Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00057

Experiment: Formate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate (C)
55,288	-		MPMX20_00056	0.27	+1.5
55,290	-		MPMX20_00056	0.27	-0.1
55,323	+		MPMX20_00056	0.30	-0.3
55,400	+		MPMX20_00056	0.35	-1.8
55,467	+		MPMX20_00056	0.40	-0.8
55,530	-		MPMX20_00056	0.45	-3.5
55,630	+		MPMX20_00056	0.52	-0.0
55,701	+		MPMX20_00056	0.58	-0.1
55,729	+		MPMX20_00056	0.60	-1.4
55,739	+		MPMX20_00056	0.60	+0.8
55,875	+		MPMX20_00056	0.70	+0.7
55,886	+		MPMX20_00056	0.71	-0.8
55,909	+		MPMX20_00056	0.73	-0.9
55,909	+		MPMX20_00056	0.73	+1.0
55,922	+		MPMX20_00056	0.74	-0.8
55,967	-		MPMX20_00056	0.77	-0.2
55,977	+		MPMX20_00056	0.78	-0.1
55,978	+		MPMX20_00056	0.78	+1.7
56,010	-		MPMX20_00056	0.80	-0.8
56,029	-		MPMX20_00056	0.82	+1.2
56,209	+				+0.4
56,229	+				+2.6
56,230	+				+1.9
56,234	+				+2.0
56,253	-				+1.3
56,257	+				-0.5
56,257	+				-0.4
56,257	+				-1.2
56,265	-				+0.3
56,342	-				+0.2
56,423	-				-0.1
56,423	-				-0.0
56,423	-				+0.1
56,447	+				-0.0
56,447	+				-0.1
56,455	-				-0.3
56,493	-				+0.7
56,507	-				-0.9
56,507	-				-0.8
56,514	-				-2.2
56,605	+		MPMX20_00057	0.10	-2.6
56,671	+		MPMX20_00057	0.13	+0.2
56,681	+		MPMX20_00057	0.13	+2.0
56,714	+		MPMX20_00057	0.14	-1.2
56,733	-		MPMX20_00057	0.15	-2.6
56,761	+		MPMX20_00057	0.15	-2.0
56,840	-		MPMX20_00057	0.18	+1.1
56,882	-		MPMX20_00057	0.19	-1.9
56,905	+		MPMX20_00057	0.20	+0.3
56,970	-		MPMX20_00057	0.22	+3.1
57,008	+		MPMX20_00057	0.23	-0.5
57,016	-		MPMX20_00057	0.24	-0.1
57,040	+		MPMX20_00057	0.24	+1.5
57,150	-		MPMX20_00057	0.28	-1.2
57,158	+		MPMX20_00057	0.28	-3.1
57,179	+		MPMX20_00057	0.29	+0.8
57,192	-		MPMX20_00057	0.29	-0.4
57,207	-		MPMX20_00057	0.30	+0.5
57,207	-		MPMX20_00057	0.30	+0.7
57,266	+		MPMX20_00057	0.32	-0.2
57,274	-		MPMX20_00057	0.32	-0.3
57,276	+		MPMX20_00057	0.32	-1.3
57,353	-		MPMX20_00057	0.34	+0.3
57,360	+		MPMX20_00057	0.35	-3.3
57,367	+		MPMX20_00057	0.35	-0.9
57,368	-		MPMX20_00057	0.35	-2.3
57,377	+		MPMX20_00057	0.35	-0.4
57,443	+		MPMX20_00057	0.37	-1.3
57,448	-		MPMX20_00057	0.38	+2.1
57,460	+		MPMX20_00057	0.38	+1.0
57,516	+		MPMX20_00057	0.40	-1.0
57,524	-		MPMX20_00057	0.40	+0.5
57,561	+		MPMX20_00057	0.41	-0.7
57,569	-		MPMX20_00057	0.41	-3.2
57,604	+		MPMX20_00057	0.43	-0.9
57,675	+		MPMX20_00057	0.45	+0.3
57,675	+		MPMX20_00057	0.45	+1.3
57,679	-		MPMX20_00057	0.45	+1.6
57,710	+		MPMX20_00057	0.46	+1.0
57,754	+		MPMX20_00057	0.47	+1.6
57,762	-		MPMX20_00057	0.48	-3.2
57,762	-		MPMX20_00057	0.48	+1.6
57,762	-		MPMX20_00057	0.48	-0.4
57,762	-		MPMX20_00057	0.48	-0.9
57,764	-		MPMX20_00057	0.48	-0.5
57,769	-		MPMX20_00057	0.48	+0.1
57,785	+		MPMX20_00057	0.48	+0.2
57,833	-		MPMX20_00057	0.50	-0.9
57,843	-		MPMX20_00057	0.50	+0.6
57,894	+		MPMX20_00057	0.52	-0.1
57,899	+		MPMX20_00057	0.52	+1.6
57,970	-		MPMX20_00057	0.54	+0.3
58,036	+		MPMX20_00057	0.56	-0.0
58,057	-		MPMX20_00057	0.57	+1.3
58,126	+		MPMX20_00057	0.59	-0.3
58,180	+		MPMX20_00057	0.61	+1.0
58,203	-		MPMX20_00057	0.62	-1.1
58,205	+		MPMX20_00057	0.62	-0.5
58,205	+		MPMX20_00057	0.62	-1.3
58,205	+		MPMX20_00057	0.62	+0.8
58,213	-		MPMX20_00057	0.62	+2.1
58,244	+		MPMX20_00057	0.63	-1.2
58,244	+		MPMX20_00057	0.63	-1.5
58,244	+		MPMX20_00057	0.63	+0.5
58,244	+		MPMX20_00057	0.63	+1.3
58,252	+		MPMX20_00057	0.63	+0.2
58,252	-		MPMX20_00057	0.63	+1.9
58,252	-		MPMX20_00057	0.63	-2.7
58,328	+		MPMX20_00057	0.66	+0.4
58,412	-		MPMX20_00057	0.69	+0.9
58,421	+		MPMX20_00057	0.69	-0.5
58,421	+		MPMX20_00057	0.69	-0.2
58,422	+		MPMX20_00057	0.69	-0.4
58,424	-		MPMX20_00057	0.69	+2.5
58,429	-		MPMX20_00057	0.69	+1.1
58,429	-		MPMX20_00057	0.69	+0.4
58,429	-		MPMX20_00057	0.69	-0.1
58,429	-		MPMX20_00057	0.69	-2.6
58,430	-		MPMX20_00057	0.69	-0.1
58,491	-		MPMX20_00057	0.71	-0.3
58,491	-		MPMX20_00057	0.71	-1.6
58,493	+		MPMX20_00057	0.71	-0.0
58,555	-		MPMX20_00057	0.73	-1.3
58,569	-		MPMX20_00057	0.74	-0.3
58,575	+		MPMX20_00057	0.74	+0.1
58,583	-		MPMX20_00057	0.74	-0.1
58,618	+		MPMX20_00057	0.75	-0.3
58,618	-		MPMX20_00057	0.75	+0.2
58,626	-		MPMX20_00057	0.75	-0.6
58,739	-		MPMX20_00057	0.79	-2.6
58,741	+		MPMX20_00057	0.79	-1.9
58,754	-		MPMX20_00057	0.80	+3.8
58,833	-		MPMX20_00057	0.82	-2.0
58,833	-		MPMX20_00057	0.82	-1.2
58,867	-		MPMX20_00057	0.83	+1.1
58,867	-		MPMX20_00057	0.83	-0.1
58,867	-		MPMX20_00057	0.83	+0.8
58,867	-		MPMX20_00057	0.83	+1.8
58,876	+		MPMX20_00057	0.83	-1.4
58,932	-		MPMX20_00057	0.85	+0.2
58,966	+		MPMX20_00057	0.86	+0.6
59,011	-		MPMX20_00057	0.88	-2.0
59,011	-		MPMX20_00057	0.88	+1.2
59,011	-		MPMX20_00057	0.88	-0.0
59,018	+		MPMX20_00057	0.88	+0.6
59,018	+		MPMX20_00057	0.88	+0.3
59,018	+		MPMX20_00057	0.88	+2.4
59,026	-		MPMX20_00057	0.88	-0.6
59,059	-		MPMX20_00057	0.89	+0.2
59,068	+		MPMX20_00057	0.90	-1.0
59,069	+		MPMX20_00057	0.90	-0.1
59,076	-		MPMX20_00057	0.90	-1.3
59,091	-				-1.6
59,095	+				-1.4
59,163	-				-0.3
59,172	-				+0.4
59,204	-				-0.6
59,204	-				-1.0
59,300	+				+0.9
59,300	+				-1.0
59,308	-				+1.1
59,308	-				-0.4
59,308	-				+5.0
59,360	-				-0.3
59,449	+				-1.2
59,450	-				+0.5
59,474	-				+0.7
59,568	+		MPMX20_00058	0.16	+0.9
59,576	-		MPMX20_00058	0.17	+0.3
59,599	-		MPMX20_00058	0.19	+0.6
59,599	-		MPMX20_00058	0.19	-0.7
59,610	+		MPMX20_00058	0.20	+0.1
59,618	-		MPMX20_00058	0.20	-0.4
59,623	+		MPMX20_00058	0.21	-2.0
59,625	-		MPMX20_00058	0.21	+0.7
59,696	-		MPMX20_00058	0.27	+0.7
59,730	-		MPMX20_00058	0.30	-2.0
59,731	+		MPMX20_00058	0.30	-3.7
59,800	+		MPMX20_00058	0.37	+1.1
59,806	-		MPMX20_00058	0.37	+1.1
59,819	+		MPMX20_00058	0.38	+0.4
59,942	-		MPMX20_00058	0.49	-0.4
59,942	-		MPMX20_00058	0.49	-1.5
59,942	-		MPMX20_00058	0.49	-2.3
59,942	-		MPMX20_00058	0.49	-1.5
59,942	-		MPMX20_00058	0.49	+0.8
59,946	+		MPMX20_00058	0.50	-0.9
59,946	+		MPMX20_00058	0.50	-0.0
59,946	+		MPMX20_00058	0.50	-1.2
59,954	-		MPMX20_00058	0.50	-1.5
59,954	-		MPMX20_00058	0.50	-1.0
59,954	-		MPMX20_00058	0.50	-1.2
59,959	+		MPMX20_00058	0.51	+0.6
59,969	-		MPMX20_00058	0.52	-1.2
60,018	-		MPMX20_00058	0.56	-0.6
60,020	+		MPMX20_00058	0.56	-0.2
60,023	-		MPMX20_00058	0.56	-1.3
60,024	+		MPMX20_00058	0.57	-1.1
60,028	-		MPMX20_00058	0.57	-0.6
60,041	+		MPMX20_00058	0.58	-2.9
60,049	-		MPMX20_00058	0.59	+0.4
60,049	-		MPMX20_00058	0.59	+1.5
60,061	+		MPMX20_00058	0.60	-3.0
60,072	+		MPMX20_00058	0.61	+0.8
60,072	+		MPMX20_00058	0.61	+0.1
60,072	+		MPMX20_00058	0.61	-2.8
60,072	+		MPMX20_00058	0.61	+0.3
60,072	+		MPMX20_00058	0.61	-2.2
60,072	+		MPMX20_00058	0.61	-2.8
60,080	-		MPMX20_00058	0.61	-2.0
60,085	-		MPMX20_00058	0.62	+0.2
60,140	-		MPMX20_00058	0.67	-2.4
60,142	+		MPMX20_00058	0.67	-2.0
60,142	+		MPMX20_00058	0.67	+0.5
60,147	+		MPMX20_00058	0.67	-0.3
60,147	+		MPMX20_00058	0.67	-1.1
60,152	+		MPMX20_00058	0.68	+3.1
60,152	+		MPMX20_00058	0.68	+0.8
60,160	-		MPMX20_00058	0.69	+1.1
60,167	-		MPMX20_00058	0.69	+0.1
60,174	+		MPMX20_00058	0.70	+1.4
60,182	-		MPMX20_00058	0.71	+0.2
60,182	-		MPMX20_00058	0.71	+0.3
60,249	+		MPMX20_00058	0.77	-1.0
60,277	-		MPMX20_00058	0.79	-0.4
60,322	+		MPMX20_00058	0.83	-1.0
60,322	+		MPMX20_00058	0.83	-0.6
60,322	+		MPMX20_00058	0.83	+0.1
60,330	-		MPMX20_00058	0.84	+0.3
60,330	-		MPMX20_00058	0.84	+0.3
60,330	-		MPMX20_00058	0.84	-1.0
60,334	+		MPMX20_00058	0.84	+1.4
60,334	+		MPMX20_00058	0.84	+0.8
60,337	-		MPMX20_00058	0.84	-3.0
60,342	-		MPMX20_00058	0.85	-0.9
60,342	-		MPMX20_00058	0.85	+0.4
60,342	-		MPMX20_00058	0.85	+1.7
60,344	+		MPMX20_00058	0.85	+1.2
60,344	+		MPMX20_00058	0.85	-1.7
60,351	+		MPMX20_00058	0.86	-2.9
60,360	+		MPMX20_00058	0.86	+1.1
60,370	+		MPMX20_00058	0.87	-0.5