX20_01123 0.54 -0.2 1,184,059 - MPMX20_01123 0.55 +0.8 1,184,066 + MPMX20_01123 0.55 -2.7 1,184,076 + MPMX20_01123 0.56 -1.1 1,184,084 - MPMX20_01123 0.56 -0.4 1,184,110 + MPMX20_01123 0.58 +0.4 1,184,120 - MPMX20_01123 0.59 -1.2 1,184,194 + MPMX20_01123 0.64 -1.0 1,184,194 + MPMX20_01123 0.64 -1.1 1,184,207 - MPMX20_01123 0.65 -3.1 1,184,238 - MPMX20_01123 0.68 -3.8 1,184,240 - MPMX20_01123 0.68 -2.3 1,184,267 + MPMX20_01123 0.70 -4.0 1,184,286 + MPMX20_01123 0.71 -0.8 1,184,402 - MPMX20_01123 0.79 +1.5 1,184,426 + MPMX20_01123 0.81 +1.9 1,184,456 + MPMX20_01123 0.83 +0.7 1,184,523 + MPMX20_01123 0.88 -1.3 1,184,531 - MPMX20_01123 0.89 -0.8 1,184,543 - MPMX20_01123 0.89 -0.3 1,184,592 + -0.0 1,184,592 + +2.5 1,184,600 - +1.4 1,184,610 - +2.7 1,184,689 - +1.4 1,184,716 + MPMX20_01124 0.27 +5.0 1,184,876 - -1.5 1,185,001 - MPMX20_01125 0.10 +0.9 1,185,005 + MPMX20_01125 0.11 +1.5 1,185,006 - MPMX20_01125 0.11 +0.4 1,185,122 - MPMX20_01125 0.20 -3.7 1,185,157 + MPMX20_01125 0.23 +0.0 1,185,202 + MPMX20_01125 0.27 -0.6 1,185,269 + MPMX20_01125 0.32 -1.4 1,185,399 - MPMX20_01125 0.42 -0.6 1,185,425 + MPMX20_01125 0.45 -0.3 1,185,448 + MPMX20_01125 0.46 +0.8 1,185,496 + MPMX20_01125 0.50 -1.2 1,185,496 + MPMX20_01125 0.50 -0.2 1,185,496 + MPMX20_01125 0.50 -2.5 1,185,504 - MPMX20_01125 0.51 -2.6 1,185,504 - MPMX20_01125 0.51 +0.5 1,185,509 - MPMX20_01125 0.51 -4.0 1,185,528 - MPMX20_01125 0.53 -3.6 1,185,577 + MPMX20_01125 0.57 -0.8 1,185,594 - MPMX20_01125 0.58 +0.5 1,185,610 - MPMX20_01125 0.59 +1.4 1,185,753 - MPMX20_01125 0.71 -2.2 1,185,921 - MPMX20_01125 0.85 +2.4 1,185,921 - MPMX20_01125 0.85 +2.2 1,185,977 + MPMX20_01125 0.89 +0.4 1,185,977 + MPMX20_01125 0.89 -0.2 1,185,977 + MPMX20_01125 0.89 +0.2 1,185,977 + MPMX20_01125 0.89 -2.7 1,185,977 + MPMX20_01125 0.89 +0.2 1,185,977 + MPMX20_01125 0.89 -2.6 1,185,977 + MPMX20_01125 0.89 +0.3 1,185,979 + MPMX20_01125 0.89 +3.4 1,185,979 + MPMX20_01125 0.89 -2.3 1,185,979 + MPMX20_01125 0.89 +0.6 1,185,979 + MPMX20_01125 0.89 -1.4 1,185,979 + MPMX20_01125 0.89 +2.2 1,185,985 - MPMX20_01125 0.90 +1.7 1,185,985 - MPMX20_01125 0.90 +0.8 1,185,985 - MPMX20_01125 0.90 +1.3 1,185,985 - MPMX20_01125 0.90 -0.4 1,185,985 - MPMX20_01125 0.90 +1.2 1,185,985 - MPMX20_01125 0.90 +1.0 1,185,998 + +1.9 1,186,015 + +1.0 1,186,034 - -0.2 1,186,048 + -3.3 1,186,129 - -0.7 1,186,173 + +1.2 1,186,173 + +0.7 1,186,173 + -4.1 1,186,231 + MPMX20_01126 0.10 +1.1 1,186,239 - MPMX20_01126 0.11 -1.7 1,186,254 + MPMX20_01126 0.12 +1.5 1,186,269 + MPMX20_01126 0.14 +0.9 1,186,297 - MPMX20_01126 0.17 +0.7 1,186,300 + MPMX20_01126 0.17 -0.6 1,186,452 + MPMX20_01126 0.32 +0.6 1,186,590 - MPMX20_01126 0.45 +3.2 1,186,610 + MPMX20_01126 0.47 -2.2 1,186,650 + MPMX20_01126 0.51 -0.5 1,186,650 + MPMX20_01126 0.51 +1.1 1,186,650 + MPMX20_01126 0.51 -1.8 1,186,650 + MPMX20_01126 0.51 -3.6 1,186,658 - MPMX20_01126 0.52 -0.6 1,186,658 - MPMX20_01126 0.52 -2.7 1,186,658 - MPMX20_01126 0.52 -0.8 1,186,658 - MPMX20_01126 0.52 +0.9 1,186,782 + MPMX20_01126 0.64 +1.5 1,186,790 - MPMX20_01126 0.65 +2.0 1,186,885 + MPMX20_01126 0.74 +2.3 1,186,901 - MPMX20_01126 0.75 -0.1 1,186,931 + MPMX20_01126 0.78 +1.6 1,186,931 + MPMX20_01126 0.78 +2.4 1,187,008 + MPMX20_01126 0.86 -3.9 1,187,008 + MPMX20_01126 0.86 -2.5 1,187,008 + MPMX20_01126 0.86 +0.5 1,187,018 + MPMX20_01126 0.87 -1.8 1,187,018 + MPMX20_01126 0.87 -3.0 1,187,018 + MPMX20_01126 0.87 -3.0 1,187,018 + MPMX20_01126 0.87 -2.2 1,187,018 + MPMX20_01126 0.87 +0.5 1,187,018 + MPMX20_01126 0.87 -3.3 1,187,026 - MPMX20_01126 0.88 +0.8 1,187,026 - MPMX20_01126 0.88 -1.9 1,187,026 - MPMX20_01126 0.88 +1.0 1,187,037 + MPMX20_01126 0.89 +0.0 1,187,037 + MPMX20_01126 0.89 +0.3 1,187,037 + MPMX20_01126 0.89 +1.3
Or see this region's nucleotide sequence