Experiment: Xylitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03134 and MPMX20_03135 overlap by 4 nucleotides MPMX20_03135 and MPMX20_03136 are separated by 164 nucleotides MPMX20_03136 and MPMX20_03137 are separated by 43 nucleotides
MPMX20_03134: MPMX20_03134 - Sugar efflux transporter B, at 3,294,179 to 3,295,360
_03134
MPMX20_03135: MPMX20_03135 - hypothetical protein, at 3,295,357 to 3,295,611
_03135
MPMX20_03136: MPMX20_03136 - Elongation factor P-like protein, at 3,295,776 to 3,296,348
_03136
MPMX20_03137: MPMX20_03137 - Mannonate dehydratase, at 3,296,392 to 3,297,582
_03137
Position (kb)
3295
3296 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 3294.455 kb on + strand, within MPMX20_03134 at 3294.455 kb on + strand, within MPMX20_03134 at 3294.463 kb on - strand, within MPMX20_03134 at 3294.463 kb on - strand, within MPMX20_03134 at 3294.612 kb on + strand, within MPMX20_03134 at 3294.612 kb on + strand, within MPMX20_03134 at 3294.620 kb on - strand, within MPMX20_03134 at 3294.620 kb on - strand, within MPMX20_03134 at 3294.620 kb on - strand, within MPMX20_03134 at 3294.636 kb on + strand, within MPMX20_03134 at 3294.640 kb on + strand, within MPMX20_03134 at 3294.654 kb on - strand, within MPMX20_03134 at 3294.674 kb on - strand, within MPMX20_03134 at 3294.684 kb on + strand, within MPMX20_03134 at 3294.711 kb on - strand, within MPMX20_03134 at 3294.778 kb on + strand, within MPMX20_03134 at 3294.786 kb on - strand, within MPMX20_03134 at 3294.806 kb on + strand, within MPMX20_03134 at 3294.820 kb on - strand, within MPMX20_03134 at 3294.835 kb on + strand, within MPMX20_03134 at 3294.884 kb on - strand, within MPMX20_03134 at 3294.884 kb on - strand, within MPMX20_03134 at 3294.941 kb on + strand, within MPMX20_03134 at 3294.949 kb on + strand, within MPMX20_03134 at 3294.988 kb on - strand, within MPMX20_03134 at 3294.996 kb on - strand, within MPMX20_03134 at 3295.060 kb on + strand, within MPMX20_03134 at 3295.097 kb on - strand, within MPMX20_03134 at 3295.099 kb on - strand, within MPMX20_03134 at 3295.159 kb on + strand, within MPMX20_03134 at 3295.174 kb on + strand, within MPMX20_03134 at 3295.189 kb on + strand, within MPMX20_03134 at 3295.273 kb on + strand at 3295.294 kb on + strand at 3295.302 kb on - strand at 3295.324 kb on + strand at 3295.402 kb on - strand, within MPMX20_03135 at 3295.415 kb on + strand, within MPMX20_03135 at 3295.425 kb on + strand, within MPMX20_03135 at 3295.437 kb on + strand, within MPMX20_03135 at 3295.445 kb on - strand, within MPMX20_03135 at 3295.572 kb on + strand, within MPMX20_03135 at 3295.592 kb on + strand at 3295.645 kb on + strand at 3295.645 kb on + strand at 3295.653 kb on - strand at 3295.662 kb on + strand at 3295.662 kb on + strand at 3295.662 kb on + strand at 3295.662 kb on + strand at 3295.670 kb on - strand at 3295.670 kb on - strand at 3295.670 kb on - strand at 3295.755 kb on + strand at 3295.763 kb on - strand at 3295.773 kb on - strand at 3295.773 kb on - strand at 3295.778 kb on + strand at 3295.859 kb on + strand, within MPMX20_03136 at 3295.879 kb on + strand, within MPMX20_03136 at 3295.879 kb on + strand, within MPMX20_03136 at 3295.879 kb on + strand, within MPMX20_03136 at 3295.911 kb on - strand, within MPMX20_03136 at 3295.915 kb on + strand, within MPMX20_03136 at 3295.919 kb on - strand, within MPMX20_03136 at 3295.971 kb on + strand, within MPMX20_03136 at 3295.971 kb on + strand, within MPMX20_03136 at 3296.047 kb on - strand, within MPMX20_03136 at 3296.047 kb on - strand, within MPMX20_03136 at 3296.047 kb on - strand, within MPMX20_03136 at 3296.049 kb on + strand, within MPMX20_03136 at 3296.057 kb on - strand, within MPMX20_03136 at 3296.129 kb on + strand, within MPMX20_03136 at 3296.132 kb on - strand, within MPMX20_03136 at 3296.170 kb on + strand, within MPMX20_03136 at 3296.196 kb on + strand, within MPMX20_03136 at 3296.265 kb on - strand, within MPMX20_03136 at 3296.398 kb on - strand at 3296.430 kb on + strand at 3296.430 kb on + strand at 3296.451 kb on - strand at 3296.464 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xylitol (C) remove 3,294,455 + MPMX20_03134 0.23 -1.4 3,294,455 + MPMX20_03134 0.23 +1.5 3,294,463 - MPMX20_03134 0.24 -1.3 3,294,463 - MPMX20_03134 0.24 +1.0 3,294,612 + MPMX20_03134 0.37 +1.3 3,294,612 + MPMX20_03134 0.37 +0.8 3,294,620 - MPMX20_03134 0.37 +3.8 3,294,620 - MPMX20_03134 0.37 -2.2 3,294,620 - MPMX20_03134 0.37 -1.9 3,294,636 + MPMX20_03134 0.39 +0.2 3,294,640 + MPMX20_03134 0.39 +0.6 3,294,654 - MPMX20_03134 0.40 +0.5 3,294,674 - MPMX20_03134 0.42 +1.0 3,294,684 + MPMX20_03134 0.43 -3.0 3,294,711 - MPMX20_03134 0.45 +2.2 3,294,778 + MPMX20_03134 0.51 +1.2 3,294,786 - MPMX20_03134 0.51 -1.4 3,294,806 + MPMX20_03134 0.53 +3.0 3,294,820 - MPMX20_03134 0.54 +0.0 3,294,835 + MPMX20_03134 0.55 -2.3 3,294,884 - MPMX20_03134 0.60 -0.9 3,294,884 - MPMX20_03134 0.60 -2.0 3,294,941 + MPMX20_03134 0.64 -0.3 3,294,949 + MPMX20_03134 0.65 +1.6 3,294,988 - MPMX20_03134 0.68 +1.2 3,294,996 - MPMX20_03134 0.69 +4.1 3,295,060 + MPMX20_03134 0.75 +2.2 3,295,097 - MPMX20_03134 0.78 +2.4 3,295,099 - MPMX20_03134 0.78 +1.6 3,295,159 + MPMX20_03134 0.83 +1.2 3,295,174 + MPMX20_03134 0.84 -2.6 3,295,189 + MPMX20_03134 0.85 +1.7 3,295,273 + +0.0 3,295,294 + +2.1 3,295,302 - +1.0 3,295,324 + +0.7 3,295,402 - MPMX20_03135 0.18 +0.1 3,295,415 + MPMX20_03135 0.23 -2.6 3,295,425 + MPMX20_03135 0.27 -3.0 3,295,437 + MPMX20_03135 0.31 -2.2 3,295,445 - MPMX20_03135 0.35 +2.0 3,295,572 + MPMX20_03135 0.84 -3.8 3,295,592 + +1.2 3,295,645 + +0.1 3,295,645 + +0.8 3,295,653 - +1.7 3,295,662 + +1.0 3,295,662 + +1.0 3,295,662 + +1.7 3,295,662 + +0.8 3,295,670 - +1.0 3,295,670 - +0.0 3,295,670 - +0.8 3,295,755 + +0.5 3,295,763 - +0.7 3,295,773 - -3.5 3,295,773 - -2.2 3,295,778 + +1.0 3,295,859 + MPMX20_03136 0.14 -2.4 3,295,879 + MPMX20_03136 0.18 -2.2 3,295,879 + MPMX20_03136 0.18 -2.4 3,295,879 + MPMX20_03136 0.18 +0.4 3,295,911 - MPMX20_03136 0.24 +2.0 3,295,915 + MPMX20_03136 0.24 -0.3 3,295,919 - MPMX20_03136 0.25 -2.8 3,295,971 + MPMX20_03136 0.34 -2.0 3,295,971 + MPMX20_03136 0.34 +1.1 3,296,047 - MPMX20_03136 0.47 -2.5 3,296,047 - MPMX20_03136 0.47 -0.4 3,296,047 - MPMX20_03136 0.47 +0.1 3,296,049 + MPMX20_03136 0.48 -1.8 3,296,057 - MPMX20_03136 0.49 -1.9 3,296,129 + MPMX20_03136 0.62 +0.8 3,296,132 - MPMX20_03136 0.62 -0.4 3,296,170 + MPMX20_03136 0.69 +1.5 3,296,196 + MPMX20_03136 0.73 -0.9 3,296,265 - MPMX20_03136 0.85 +0.3 3,296,398 - -4.4 3,296,430 + +1.2 3,296,430 + +0.4 3,296,451 - +1.5 3,296,464 - -2.9
Or see this region's nucleotide sequence