Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00468

Experiment: Xylitol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00466 and MPMX20_00467 are separated by 158 nucleotidesMPMX20_00467 and MPMX20_00468 overlap by 4 nucleotidesMPMX20_00468 and MPMX20_00469 are separated by 111 nucleotides MPMX20_00466: MPMX20_00466 - Lipoprotein BsmA, at 483,380 to 483,688 _00466 MPMX20_00467: MPMX20_00467 - hypothetical protein, at 483,847 to 484,569 _00467 MPMX20_00468: MPMX20_00468 - HTH-type transcriptional regulator UlaR, at 484,566 to 485,321 _00468 MPMX20_00469: MPMX20_00469 - putative L-ascorbate-6-phosphate lactonase UlaG, at 485,433 to 486,497 _00469 Position (kb) 484 485 486Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 483.586 kb on + strand, within MPMX20_00466at 483.594 kb on - strand, within MPMX20_00466at 483.618 kb on + strand, within MPMX20_00466at 483.626 kb on - strand, within MPMX20_00466at 483.646 kb on + strand, within MPMX20_00466at 483.647 kb on - strand, within MPMX20_00466at 483.677 kb on + strandat 483.711 kb on + strandat 483.711 kb on + strandat 483.714 kb on - strandat 483.719 kb on - strandat 483.719 kb on - strandat 483.754 kb on + strandat 483.762 kb on - strandat 483.762 kb on - strandat 483.806 kb on + strandat 483.814 kb on - strandat 483.814 kb on - strandat 483.828 kb on + strandat 483.841 kb on - strandat 483.859 kb on + strandat 483.901 kb on - strandat 484.031 kb on + strand, within MPMX20_00467at 484.031 kb on + strand, within MPMX20_00467at 484.031 kb on + strand, within MPMX20_00467at 484.034 kb on - strand, within MPMX20_00467at 484.048 kb on + strand, within MPMX20_00467at 484.150 kb on + strand, within MPMX20_00467at 484.153 kb on - strand, within MPMX20_00467at 484.227 kb on + strand, within MPMX20_00467at 484.271 kb on + strand, within MPMX20_00467at 484.320 kb on + strand, within MPMX20_00467at 484.321 kb on - strand, within MPMX20_00467at 484.328 kb on - strand, within MPMX20_00467at 484.328 kb on - strand, within MPMX20_00467at 484.349 kb on - strand, within MPMX20_00467at 484.439 kb on + strand, within MPMX20_00467at 484.465 kb on + strand, within MPMX20_00467at 484.528 kb on + strandat 484.586 kb on - strandat 484.590 kb on - strandat 484.620 kb on - strandat 484.663 kb on - strand, within MPMX20_00468at 484.702 kb on - strand, within MPMX20_00468at 484.702 kb on - strand, within MPMX20_00468at 484.707 kb on + strand, within MPMX20_00468at 484.707 kb on + strand, within MPMX20_00468at 484.759 kb on + strand, within MPMX20_00468at 484.782 kb on - strand, within MPMX20_00468at 484.842 kb on + strand, within MPMX20_00468at 484.851 kb on + strand, within MPMX20_00468at 484.859 kb on - strand, within MPMX20_00468at 484.861 kb on - strand, within MPMX20_00468at 484.919 kb on - strand, within MPMX20_00468at 484.996 kb on - strand, within MPMX20_00468at 485.022 kb on + strand, within MPMX20_00468at 485.022 kb on + strand, within MPMX20_00468at 485.022 kb on + strand, within MPMX20_00468at 485.042 kb on - strand, within MPMX20_00468at 485.052 kb on - strand, within MPMX20_00468at 485.052 kb on - strand, within MPMX20_00468at 485.052 kb on - strand, within MPMX20_00468at 485.126 kb on + strand, within MPMX20_00468at 485.150 kb on + strand, within MPMX20_00468at 485.200 kb on + strand, within MPMX20_00468at 485.262 kb on + strandat 485.270 kb on - strandat 485.270 kb on - strandat 485.277 kb on + strandat 485.309 kb on + strandat 485.410 kb on + strandat 485.425 kb on - strandat 485.451 kb on - strandat 485.456 kb on + strandat 485.459 kb on - strandat 485.461 kb on + strandat 485.464 kb on - strandat 485.476 kb on - strandat 485.488 kb on - strandat 485.488 kb on - strandat 485.550 kb on - strand, within MPMX20_00469at 485.564 kb on + strand, within MPMX20_00469at 485.564 kb on + strand, within MPMX20_00469at 485.572 kb on - strand, within MPMX20_00469at 485.572 kb on - strand, within MPMX20_00469at 485.637 kb on - strand, within MPMX20_00469at 485.669 kb on + strand, within MPMX20_00469at 485.702 kb on + strand, within MPMX20_00469at 485.713 kb on - strand, within MPMX20_00469at 485.780 kb on + strand, within MPMX20_00469at 485.803 kb on - strand, within MPMX20_00469at 485.803 kb on - strand, within MPMX20_00469at 485.829 kb on + strand, within MPMX20_00469at 485.837 kb on - strand, within MPMX20_00469at 485.887 kb on - strand, within MPMX20_00469at 485.928 kb on - strand, within MPMX20_00469at 485.934 kb on - strand, within MPMX20_00469at 485.945 kb on + strand, within MPMX20_00469at 485.950 kb on + strand, within MPMX20_00469at 485.953 kb on - strand, within MPMX20_00469at 485.953 kb on - strand, within MPMX20_00469at 485.953 kb on - strand, within MPMX20_00469at 485.975 kb on - strand, within MPMX20_00469at 486.045 kb on + strand, within MPMX20_00469at 486.060 kb on + strand, within MPMX20_00469at 486.060 kb on + strand, within MPMX20_00469at 486.068 kb on - strand, within MPMX20_00469at 486.068 kb on - strand, within MPMX20_00469at 486.163 kb on + strand, within MPMX20_00469at 486.215 kb on + strand, within MPMX20_00469at 486.285 kb on - strand, within MPMX20_00469

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Per-strain Table

Position Strand Gene LocusTag Fraction Xylitol (C)
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483,586 + MPMX20_00466 0.67 -2.2
483,594 - MPMX20_00466 0.69 -2.0
483,618 + MPMX20_00466 0.77 +0.1
483,626 - MPMX20_00466 0.80 +0.1
483,646 + MPMX20_00466 0.86 -0.1
483,647 - MPMX20_00466 0.86 -1.0
483,677 + +0.8
483,711 + -0.1
483,711 + +0.3
483,714 - +1.1
483,719 - +0.7
483,719 - -2.6
483,754 + -2.5
483,762 - +1.1
483,762 - +0.0
483,806 + -1.9
483,814 - -2.9
483,814 - +2.1
483,828 + -1.5
483,841 - +0.1
483,859 + -3.4
483,901 - +1.9
484,031 + MPMX20_00467 0.25 -0.2
484,031 + MPMX20_00467 0.25 -3.5
484,031 + MPMX20_00467 0.25 +0.6
484,034 - MPMX20_00467 0.26 -1.3
484,048 + MPMX20_00467 0.28 +0.5
484,150 + MPMX20_00467 0.42 -1.4
484,153 - MPMX20_00467 0.42 -1.6
484,227 + MPMX20_00467 0.53 +0.4
484,271 + MPMX20_00467 0.59 -0.2
484,320 + MPMX20_00467 0.65 -1.2
484,321 - MPMX20_00467 0.66 -2.3
484,328 - MPMX20_00467 0.67 +0.4
484,328 - MPMX20_00467 0.67 +1.6
484,349 - MPMX20_00467 0.69 +1.3
484,439 + MPMX20_00467 0.82 -2.8
484,465 + MPMX20_00467 0.85 -2.3
484,528 + -0.8
484,586 - +0.5
484,590 - -2.2
484,620 - -0.7
484,663 - MPMX20_00468 0.13 -3.7
484,702 - MPMX20_00468 0.18 -2.7
484,702 - MPMX20_00468 0.18 -1.8
484,707 + MPMX20_00468 0.19 -0.5
484,707 + MPMX20_00468 0.19 -3.1
484,759 + MPMX20_00468 0.26 -0.6
484,782 - MPMX20_00468 0.29 +0.7
484,842 + MPMX20_00468 0.37 -2.8
484,851 + MPMX20_00468 0.38 -2.0
484,859 - MPMX20_00468 0.39 -1.0
484,861 - MPMX20_00468 0.39 -2.4
484,919 - MPMX20_00468 0.47 -1.3
484,996 - MPMX20_00468 0.57 +0.5
485,022 + MPMX20_00468 0.60 -1.5
485,022 + MPMX20_00468 0.60 -2.1
485,022 + MPMX20_00468 0.60 -2.8
485,042 - MPMX20_00468 0.63 -3.7
485,052 - MPMX20_00468 0.64 -0.0
485,052 - MPMX20_00468 0.64 +1.0
485,052 - MPMX20_00468 0.64 -2.6
485,126 + MPMX20_00468 0.74 -2.0
485,150 + MPMX20_00468 0.77 -0.7
485,200 + MPMX20_00468 0.84 -3.0
485,262 + +0.4
485,270 - +2.5
485,270 - -3.0
485,277 + +1.3
485,309 + -1.0
485,410 + +1.3
485,425 - +0.8
485,451 - +2.2
485,456 + -1.1
485,459 - -0.3
485,461 + -1.5
485,464 - +0.9
485,476 - +2.6
485,488 - +2.1
485,488 - -0.3
485,550 - MPMX20_00469 0.11 +0.0
485,564 + MPMX20_00469 0.12 -0.9
485,564 + MPMX20_00469 0.12 +1.3
485,572 - MPMX20_00469 0.13 -0.9
485,572 - MPMX20_00469 0.13 -1.1
485,637 - MPMX20_00469 0.19 -1.0
485,669 + MPMX20_00469 0.22 +0.6
485,702 + MPMX20_00469 0.25 -1.2
485,713 - MPMX20_00469 0.26 -0.8
485,780 + MPMX20_00469 0.33 +2.1
485,803 - MPMX20_00469 0.35 -1.5
485,803 - MPMX20_00469 0.35 -2.9
485,829 + MPMX20_00469 0.37 -0.1
485,837 - MPMX20_00469 0.38 -0.6
485,887 - MPMX20_00469 0.43 -3.2
485,928 - MPMX20_00469 0.46 -2.7
485,934 - MPMX20_00469 0.47 -2.8
485,945 + MPMX20_00469 0.48 +1.4
485,950 + MPMX20_00469 0.49 -2.2
485,953 - MPMX20_00469 0.49 +0.6
485,953 - MPMX20_00469 0.49 +2.4
485,953 - MPMX20_00469 0.49 +1.9
485,975 - MPMX20_00469 0.51 +0.5
486,045 + MPMX20_00469 0.57 +1.1
486,060 + MPMX20_00469 0.59 -1.6
486,060 + MPMX20_00469 0.59 +0.5
486,068 - MPMX20_00469 0.60 -0.1
486,068 - MPMX20_00469 0.60 -3.1
486,163 + MPMX20_00469 0.69 -1.4
486,215 + MPMX20_00469 0.73 -1.0
486,285 - MPMX20_00469 0.80 +1.8

Or see this region's nucleotide sequence