Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00762

Experiment: oxalate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00761 and MPMX20_00762 overlap by 25 nucleotidesMPMX20_00762 and MPMX20_00763 are separated by 168 nucleotides MPMX20_00761: MPMX20_00761 - hypothetical protein, at 791,750 to 793,360 _00761 MPMX20_00762: MPMX20_00762 - Thiamine-binding periplasmic protein, at 793,336 to 794,319 _00762 MPMX20_00763: MPMX20_00763 - HTH-type transcriptional regulator SgrR, at 794,488 to 796,143 _00763 Position (kb) 793 794 795Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 792.402 kb on - strand, within MPMX20_00761at 792.423 kb on - strand, within MPMX20_00761at 792.474 kb on - strand, within MPMX20_00761at 792.485 kb on - strand, within MPMX20_00761at 792.487 kb on + strand, within MPMX20_00761at 792.507 kb on + strand, within MPMX20_00761at 792.512 kb on + strand, within MPMX20_00761at 792.581 kb on + strand, within MPMX20_00761at 792.586 kb on + strand, within MPMX20_00761at 792.586 kb on + strand, within MPMX20_00761at 792.608 kb on + strand, within MPMX20_00761at 792.618 kb on + strand, within MPMX20_00761at 792.628 kb on + strand, within MPMX20_00761at 792.687 kb on + strand, within MPMX20_00761at 792.687 kb on - strand, within MPMX20_00761at 792.752 kb on + strand, within MPMX20_00761at 792.752 kb on + strand, within MPMX20_00761at 792.946 kb on - strand, within MPMX20_00761at 792.968 kb on + strand, within MPMX20_00761at 792.976 kb on - strand, within MPMX20_00761at 793.157 kb on - strand, within MPMX20_00761at 793.455 kb on + strand, within MPMX20_00762at 793.463 kb on - strand, within MPMX20_00762at 793.463 kb on - strand, within MPMX20_00762at 793.465 kb on + strand, within MPMX20_00762at 793.474 kb on - strand, within MPMX20_00762at 793.499 kb on + strand, within MPMX20_00762at 793.681 kb on - strand, within MPMX20_00762at 793.686 kb on - strand, within MPMX20_00762at 793.686 kb on - strand, within MPMX20_00762at 793.782 kb on - strand, within MPMX20_00762at 793.821 kb on + strand, within MPMX20_00762at 793.821 kb on + strand, within MPMX20_00762at 793.821 kb on + strand, within MPMX20_00762at 793.829 kb on - strand, within MPMX20_00762at 793.965 kb on + strand, within MPMX20_00762at 793.995 kb on - strand, within MPMX20_00762at 794.054 kb on + strand, within MPMX20_00762at 794.065 kb on + strand, within MPMX20_00762at 794.066 kb on + strand, within MPMX20_00762at 794.074 kb on - strand, within MPMX20_00762at 794.101 kb on - strand, within MPMX20_00762at 794.101 kb on - strand, within MPMX20_00762at 794.131 kb on - strand, within MPMX20_00762at 794.133 kb on - strand, within MPMX20_00762at 794.179 kb on - strand, within MPMX20_00762at 794.242 kb on + strandat 794.242 kb on + strandat 794.243 kb on + strandat 794.326 kb on + strandat 794.326 kb on + strandat 794.326 kb on + strandat 794.334 kb on - strandat 794.334 kb on - strandat 794.370 kb on - strandat 794.388 kb on - strandat 794.404 kb on + strandat 794.412 kb on - strandat 794.416 kb on + strandat 794.421 kb on + strandat 794.421 kb on + strandat 794.421 kb on + strandat 794.456 kb on + strandat 794.484 kb on + strandat 794.536 kb on - strandat 794.571 kb on + strandat 794.604 kb on - strandat 794.611 kb on + strandat 794.642 kb on - strandat 794.644 kb on + strandat 794.668 kb on + strand, within MPMX20_00763at 794.692 kb on + strand, within MPMX20_00763at 794.710 kb on - strand, within MPMX20_00763at 794.717 kb on + strand, within MPMX20_00763at 794.717 kb on + strand, within MPMX20_00763at 794.732 kb on - strand, within MPMX20_00763at 794.733 kb on + strand, within MPMX20_00763at 794.733 kb on + strand, within MPMX20_00763at 794.733 kb on + strand, within MPMX20_00763at 794.733 kb on + strand, within MPMX20_00763at 794.733 kb on + strand, within MPMX20_00763at 794.741 kb on - strand, within MPMX20_00763at 794.741 kb on - strand, within MPMX20_00763at 794.753 kb on - strand, within MPMX20_00763at 794.763 kb on + strand, within MPMX20_00763at 794.828 kb on - strand, within MPMX20_00763at 794.855 kb on - strand, within MPMX20_00763at 794.909 kb on - strand, within MPMX20_00763at 794.936 kb on - strand, within MPMX20_00763at 794.937 kb on + strand, within MPMX20_00763at 795.020 kb on + strand, within MPMX20_00763at 795.028 kb on - strand, within MPMX20_00763at 795.098 kb on - strand, within MPMX20_00763at 795.098 kb on - strand, within MPMX20_00763at 795.111 kb on + strand, within MPMX20_00763at 795.111 kb on + strand, within MPMX20_00763at 795.111 kb on + strand, within MPMX20_00763at 795.111 kb on + strand, within MPMX20_00763at 795.119 kb on - strand, within MPMX20_00763at 795.119 kb on - strand, within MPMX20_00763at 795.129 kb on - strand, within MPMX20_00763at 795.188 kb on - strand, within MPMX20_00763at 795.215 kb on + strand, within MPMX20_00763at 795.221 kb on - strand, within MPMX20_00763at 795.236 kb on + strand, within MPMX20_00763

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Per-strain Table

Position Strand Gene LocusTag Fraction oxalate (C)
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792,402 - MPMX20_00761 0.40 +1.5
792,423 - MPMX20_00761 0.42 +1.7
792,474 - MPMX20_00761 0.45 -0.9
792,485 - MPMX20_00761 0.46 -1.4
792,487 + MPMX20_00761 0.46 -0.2
792,507 + MPMX20_00761 0.47 -0.5
792,512 + MPMX20_00761 0.47 +0.3
792,581 + MPMX20_00761 0.52 +0.6
792,586 + MPMX20_00761 0.52 -0.5
792,586 + MPMX20_00761 0.52 +1.1
792,608 + MPMX20_00761 0.53 +3.8
792,618 + MPMX20_00761 0.54 +0.4
792,628 + MPMX20_00761 0.55 +0.4
792,687 + MPMX20_00761 0.58 -2.5
792,687 - MPMX20_00761 0.58 +1.2
792,752 + MPMX20_00761 0.62 +3.1
792,752 + MPMX20_00761 0.62 +0.7
792,946 - MPMX20_00761 0.74 -0.9
792,968 + MPMX20_00761 0.76 +0.4
792,976 - MPMX20_00761 0.76 +0.2
793,157 - MPMX20_00761 0.87 -0.3
793,455 + MPMX20_00762 0.12 +0.1
793,463 - MPMX20_00762 0.13 -0.0
793,463 - MPMX20_00762 0.13 -0.5
793,465 + MPMX20_00762 0.13 +1.4
793,474 - MPMX20_00762 0.14 -0.6
793,499 + MPMX20_00762 0.17 -0.3
793,681 - MPMX20_00762 0.35 -2.5
793,686 - MPMX20_00762 0.36 -1.2
793,686 - MPMX20_00762 0.36 -2.3
793,782 - MPMX20_00762 0.45 -1.7
793,821 + MPMX20_00762 0.49 +0.7
793,821 + MPMX20_00762 0.49 -1.3
793,821 + MPMX20_00762 0.49 -1.8
793,829 - MPMX20_00762 0.50 -4.0
793,965 + MPMX20_00762 0.64 +0.8
793,995 - MPMX20_00762 0.67 -2.3
794,054 + MPMX20_00762 0.73 -0.7
794,065 + MPMX20_00762 0.74 -3.3
794,066 + MPMX20_00762 0.74 -0.0
794,074 - MPMX20_00762 0.75 +1.5
794,101 - MPMX20_00762 0.78 -0.5
794,101 - MPMX20_00762 0.78 -0.0
794,131 - MPMX20_00762 0.81 -0.5
794,133 - MPMX20_00762 0.81 +1.9
794,179 - MPMX20_00762 0.86 -1.3
794,242 + -1.0
794,242 + -0.6
794,243 + +1.0
794,326 + -3.8
794,326 + +0.3
794,326 + +1.9
794,334 - +0.5
794,334 - +0.2
794,370 - +0.2
794,388 - +1.5
794,404 + +0.6
794,412 - +0.8
794,416 + -3.2
794,421 + +2.1
794,421 + -3.4
794,421 + +0.4
794,456 + +0.9
794,484 + +0.9
794,536 - +0.5
794,571 + -1.9
794,604 - +1.8
794,611 + +1.4
794,642 - -0.3
794,644 + +0.8
794,668 + MPMX20_00763 0.11 +1.7
794,692 + MPMX20_00763 0.12 +1.6
794,710 - MPMX20_00763 0.13 -0.7
794,717 + MPMX20_00763 0.14 -0.7
794,717 + MPMX20_00763 0.14 +0.3
794,732 - MPMX20_00763 0.15 -3.1
794,733 + MPMX20_00763 0.15 +0.2
794,733 + MPMX20_00763 0.15 +1.1
794,733 + MPMX20_00763 0.15 -0.2
794,733 + MPMX20_00763 0.15 -0.8
794,733 + MPMX20_00763 0.15 +1.0
794,741 - MPMX20_00763 0.15 -0.4
794,741 - MPMX20_00763 0.15 -1.4
794,753 - MPMX20_00763 0.16 -0.2
794,763 + MPMX20_00763 0.17 +1.9
794,828 - MPMX20_00763 0.21 -0.9
794,855 - MPMX20_00763 0.22 -1.5
794,909 - MPMX20_00763 0.25 +0.0
794,936 - MPMX20_00763 0.27 +1.0
794,937 + MPMX20_00763 0.27 -0.5
795,020 + MPMX20_00763 0.32 -2.1
795,028 - MPMX20_00763 0.33 +4.0
795,098 - MPMX20_00763 0.37 +0.3
795,098 - MPMX20_00763 0.37 +1.3
795,111 + MPMX20_00763 0.38 +1.4
795,111 + MPMX20_00763 0.38 +0.2
795,111 + MPMX20_00763 0.38 +1.7
795,111 + MPMX20_00763 0.38 -1.0
795,119 - MPMX20_00763 0.38 -3.4
795,119 - MPMX20_00763 0.38 +0.1
795,129 - MPMX20_00763 0.39 +1.1
795,188 - MPMX20_00763 0.42 -2.8
795,215 + MPMX20_00763 0.44 -3.4
795,221 - MPMX20_00763 0.44 -2.8
795,236 + MPMX20_00763 0.45 -0.5

Or see this region's nucleotide sequence