Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02477

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02475 and MPMX20_02476 overlap by 14 nucleotidesMPMX20_02476 and MPMX20_02477 overlap by 1 nucleotidesMPMX20_02477 and MPMX20_02478 are separated by 1 nucleotidesMPMX20_02478 and MPMX20_02479 are separated by 147 nucleotides MPMX20_02475: MPMX20_02475 - Putrescine export system permease protein SapB, at 2,615,619 to 2,616,584 _02475 MPMX20_02476: MPMX20_02476 - Putrescine export system permease protein SapC, at 2,616,571 to 2,617,461 _02476 MPMX20_02477: MPMX20_02477 - Peptide transport system ATP-binding protein SapD, at 2,617,461 to 2,618,453 _02477 MPMX20_02478: MPMX20_02478 - Putrescine export system ATP-binding protein SapF, at 2,618,455 to 2,619,261 _02478 MPMX20_02479: MPMX20_02479 - Transposon Tn10 TetC protein, at 2,619,409 to 2,619,999 _02479 Position (kb) 2617 2618 2619Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2616.542 kb on + strandat 2616.585 kb on + strandat 2616.721 kb on - strand, within MPMX20_02476at 2616.789 kb on + strand, within MPMX20_02476at 2616.931 kb on - strand, within MPMX20_02476at 2616.981 kb on - strand, within MPMX20_02476at 2617.099 kb on + strand, within MPMX20_02476at 2617.150 kb on + strand, within MPMX20_02476at 2617.158 kb on - strand, within MPMX20_02476at 2617.296 kb on + strand, within MPMX20_02476at 2617.349 kb on + strand, within MPMX20_02476at 2617.426 kb on + strandat 2617.426 kb on + strandat 2617.426 kb on + strandat 2617.426 kb on + strandat 2617.434 kb on - strandat 2617.434 kb on - strandat 2617.540 kb on + strandat 2617.546 kb on + strandat 2617.548 kb on - strandat 2617.601 kb on - strand, within MPMX20_02477at 2617.651 kb on + strand, within MPMX20_02477at 2617.731 kb on - strand, within MPMX20_02477at 2617.762 kb on + strand, within MPMX20_02477at 2617.762 kb on + strand, within MPMX20_02477at 2618.050 kb on - strand, within MPMX20_02477at 2618.076 kb on - strand, within MPMX20_02477at 2618.115 kb on - strand, within MPMX20_02477at 2618.188 kb on + strand, within MPMX20_02477at 2618.195 kb on + strand, within MPMX20_02477at 2618.201 kb on - strand, within MPMX20_02477at 2618.203 kb on - strand, within MPMX20_02477at 2618.203 kb on - strand, within MPMX20_02477at 2618.260 kb on + strand, within MPMX20_02477at 2618.299 kb on + strand, within MPMX20_02477at 2618.312 kb on + strand, within MPMX20_02477at 2618.312 kb on - strand, within MPMX20_02477at 2618.457 kb on + strandat 2618.485 kb on - strandat 2618.487 kb on + strandat 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.555 kb on + strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.563 kb on - strand, within MPMX20_02478at 2618.644 kb on + strand, within MPMX20_02478at 2618.731 kb on + strand, within MPMX20_02478at 2618.733 kb on + strand, within MPMX20_02478at 2618.862 kb on + strand, within MPMX20_02478at 2618.915 kb on + strand, within MPMX20_02478at 2618.997 kb on + strand, within MPMX20_02478at 2619.114 kb on + strand, within MPMX20_02478at 2619.114 kb on + strand, within MPMX20_02478at 2619.114 kb on + strand, within MPMX20_02478at 2619.132 kb on + strand, within MPMX20_02478at 2619.150 kb on + strand, within MPMX20_02478at 2619.327 kb on + strandat 2619.351 kb on + strandat 2619.371 kb on + strandat 2619.371 kb on + strandat 2619.371 kb on + strandat 2619.379 kb on - strandat 2619.401 kb on - strandat 2619.425 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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2,616,542 + -2.0
2,616,585 + -1.0
2,616,721 - MPMX20_02476 0.17 -0.6
2,616,789 + MPMX20_02476 0.24 -0.2
2,616,931 - MPMX20_02476 0.40 -1.4
2,616,981 - MPMX20_02476 0.46 -1.4
2,617,099 + MPMX20_02476 0.59 -1.6
2,617,150 + MPMX20_02476 0.65 -2.5
2,617,158 - MPMX20_02476 0.66 -1.6
2,617,296 + MPMX20_02476 0.81 +1.4
2,617,349 + MPMX20_02476 0.87 +0.8
2,617,426 + -1.5
2,617,426 + -1.9
2,617,426 + +1.4
2,617,426 + -3.0
2,617,434 - -2.0
2,617,434 - -1.9
2,617,540 + -1.4
2,617,546 + -1.6
2,617,548 - -0.9
2,617,601 - MPMX20_02477 0.14 -0.2
2,617,651 + MPMX20_02477 0.19 +1.4
2,617,731 - MPMX20_02477 0.27 -0.2
2,617,762 + MPMX20_02477 0.30 -0.9
2,617,762 + MPMX20_02477 0.30 -1.8
2,618,050 - MPMX20_02477 0.59 -1.7
2,618,076 - MPMX20_02477 0.62 -1.9
2,618,115 - MPMX20_02477 0.66 -0.2
2,618,188 + MPMX20_02477 0.73 -2.4
2,618,195 + MPMX20_02477 0.74 -0.6
2,618,201 - MPMX20_02477 0.75 -2.4
2,618,203 - MPMX20_02477 0.75 -1.8
2,618,203 - MPMX20_02477 0.75 +2.4
2,618,260 + MPMX20_02477 0.80 +0.4
2,618,299 + MPMX20_02477 0.84 -0.4
2,618,312 + MPMX20_02477 0.86 -3.0
2,618,312 - MPMX20_02477 0.86 -0.4
2,618,457 + -1.2
2,618,485 - -2.0
2,618,487 + +0.5
2,618,555 + MPMX20_02478 0.12 -2.0
2,618,555 + MPMX20_02478 0.12 -1.6
2,618,555 + MPMX20_02478 0.12 -0.9
2,618,555 + MPMX20_02478 0.12 -2.0
2,618,555 + MPMX20_02478 0.12 -1.8
2,618,555 + MPMX20_02478 0.12 -0.8
2,618,555 + MPMX20_02478 0.12 -2.9
2,618,555 + MPMX20_02478 0.12 -2.1
2,618,555 + MPMX20_02478 0.12 +0.8
2,618,555 + MPMX20_02478 0.12 -0.2
2,618,555 + MPMX20_02478 0.12 +0.8
2,618,555 + MPMX20_02478 0.12 -1.4
2,618,555 + MPMX20_02478 0.12 -3.2
2,618,555 + MPMX20_02478 0.12 -1.6
2,618,555 + MPMX20_02478 0.12 -0.9
2,618,563 - MPMX20_02478 0.13 +1.1
2,618,563 - MPMX20_02478 0.13 -2.0
2,618,563 - MPMX20_02478 0.13 -1.6
2,618,563 - MPMX20_02478 0.13 -1.2
2,618,563 - MPMX20_02478 0.13 -0.9
2,618,563 - MPMX20_02478 0.13 -0.2
2,618,563 - MPMX20_02478 0.13 -0.9
2,618,563 - MPMX20_02478 0.13 +0.4
2,618,563 - MPMX20_02478 0.13 -1.8
2,618,563 - MPMX20_02478 0.13 +0.4
2,618,563 - MPMX20_02478 0.13 -0.6
2,618,563 - MPMX20_02478 0.13 -1.0
2,618,563 - MPMX20_02478 0.13 -0.6
2,618,563 - MPMX20_02478 0.13 -0.6
2,618,563 - MPMX20_02478 0.13 +0.1
2,618,644 + MPMX20_02478 0.23 -1.6
2,618,731 + MPMX20_02478 0.34 -1.9
2,618,733 + MPMX20_02478 0.34 -1.8
2,618,862 + MPMX20_02478 0.50 -1.9
2,618,915 + MPMX20_02478 0.57 +0.2
2,618,997 + MPMX20_02478 0.67 -0.2
2,619,114 + MPMX20_02478 0.82 -1.6
2,619,114 + MPMX20_02478 0.82 +0.0
2,619,114 + MPMX20_02478 0.82 -1.3
2,619,132 + MPMX20_02478 0.84 -0.4
2,619,150 + MPMX20_02478 0.86 -1.8
2,619,327 + -0.9
2,619,351 + +0.4
2,619,371 + -0.4
2,619,371 + -0.6
2,619,371 + -0.7
2,619,379 - +0.2
2,619,401 - +0.4
2,619,425 - +0.2

Or see this region's nucleotide sequence