Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04243

Experiment: Xylitol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04241 and MPMX20_04242 are separated by 54 nucleotidesMPMX20_04242 and MPMX20_04243 are separated by 94 nucleotidesMPMX20_04243 and MPMX20_04244 are separated by 13 nucleotides MPMX20_04241: MPMX20_04241 - Protein SlyX, at 4,425,283 to 4,425,501 _04241 MPMX20_04242: MPMX20_04242 - hypothetical protein, at 4,425,556 to 4,426,146 _04242 MPMX20_04243: MPMX20_04243 - hypothetical protein, at 4,426,241 to 4,426,441 _04243 MPMX20_04244: MPMX20_04244 - Glutathione-regulated potassium-efflux system protein KefC, at 4,426,455 to 4,428,260 _04244 Position (kb) 4426 4427Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 4425.288 kb on + strandat 4425.311 kb on + strand, within MPMX20_04241at 4425.360 kb on + strand, within MPMX20_04241at 4425.363 kb on + strand, within MPMX20_04241at 4425.371 kb on - strand, within MPMX20_04241at 4425.412 kb on + strand, within MPMX20_04241at 4425.451 kb on - strand, within MPMX20_04241at 4425.490 kb on + strandat 4425.490 kb on + strandat 4425.490 kb on + strandat 4425.490 kb on - strandat 4425.566 kb on + strandat 4425.571 kb on + strandat 4425.590 kb on + strandat 4425.598 kb on - strandat 4425.598 kb on - strandat 4425.598 kb on - strandat 4425.598 kb on - strandat 4425.598 kb on - strandat 4425.598 kb on - strandat 4425.598 kb on - strandat 4425.806 kb on + strand, within MPMX20_04242at 4425.926 kb on - strand, within MPMX20_04242at 4426.046 kb on - strand, within MPMX20_04242at 4426.072 kb on - strand, within MPMX20_04242at 4426.152 kb on + strandat 4426.201 kb on + strandat 4426.203 kb on + strandat 4426.299 kb on + strand, within MPMX20_04243at 4426.430 kb on + strandat 4426.549 kb on + strandat 4426.549 kb on + strandat 4426.557 kb on - strandat 4426.572 kb on - strandat 4426.588 kb on - strandat 4426.595 kb on + strandat 4426.603 kb on - strandat 4426.642 kb on - strand, within MPMX20_04244at 4426.732 kb on + strand, within MPMX20_04244at 4426.781 kb on - strand, within MPMX20_04244at 4426.786 kb on - strand, within MPMX20_04244at 4426.813 kb on + strand, within MPMX20_04244at 4426.840 kb on - strand, within MPMX20_04244at 4426.903 kb on - strand, within MPMX20_04244at 4426.903 kb on - strand, within MPMX20_04244at 4426.904 kb on + strand, within MPMX20_04244at 4426.962 kb on + strand, within MPMX20_04244at 4426.971 kb on + strand, within MPMX20_04244at 4426.971 kb on + strand, within MPMX20_04244at 4426.977 kb on - strand, within MPMX20_04244at 4427.019 kb on - strand, within MPMX20_04244at 4427.024 kb on + strand, within MPMX20_04244at 4427.032 kb on - strand, within MPMX20_04244at 4427.105 kb on + strand, within MPMX20_04244at 4427.137 kb on + strand, within MPMX20_04244at 4427.169 kb on + strand, within MPMX20_04244at 4427.187 kb on + strand, within MPMX20_04244at 4427.214 kb on - strand, within MPMX20_04244at 4427.233 kb on + strand, within MPMX20_04244at 4427.233 kb on + strand, within MPMX20_04244at 4427.233 kb on + strand, within MPMX20_04244at 4427.241 kb on - strand, within MPMX20_04244at 4427.267 kb on + strand, within MPMX20_04244at 4427.275 kb on - strand, within MPMX20_04244at 4427.275 kb on - strand, within MPMX20_04244at 4427.286 kb on + strand, within MPMX20_04244at 4427.294 kb on + strand, within MPMX20_04244at 4427.294 kb on + strand, within MPMX20_04244at 4427.294 kb on + strand, within MPMX20_04244at 4427.294 kb on + strand, within MPMX20_04244at 4427.294 kb on + strand, within MPMX20_04244at 4427.299 kb on + strand, within MPMX20_04244at 4427.307 kb on - strand, within MPMX20_04244at 4427.307 kb on - strand, within MPMX20_04244at 4427.311 kb on + strand, within MPMX20_04244at 4427.360 kb on + strand, within MPMX20_04244at 4427.363 kb on + strand, within MPMX20_04244at 4427.371 kb on + strand, within MPMX20_04244at 4427.371 kb on - strand, within MPMX20_04244at 4427.385 kb on + strand, within MPMX20_04244at 4427.400 kb on + strand, within MPMX20_04244at 4427.411 kb on + strand, within MPMX20_04244at 4427.415 kb on - strand, within MPMX20_04244at 4427.417 kb on + strand, within MPMX20_04244

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Per-strain Table

Position Strand Gene LocusTag Fraction Xylitol (C)
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4,425,288 + +1.5
4,425,311 + MPMX20_04241 0.13 +0.3
4,425,360 + MPMX20_04241 0.35 +3.7
4,425,363 + MPMX20_04241 0.37 +0.3
4,425,371 - MPMX20_04241 0.40 -2.8
4,425,412 + MPMX20_04241 0.59 +1.5
4,425,451 - MPMX20_04241 0.77 +0.8
4,425,490 + -1.7
4,425,490 + -0.2
4,425,490 + +1.6
4,425,490 - +0.1
4,425,566 + -0.1
4,425,571 + -3.3
4,425,590 + +0.1
4,425,598 - +1.0
4,425,598 - +2.0
4,425,598 - -0.7
4,425,598 - -1.8
4,425,598 - -4.1
4,425,598 - +0.1
4,425,598 - -0.2
4,425,806 + MPMX20_04242 0.42 -1.0
4,425,926 - MPMX20_04242 0.63 -2.7
4,426,046 - MPMX20_04242 0.83 +0.1
4,426,072 - MPMX20_04242 0.87 +0.1
4,426,152 + +0.8
4,426,201 + -2.7
4,426,203 + +0.1
4,426,299 + MPMX20_04243 0.29 -1.0
4,426,430 + +0.6
4,426,549 + +1.4
4,426,549 + +0.6
4,426,557 - -0.9
4,426,572 - -0.7
4,426,588 - +1.2
4,426,595 + -0.3
4,426,603 - +2.2
4,426,642 - MPMX20_04244 0.10 +1.3
4,426,732 + MPMX20_04244 0.15 +3.3
4,426,781 - MPMX20_04244 0.18 +2.1
4,426,786 - MPMX20_04244 0.18 -1.2
4,426,813 + MPMX20_04244 0.20 +0.5
4,426,840 - MPMX20_04244 0.21 -3.9
4,426,903 - MPMX20_04244 0.25 +1.7
4,426,903 - MPMX20_04244 0.25 -0.0
4,426,904 + MPMX20_04244 0.25 +2.9
4,426,962 + MPMX20_04244 0.28 +1.2
4,426,971 + MPMX20_04244 0.29 +3.4
4,426,971 + MPMX20_04244 0.29 -0.1
4,426,977 - MPMX20_04244 0.29 -0.3
4,427,019 - MPMX20_04244 0.31 -3.7
4,427,024 + MPMX20_04244 0.32 +1.6
4,427,032 - MPMX20_04244 0.32 +0.7
4,427,105 + MPMX20_04244 0.36 -0.4
4,427,137 + MPMX20_04244 0.38 -1.5
4,427,169 + MPMX20_04244 0.40 -1.4
4,427,187 + MPMX20_04244 0.41 -1.1
4,427,214 - MPMX20_04244 0.42 -0.7
4,427,233 + MPMX20_04244 0.43 +1.3
4,427,233 + MPMX20_04244 0.43 -0.1
4,427,233 + MPMX20_04244 0.43 -3.8
4,427,241 - MPMX20_04244 0.44 -0.6
4,427,267 + MPMX20_04244 0.45 -1.7
4,427,275 - MPMX20_04244 0.45 -0.5
4,427,275 - MPMX20_04244 0.45 -1.3
4,427,286 + MPMX20_04244 0.46 -0.1
4,427,294 + MPMX20_04244 0.46 +1.0
4,427,294 + MPMX20_04244 0.46 -0.0
4,427,294 + MPMX20_04244 0.46 -1.7
4,427,294 + MPMX20_04244 0.46 -2.1
4,427,294 + MPMX20_04244 0.46 +4.2
4,427,299 + MPMX20_04244 0.47 -0.7
4,427,307 - MPMX20_04244 0.47 +1.7
4,427,307 - MPMX20_04244 0.47 +1.6
4,427,311 + MPMX20_04244 0.47 +1.4
4,427,360 + MPMX20_04244 0.50 +1.3
4,427,363 + MPMX20_04244 0.50 -1.1
4,427,371 + MPMX20_04244 0.51 -0.1
4,427,371 - MPMX20_04244 0.51 -1.4
4,427,385 + MPMX20_04244 0.51 -0.5
4,427,400 + MPMX20_04244 0.52 -2.6
4,427,411 + MPMX20_04244 0.53 +1.4
4,427,415 - MPMX20_04244 0.53 -3.3
4,427,417 + MPMX20_04244 0.53 -0.9

Or see this region's nucleotide sequence