Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04527

Experiment: D-Mannitol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04525 and MPMX20_04526 are separated by 128 nucleotidesMPMX20_04526 and MPMX20_04527 are separated by 12 nucleotidesMPMX20_04527 and MPMX20_04528 are separated by 49 nucleotides MPMX20_04525: MPMX20_04525 - HTH-type transcriptional activator RhaR, at 4,735,625 to 4,736,389 _04525 MPMX20_04526: MPMX20_04526 - Fructose-6-phosphate aldolase 2, at 4,736,518 to 4,737,180 _04526 MPMX20_04527: MPMX20_04527 - Glycerol dehydrogenase, at 4,737,193 to 4,738,296 _04527 MPMX20_04528: MPMX20_04528 - Catalase-peroxidase, at 4,738,346 to 4,740,526 _04528 Position (kb) 4737 4738 4739Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4736.223 kb on - strand, within MPMX20_04525at 4736.234 kb on - strand, within MPMX20_04525at 4736.477 kb on + strandat 4736.477 kb on + strandat 4736.480 kb on - strandat 4736.594 kb on + strand, within MPMX20_04526at 4736.594 kb on + strand, within MPMX20_04526at 4736.623 kb on + strand, within MPMX20_04526at 4736.631 kb on + strand, within MPMX20_04526at 4736.640 kb on - strand, within MPMX20_04526at 4736.710 kb on + strand, within MPMX20_04526at 4736.710 kb on + strand, within MPMX20_04526at 4736.718 kb on - strand, within MPMX20_04526at 4736.718 kb on - strand, within MPMX20_04526at 4736.748 kb on + strand, within MPMX20_04526at 4736.792 kb on + strand, within MPMX20_04526at 4736.792 kb on + strand, within MPMX20_04526at 4736.793 kb on - strand, within MPMX20_04526at 4736.800 kb on - strand, within MPMX20_04526at 4736.842 kb on - strand, within MPMX20_04526at 4736.853 kb on - strand, within MPMX20_04526at 4736.860 kb on + strand, within MPMX20_04526at 4736.860 kb on + strand, within MPMX20_04526at 4736.868 kb on - strand, within MPMX20_04526at 4736.989 kb on + strand, within MPMX20_04526at 4737.042 kb on - strand, within MPMX20_04526at 4737.132 kb on - strandat 4737.134 kb on + strandat 4737.135 kb on + strandat 4737.168 kb on + strandat 4737.175 kb on + strandat 4737.176 kb on - strandat 4737.176 kb on - strandat 4737.190 kb on + strandat 4737.196 kb on - strandat 4737.198 kb on - strandat 4737.198 kb on - strandat 4737.198 kb on - strandat 4737.198 kb on - strandat 4737.198 kb on - strandat 4737.198 kb on - strandat 4737.229 kb on - strandat 4737.241 kb on + strandat 4737.249 kb on - strandat 4737.325 kb on - strand, within MPMX20_04527at 4737.445 kb on - strand, within MPMX20_04527at 4737.454 kb on - strand, within MPMX20_04527at 4737.454 kb on - strand, within MPMX20_04527at 4737.486 kb on - strand, within MPMX20_04527at 4737.540 kb on - strand, within MPMX20_04527at 4737.601 kb on - strand, within MPMX20_04527at 4737.787 kb on + strand, within MPMX20_04527at 4737.795 kb on - strand, within MPMX20_04527at 4737.795 kb on - strand, within MPMX20_04527at 4737.799 kb on + strand, within MPMX20_04527at 4737.831 kb on + strand, within MPMX20_04527at 4737.839 kb on - strand, within MPMX20_04527at 4737.906 kb on - strand, within MPMX20_04527at 4737.940 kb on - strand, within MPMX20_04527at 4738.077 kb on + strand, within MPMX20_04527at 4738.089 kb on + strand, within MPMX20_04527at 4738.097 kb on + strand, within MPMX20_04527at 4738.097 kb on + strand, within MPMX20_04527at 4738.105 kb on - strand, within MPMX20_04527at 4738.131 kb on - strand, within MPMX20_04527at 4738.196 kb on - strandat 4738.196 kb on - strandat 4738.225 kb on - strandat 4738.233 kb on + strandat 4738.241 kb on - strandat 4738.256 kb on - strandat 4738.256 kb on - strandat 4738.256 kb on - strandat 4738.275 kb on - strandat 4738.362 kb on - strandat 4738.433 kb on + strandat 4738.448 kb on - strandat 4738.575 kb on + strand, within MPMX20_04528at 4738.583 kb on - strand, within MPMX20_04528at 4738.583 kb on - strand, within MPMX20_04528at 4738.583 kb on - strand, within MPMX20_04528at 4738.674 kb on - strand, within MPMX20_04528at 4738.789 kb on - strand, within MPMX20_04528at 4738.816 kb on + strand, within MPMX20_04528at 4738.843 kb on - strand, within MPMX20_04528at 4738.852 kb on + strand, within MPMX20_04528at 4738.860 kb on - strand, within MPMX20_04528at 4738.860 kb on - strand, within MPMX20_04528at 4738.912 kb on + strand, within MPMX20_04528at 4738.912 kb on + strand, within MPMX20_04528at 4739.000 kb on + strand, within MPMX20_04528at 4739.008 kb on - strand, within MPMX20_04528at 4739.008 kb on - strand, within MPMX20_04528at 4739.033 kb on + strand, within MPMX20_04528at 4739.041 kb on - strand, within MPMX20_04528at 4739.141 kb on - strand, within MPMX20_04528at 4739.143 kb on + strand, within MPMX20_04528at 4739.165 kb on - strand, within MPMX20_04528at 4739.193 kb on + strand, within MPMX20_04528at 4739.203 kb on - strand, within MPMX20_04528at 4739.236 kb on - strand, within MPMX20_04528at 4739.294 kb on - strand, within MPMX20_04528

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Mannitol (C)
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4,736,223 - MPMX20_04525 0.78 +1.3
4,736,234 - MPMX20_04525 0.80 -0.0
4,736,477 + -0.6
4,736,477 + +0.2
4,736,480 - -1.1
4,736,594 + MPMX20_04526 0.11 +0.2
4,736,594 + MPMX20_04526 0.11 -0.0
4,736,623 + MPMX20_04526 0.16 -1.7
4,736,631 + MPMX20_04526 0.17 +0.2
4,736,640 - MPMX20_04526 0.18 -0.3
4,736,710 + MPMX20_04526 0.29 +0.8
4,736,710 + MPMX20_04526 0.29 -0.3
4,736,718 - MPMX20_04526 0.30 -0.9
4,736,718 - MPMX20_04526 0.30 +0.0
4,736,748 + MPMX20_04526 0.35 +0.7
4,736,792 + MPMX20_04526 0.41 -2.8
4,736,792 + MPMX20_04526 0.41 -0.5
4,736,793 - MPMX20_04526 0.41 -1.5
4,736,800 - MPMX20_04526 0.43 +0.8
4,736,842 - MPMX20_04526 0.49 +0.3
4,736,853 - MPMX20_04526 0.51 -0.5
4,736,860 + MPMX20_04526 0.52 +1.3
4,736,860 + MPMX20_04526 0.52 +1.7
4,736,868 - MPMX20_04526 0.53 -1.2
4,736,989 + MPMX20_04526 0.71 +0.9
4,737,042 - MPMX20_04526 0.79 -1.2
4,737,132 - +1.3
4,737,134 + +0.8
4,737,135 + +0.7
4,737,168 + +1.1
4,737,175 + +1.3
4,737,176 - +0.7
4,737,176 - -0.3
4,737,190 + -2.3
4,737,196 - -0.6
4,737,198 - -1.8
4,737,198 - -0.4
4,737,198 - -1.4
4,737,198 - -0.5
4,737,198 - +0.8
4,737,198 - +0.2
4,737,229 - +1.7
4,737,241 + -1.0
4,737,249 - +0.2
4,737,325 - MPMX20_04527 0.12 +0.1
4,737,445 - MPMX20_04527 0.23 +2.2
4,737,454 - MPMX20_04527 0.24 -0.1
4,737,454 - MPMX20_04527 0.24 -0.2
4,737,486 - MPMX20_04527 0.27 +0.5
4,737,540 - MPMX20_04527 0.31 -1.2
4,737,601 - MPMX20_04527 0.37 +2.4
4,737,787 + MPMX20_04527 0.54 +1.4
4,737,795 - MPMX20_04527 0.55 +2.6
4,737,795 - MPMX20_04527 0.55 +0.8
4,737,799 + MPMX20_04527 0.55 -2.3
4,737,831 + MPMX20_04527 0.58 +0.3
4,737,839 - MPMX20_04527 0.59 +0.3
4,737,906 - MPMX20_04527 0.65 -0.7
4,737,940 - MPMX20_04527 0.68 +1.1
4,738,077 + MPMX20_04527 0.80 +1.5
4,738,089 + MPMX20_04527 0.81 +0.4
4,738,097 + MPMX20_04527 0.82 +0.1
4,738,097 + MPMX20_04527 0.82 +0.1
4,738,105 - MPMX20_04527 0.83 +0.7
4,738,131 - MPMX20_04527 0.85 +1.3
4,738,196 - +0.7
4,738,196 - +0.2
4,738,225 - +0.2
4,738,233 + +1.5
4,738,241 - +0.1
4,738,256 - -0.0
4,738,256 - -0.1
4,738,256 - +0.3
4,738,275 - -1.6
4,738,362 - +0.8
4,738,433 + +1.0
4,738,448 - -0.0
4,738,575 + MPMX20_04528 0.10 +0.3
4,738,583 - MPMX20_04528 0.11 +0.7
4,738,583 - MPMX20_04528 0.11 -0.9
4,738,583 - MPMX20_04528 0.11 +0.1
4,738,674 - MPMX20_04528 0.15 -0.3
4,738,789 - MPMX20_04528 0.20 -2.1
4,738,816 + MPMX20_04528 0.22 -1.7
4,738,843 - MPMX20_04528 0.23 -2.4
4,738,852 + MPMX20_04528 0.23 -0.9
4,738,860 - MPMX20_04528 0.24 +0.3
4,738,860 - MPMX20_04528 0.24 +0.1
4,738,912 + MPMX20_04528 0.26 +0.0
4,738,912 + MPMX20_04528 0.26 +0.2
4,739,000 + MPMX20_04528 0.30 +2.9
4,739,008 - MPMX20_04528 0.30 +0.6
4,739,008 - MPMX20_04528 0.30 -0.8
4,739,033 + MPMX20_04528 0.31 +0.5
4,739,041 - MPMX20_04528 0.32 +1.3
4,739,141 - MPMX20_04528 0.36 -0.3
4,739,143 + MPMX20_04528 0.37 -1.1
4,739,165 - MPMX20_04528 0.38 +0.0
4,739,193 + MPMX20_04528 0.39 +0.1
4,739,203 - MPMX20_04528 0.39 +0.2
4,739,236 - MPMX20_04528 0.41 +2.9
4,739,294 - MPMX20_04528 0.43 +0.1

Or see this region's nucleotide sequence