Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04591

Experiment: oxalate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04590 and MPMX20_04591 are separated by 45 nucleotidesMPMX20_04591 and MPMX20_04592 are separated by 43 nucleotides MPMX20_04590: MPMX20_04590 - Sulfoquinovosidase, at 4,801,214 to 4,803,238 _04590 MPMX20_04591: MPMX20_04591 - Putative 2,3-dihydroxypropane-1-sulfonate exporter, at 4,803,284 to 4,804,666 _04591 MPMX20_04592: MPMX20_04592 - Putative 2,3-dihydroxypropane-1-sulfonate exporter, at 4,804,710 to 4,806,134 _04592 Position (kb) 4803 4804 4805Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 4802.306 kb on + strand, within MPMX20_04590at 4802.322 kb on + strand, within MPMX20_04590at 4802.345 kb on + strand, within MPMX20_04590at 4802.353 kb on - strand, within MPMX20_04590at 4802.385 kb on - strand, within MPMX20_04590at 4802.395 kb on - strand, within MPMX20_04590at 4802.435 kb on + strand, within MPMX20_04590at 4802.447 kb on - strand, within MPMX20_04590at 4802.482 kb on + strand, within MPMX20_04590at 4802.482 kb on + strand, within MPMX20_04590at 4802.482 kb on + strand, within MPMX20_04590at 4802.482 kb on + strand, within MPMX20_04590at 4802.490 kb on - strand, within MPMX20_04590at 4802.490 kb on - strand, within MPMX20_04590at 4802.490 kb on - strand, within MPMX20_04590at 4802.557 kb on - strand, within MPMX20_04590at 4802.557 kb on - strand, within MPMX20_04590at 4802.597 kb on + strand, within MPMX20_04590at 4802.785 kb on - strand, within MPMX20_04590at 4802.795 kb on - strand, within MPMX20_04590at 4802.797 kb on + strand, within MPMX20_04590at 4802.916 kb on - strand, within MPMX20_04590at 4803.085 kb on + strandat 4803.085 kb on + strandat 4803.093 kb on - strandat 4803.093 kb on - strandat 4803.130 kb on - strandat 4803.130 kb on - strandat 4803.209 kb on + strandat 4803.214 kb on + strandat 4803.222 kb on + strandat 4803.222 kb on - strandat 4803.222 kb on - strandat 4803.406 kb on + strandat 4803.428 kb on - strand, within MPMX20_04591at 4803.428 kb on - strand, within MPMX20_04591at 4803.428 kb on - strand, within MPMX20_04591at 4803.433 kb on - strand, within MPMX20_04591at 4803.438 kb on - strand, within MPMX20_04591at 4803.438 kb on - strand, within MPMX20_04591at 4803.493 kb on + strand, within MPMX20_04591at 4803.526 kb on + strand, within MPMX20_04591at 4803.584 kb on + strand, within MPMX20_04591at 4803.584 kb on + strand, within MPMX20_04591at 4803.584 kb on + strand, within MPMX20_04591at 4803.681 kb on - strand, within MPMX20_04591at 4803.702 kb on - strand, within MPMX20_04591at 4803.774 kb on - strand, within MPMX20_04591at 4803.790 kb on + strand, within MPMX20_04591at 4803.790 kb on + strand, within MPMX20_04591at 4803.790 kb on + strand, within MPMX20_04591at 4803.790 kb on + strand, within MPMX20_04591at 4803.798 kb on - strand, within MPMX20_04591at 4803.798 kb on - strand, within MPMX20_04591at 4803.798 kb on - strand, within MPMX20_04591at 4803.798 kb on - strand, within MPMX20_04591at 4803.798 kb on - strand, within MPMX20_04591at 4803.798 kb on - strand, within MPMX20_04591at 4803.798 kb on - strand, within MPMX20_04591at 4803.834 kb on + strand, within MPMX20_04591at 4803.878 kb on - strand, within MPMX20_04591at 4803.889 kb on + strand, within MPMX20_04591at 4803.921 kb on - strand, within MPMX20_04591at 4803.922 kb on - strand, within MPMX20_04591at 4804.026 kb on + strand, within MPMX20_04591at 4804.026 kb on + strand, within MPMX20_04591at 4804.044 kb on - strand, within MPMX20_04591at 4804.104 kb on + strand, within MPMX20_04591at 4804.112 kb on - strand, within MPMX20_04591at 4804.117 kb on + strand, within MPMX20_04591at 4804.204 kb on + strand, within MPMX20_04591at 4804.303 kb on - strand, within MPMX20_04591at 4804.310 kb on + strand, within MPMX20_04591at 4804.328 kb on + strand, within MPMX20_04591at 4804.329 kb on + strand, within MPMX20_04591at 4804.333 kb on + strand, within MPMX20_04591at 4804.338 kb on + strand, within MPMX20_04591at 4804.383 kb on - strand, within MPMX20_04591at 4804.420 kb on - strand, within MPMX20_04591at 4804.441 kb on + strand, within MPMX20_04591at 4804.492 kb on + strand, within MPMX20_04591at 4804.593 kb on + strandat 4804.616 kb on - strandat 4804.729 kb on + strandat 4804.737 kb on - strandat 4804.749 kb on - strandat 4804.749 kb on - strandat 4804.794 kb on - strandat 4804.804 kb on + strandat 4804.837 kb on - strandat 4804.845 kb on - strandat 4804.855 kb on - strand, within MPMX20_04592at 4804.887 kb on + strand, within MPMX20_04592at 4804.990 kb on + strand, within MPMX20_04592at 4805.007 kb on - strand, within MPMX20_04592at 4805.070 kb on + strand, within MPMX20_04592at 4805.098 kb on + strand, within MPMX20_04592at 4805.106 kb on + strand, within MPMX20_04592at 4805.106 kb on - strand, within MPMX20_04592at 4805.106 kb on - strand, within MPMX20_04592at 4805.106 kb on - strand, within MPMX20_04592at 4805.106 kb on - strand, within MPMX20_04592at 4805.106 kb on - strand, within MPMX20_04592at 4805.140 kb on - strand, within MPMX20_04592at 4805.200 kb on + strand, within MPMX20_04592at 4805.213 kb on + strand, within MPMX20_04592at 4805.213 kb on + strand, within MPMX20_04592at 4805.214 kb on - strand, within MPMX20_04592at 4805.221 kb on - strand, within MPMX20_04592at 4805.221 kb on - strand, within MPMX20_04592at 4805.280 kb on - strand, within MPMX20_04592at 4805.294 kb on - strand, within MPMX20_04592at 4805.312 kb on + strand, within MPMX20_04592at 4805.320 kb on - strand, within MPMX20_04592at 4805.325 kb on + strand, within MPMX20_04592at 4805.338 kb on - strand, within MPMX20_04592at 4805.346 kb on - strand, within MPMX20_04592at 4805.346 kb on - strand, within MPMX20_04592at 4805.348 kb on - strand, within MPMX20_04592at 4805.368 kb on - strand, within MPMX20_04592at 4805.368 kb on - strand, within MPMX20_04592at 4805.375 kb on + strand, within MPMX20_04592at 4805.391 kb on + strand, within MPMX20_04592at 4805.446 kb on - strand, within MPMX20_04592at 4805.450 kb on + strand, within MPMX20_04592at 4805.450 kb on + strand, within MPMX20_04592at 4805.450 kb on + strand, within MPMX20_04592at 4805.451 kb on - strand, within MPMX20_04592at 4805.458 kb on - strand, within MPMX20_04592at 4805.458 kb on - strand, within MPMX20_04592at 4805.497 kb on + strand, within MPMX20_04592at 4805.497 kb on + strand, within MPMX20_04592at 4805.500 kb on - strand, within MPMX20_04592at 4805.505 kb on - strand, within MPMX20_04592at 4805.598 kb on + strand, within MPMX20_04592at 4805.606 kb on - strand, within MPMX20_04592at 4805.606 kb on - strand, within MPMX20_04592at 4805.606 kb on - strand, within MPMX20_04592at 4805.622 kb on + strand, within MPMX20_04592at 4805.626 kb on + strand, within MPMX20_04592at 4805.657 kb on - strand, within MPMX20_04592

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Per-strain Table

Position Strand Gene LocusTag Fraction oxalate (C)
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4,802,306 + MPMX20_04590 0.54 -2.3
4,802,322 + MPMX20_04590 0.55 +0.8
4,802,345 + MPMX20_04590 0.56 +0.5
4,802,353 - MPMX20_04590 0.56 +0.3
4,802,385 - MPMX20_04590 0.58 -0.2
4,802,395 - MPMX20_04590 0.58 +0.2
4,802,435 + MPMX20_04590 0.60 -3.2
4,802,447 - MPMX20_04590 0.61 +0.5
4,802,482 + MPMX20_04590 0.63 -2.5
4,802,482 + MPMX20_04590 0.63 +0.6
4,802,482 + MPMX20_04590 0.63 +0.1
4,802,482 + MPMX20_04590 0.63 -1.1
4,802,490 - MPMX20_04590 0.63 -3.0
4,802,490 - MPMX20_04590 0.63 +0.8
4,802,490 - MPMX20_04590 0.63 +1.6
4,802,557 - MPMX20_04590 0.66 +1.1
4,802,557 - MPMX20_04590 0.66 +4.1
4,802,597 + MPMX20_04590 0.68 -0.3
4,802,785 - MPMX20_04590 0.78 -0.0
4,802,795 - MPMX20_04590 0.78 -1.4
4,802,797 + MPMX20_04590 0.78 -1.5
4,802,916 - MPMX20_04590 0.84 +0.2
4,803,085 + +1.4
4,803,085 + +0.9
4,803,093 - +1.5
4,803,093 - +0.2
4,803,130 - -2.9
4,803,130 - +0.7
4,803,209 + -3.1
4,803,214 + +0.1
4,803,222 + -3.8
4,803,222 - +0.9
4,803,222 - +0.7
4,803,406 + +0.5
4,803,428 - MPMX20_04591 0.10 +0.6
4,803,428 - MPMX20_04591 0.10 -2.5
4,803,428 - MPMX20_04591 0.10 +1.0
4,803,433 - MPMX20_04591 0.11 -2.1
4,803,438 - MPMX20_04591 0.11 +1.5
4,803,438 - MPMX20_04591 0.11 +1.9
4,803,493 + MPMX20_04591 0.15 +0.9
4,803,526 + MPMX20_04591 0.17 +0.1
4,803,584 + MPMX20_04591 0.22 -2.6
4,803,584 + MPMX20_04591 0.22 -2.1
4,803,584 + MPMX20_04591 0.22 +0.6
4,803,681 - MPMX20_04591 0.29 +0.7
4,803,702 - MPMX20_04591 0.30 +1.1
4,803,774 - MPMX20_04591 0.35 +0.7
4,803,790 + MPMX20_04591 0.37 -4.0
4,803,790 + MPMX20_04591 0.37 -3.2
4,803,790 + MPMX20_04591 0.37 +1.4
4,803,790 + MPMX20_04591 0.37 -0.2
4,803,798 - MPMX20_04591 0.37 -0.3
4,803,798 - MPMX20_04591 0.37 -1.5
4,803,798 - MPMX20_04591 0.37 -2.9
4,803,798 - MPMX20_04591 0.37 -0.4
4,803,798 - MPMX20_04591 0.37 -0.8
4,803,798 - MPMX20_04591 0.37 -0.2
4,803,798 - MPMX20_04591 0.37 +1.5
4,803,834 + MPMX20_04591 0.40 +0.1
4,803,878 - MPMX20_04591 0.43 -0.2
4,803,889 + MPMX20_04591 0.44 +2.0
4,803,921 - MPMX20_04591 0.46 +1.1
4,803,922 - MPMX20_04591 0.46 -0.7
4,804,026 + MPMX20_04591 0.54 -2.0
4,804,026 + MPMX20_04591 0.54 -0.2
4,804,044 - MPMX20_04591 0.55 -0.4
4,804,104 + MPMX20_04591 0.59 +0.9
4,804,112 - MPMX20_04591 0.60 -3.9
4,804,117 + MPMX20_04591 0.60 -0.0
4,804,204 + MPMX20_04591 0.67 -0.2
4,804,303 - MPMX20_04591 0.74 -0.1
4,804,310 + MPMX20_04591 0.74 -0.5
4,804,328 + MPMX20_04591 0.75 +1.3
4,804,329 + MPMX20_04591 0.76 +0.9
4,804,333 + MPMX20_04591 0.76 +0.6
4,804,338 + MPMX20_04591 0.76 +1.3
4,804,383 - MPMX20_04591 0.79 -1.2
4,804,420 - MPMX20_04591 0.82 +3.1
4,804,441 + MPMX20_04591 0.84 +0.4
4,804,492 + MPMX20_04591 0.87 +1.0
4,804,593 + -1.4
4,804,616 - -1.1
4,804,729 + +0.2
4,804,737 - +0.9
4,804,749 - +1.8
4,804,749 - +0.8
4,804,794 - +2.0
4,804,804 + +2.1
4,804,837 - -2.1
4,804,845 - +0.5
4,804,855 - MPMX20_04592 0.10 -1.6
4,804,887 + MPMX20_04592 0.12 -1.1
4,804,990 + MPMX20_04592 0.20 -0.9
4,805,007 - MPMX20_04592 0.21 +1.1
4,805,070 + MPMX20_04592 0.25 -1.8
4,805,098 + MPMX20_04592 0.27 +0.6
4,805,106 + MPMX20_04592 0.28 +1.9
4,805,106 - MPMX20_04592 0.28 -2.9
4,805,106 - MPMX20_04592 0.28 -0.3
4,805,106 - MPMX20_04592 0.28 -2.3
4,805,106 - MPMX20_04592 0.28 -0.5
4,805,106 - MPMX20_04592 0.28 +0.5
4,805,140 - MPMX20_04592 0.30 -0.6
4,805,200 + MPMX20_04592 0.34 +0.7
4,805,213 + MPMX20_04592 0.35 +0.1
4,805,213 + MPMX20_04592 0.35 +0.8
4,805,214 - MPMX20_04592 0.35 +1.0
4,805,221 - MPMX20_04592 0.36 +1.9
4,805,221 - MPMX20_04592 0.36 -0.6
4,805,280 - MPMX20_04592 0.40 -3.1
4,805,294 - MPMX20_04592 0.41 -0.0
4,805,312 + MPMX20_04592 0.42 -0.6
4,805,320 - MPMX20_04592 0.43 -0.8
4,805,325 + MPMX20_04592 0.43 +4.6
4,805,338 - MPMX20_04592 0.44 +1.1
4,805,346 - MPMX20_04592 0.45 +0.1
4,805,346 - MPMX20_04592 0.45 +0.7
4,805,348 - MPMX20_04592 0.45 +3.0
4,805,368 - MPMX20_04592 0.46 -4.0
4,805,368 - MPMX20_04592 0.46 -0.0
4,805,375 + MPMX20_04592 0.47 -1.6
4,805,391 + MPMX20_04592 0.48 -2.3
4,805,446 - MPMX20_04592 0.52 -0.4
4,805,450 + MPMX20_04592 0.52 +0.6
4,805,450 + MPMX20_04592 0.52 +0.6
4,805,450 + MPMX20_04592 0.52 +0.9
4,805,451 - MPMX20_04592 0.52 +2.4
4,805,458 - MPMX20_04592 0.52 -2.7
4,805,458 - MPMX20_04592 0.52 +4.1
4,805,497 + MPMX20_04592 0.55 -0.1
4,805,497 + MPMX20_04592 0.55 +2.0
4,805,500 - MPMX20_04592 0.55 +0.8
4,805,505 - MPMX20_04592 0.56 +0.2
4,805,598 + MPMX20_04592 0.62 +1.6
4,805,606 - MPMX20_04592 0.63 -3.2
4,805,606 - MPMX20_04592 0.63 -1.0
4,805,606 - MPMX20_04592 0.63 +1.2
4,805,622 + MPMX20_04592 0.64 -0.4
4,805,626 + MPMX20_04592 0.64 -1.6
4,805,657 - MPMX20_04592 0.66 -3.0

Or see this region's nucleotide sequence