Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02533

Experiment: D-Galacturonic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02531 and MPMX20_02532 are separated by 177 nucleotidesMPMX20_02532 and MPMX20_02533 are separated by 254 nucleotidesMPMX20_02533 and MPMX20_02534 are separated by 130 nucleotidesMPMX20_02534 and MPMX20_02535 are separated by 38 nucleotides MPMX20_02531: MPMX20_02531 - hypothetical protein, at 2,671,573 to 2,671,749 _02531 MPMX20_02532: MPMX20_02532 - hypothetical protein, at 2,671,927 to 2,672,460 _02532 MPMX20_02533: MPMX20_02533 - cAMP-activated global transcriptional regulator CRP, at 2,672,715 to 2,673,380 _02533 MPMX20_02534: MPMX20_02534 - hypothetical protein, at 2,673,511 to 2,673,645 _02534 MPMX20_02535: MPMX20_02535 - Pyrimidine-specific ribonucleoside hydrolase RihB, at 2,673,684 to 2,674,649 _02535 Position (kb) 2672 2673 2674Strain fitness (log2 ratio) -2 -1 0 1at 2671.719 kb on + strand, within MPMX20_02531at 2671.719 kb on + strand, within MPMX20_02531at 2671.719 kb on + strand, within MPMX20_02531at 2671.719 kb on + strand, within MPMX20_02531at 2671.719 kb on + strand, within MPMX20_02531at 2671.719 kb on + strand, within MPMX20_02531at 2671.719 kb on + strand, within MPMX20_02531at 2671.719 kb on + strand, within MPMX20_02531at 2671.746 kb on + strandat 2671.761 kb on + strandat 2671.962 kb on - strandat 2673.781 kb on + strand, within MPMX20_02535at 2673.805 kb on - strand, within MPMX20_02535at 2674.315 kb on - strand, within MPMX20_02535

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galacturonic Acid (C)
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2,671,719 + MPMX20_02531 0.82 -2.7
2,671,719 + MPMX20_02531 0.82 +0.7
2,671,719 + MPMX20_02531 0.82 -0.3
2,671,719 + MPMX20_02531 0.82 -0.0
2,671,719 + MPMX20_02531 0.82 -1.3
2,671,719 + MPMX20_02531 0.82 -0.6
2,671,719 + MPMX20_02531 0.82 -2.2
2,671,719 + MPMX20_02531 0.82 -2.6
2,671,746 + -1.3
2,671,761 + -1.6
2,671,962 - -2.5
2,673,781 + MPMX20_02535 0.10 -1.7
2,673,805 - MPMX20_02535 0.13 -0.3
2,674,315 - MPMX20_02535 0.65 -1.3

Or see this region's nucleotide sequence