Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04563 and MPMX20_04564 overlap by 4 nucleotides MPMX20_04564 and MPMX20_04565 are separated by 109 nucleotides MPMX20_04565 and MPMX20_04566 are separated by 27 nucleotides
MPMX20_04563: MPMX20_04563 - L-Rhamnulokinase, at 4,774,702 to 4,776,171
_04563
MPMX20_04564: MPMX20_04564 - L-rhamnose isomerase, at 4,776,168 to 4,777,427
_04564
MPMX20_04565: MPMX20_04565 - Rhamnulose-1-phosphate aldolase, at 4,777,537 to 4,778,367
_04565
MPMX20_04566: MPMX20_04566 - L-rhamnose mutarotase, at 4,778,395 to 4,778,709
_04566
Position (kb)
4776
4777
4778 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 4775.173 kb on + strand, within MPMX20_04563 at 4775.173 kb on - strand, within MPMX20_04563 at 4775.200 kb on + strand, within MPMX20_04563 at 4775.261 kb on - strand, within MPMX20_04563 at 4775.276 kb on + strand, within MPMX20_04563 at 4775.292 kb on + strand, within MPMX20_04563 at 4775.300 kb on - strand, within MPMX20_04563 at 4775.381 kb on - strand, within MPMX20_04563 at 4775.509 kb on + strand, within MPMX20_04563 at 4775.568 kb on + strand, within MPMX20_04563 at 4775.615 kb on - strand, within MPMX20_04563 at 4775.644 kb on - strand, within MPMX20_04563 at 4775.764 kb on + strand, within MPMX20_04563 at 4775.765 kb on + strand, within MPMX20_04563 at 4775.839 kb on + strand, within MPMX20_04563 at 4775.840 kb on - strand, within MPMX20_04563 at 4775.840 kb on - strand, within MPMX20_04563 at 4775.840 kb on - strand, within MPMX20_04563 at 4775.954 kb on + strand, within MPMX20_04563 at 4776.020 kb on - strand, within MPMX20_04563 at 4776.209 kb on + strand at 4776.217 kb on - strand at 4776.238 kb on + strand at 4776.278 kb on - strand at 4776.323 kb on - strand, within MPMX20_04564 at 4776.382 kb on + strand, within MPMX20_04564 at 4776.400 kb on + strand, within MPMX20_04564 at 4776.407 kb on - strand, within MPMX20_04564 at 4776.412 kb on + strand, within MPMX20_04564 at 4776.517 kb on + strand, within MPMX20_04564 at 4776.598 kb on + strand, within MPMX20_04564 at 4776.598 kb on + strand, within MPMX20_04564 at 4776.598 kb on + strand, within MPMX20_04564 at 4776.606 kb on - strand, within MPMX20_04564 at 4776.606 kb on - strand, within MPMX20_04564 at 4776.643 kb on - strand, within MPMX20_04564 at 4776.650 kb on + strand, within MPMX20_04564 at 4776.650 kb on + strand, within MPMX20_04564 at 4776.679 kb on + strand, within MPMX20_04564 at 4776.680 kb on - strand, within MPMX20_04564 at 4776.700 kb on - strand, within MPMX20_04564 at 4776.747 kb on + strand, within MPMX20_04564 at 4776.800 kb on - strand, within MPMX20_04564 at 4776.838 kb on - strand, within MPMX20_04564 at 4776.862 kb on - strand, within MPMX20_04564 at 4776.867 kb on - strand, within MPMX20_04564 at 4776.880 kb on + strand, within MPMX20_04564 at 4776.880 kb on - strand, within MPMX20_04564 at 4776.914 kb on - strand, within MPMX20_04564 at 4776.998 kb on + strand, within MPMX20_04564 at 4777.080 kb on + strand, within MPMX20_04564 at 4777.209 kb on + strand, within MPMX20_04564 at 4777.365 kb on - strand at 4777.441 kb on - strand at 4777.462 kb on + strand at 4777.470 kb on + strand at 4777.470 kb on + strand at 4777.470 kb on - strand at 4777.480 kb on - strand at 4777.562 kb on - strand at 4777.562 kb on - strand at 4777.572 kb on - strand at 4777.617 kb on + strand at 4777.625 kb on + strand, within MPMX20_04565 at 4777.658 kb on + strand, within MPMX20_04565 at 4777.666 kb on - strand, within MPMX20_04565 at 4777.667 kb on - strand, within MPMX20_04565 at 4777.708 kb on - strand, within MPMX20_04565 at 4777.802 kb on + strand, within MPMX20_04565 at 4777.810 kb on - strand, within MPMX20_04565 at 4777.812 kb on + strand, within MPMX20_04565 at 4777.837 kb on + strand, within MPMX20_04565 at 4777.841 kb on + strand, within MPMX20_04565 at 4777.841 kb on + strand, within MPMX20_04565 at 4777.845 kb on - strand, within MPMX20_04565 at 4777.876 kb on - strand, within MPMX20_04565 at 4777.880 kb on + strand, within MPMX20_04565 at 4777.880 kb on + strand, within MPMX20_04565 at 4777.888 kb on - strand, within MPMX20_04565 at 4777.888 kb on - strand, within MPMX20_04565 at 4777.888 kb on - strand, within MPMX20_04565 at 4777.899 kb on + strand, within MPMX20_04565 at 4777.899 kb on + strand, within MPMX20_04565 at 4777.899 kb on + strand, within MPMX20_04565 at 4777.933 kb on - strand, within MPMX20_04565 at 4777.951 kb on + strand, within MPMX20_04565 at 4777.981 kb on + strand, within MPMX20_04565 at 4777.989 kb on - strand, within MPMX20_04565 at 4778.085 kb on + strand, within MPMX20_04565 at 4778.116 kb on + strand, within MPMX20_04565 at 4778.176 kb on + strand, within MPMX20_04565 at 4778.176 kb on + strand, within MPMX20_04565 at 4778.184 kb on - strand, within MPMX20_04565 at 4778.184 kb on - strand, within MPMX20_04565 at 4778.220 kb on - strand, within MPMX20_04565 at 4778.245 kb on - strand, within MPMX20_04565 at 4778.245 kb on - strand, within MPMX20_04565 at 4778.281 kb on - strand, within MPMX20_04565 at 4778.415 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 4,775,173 + MPMX20_04563 0.32 -1.1 4,775,173 - MPMX20_04563 0.32 +3.7 4,775,200 + MPMX20_04563 0.34 -2.4 4,775,261 - MPMX20_04563 0.38 -1.7 4,775,276 + MPMX20_04563 0.39 -3.5 4,775,292 + MPMX20_04563 0.40 -3.3 4,775,300 - MPMX20_04563 0.41 +1.7 4,775,381 - MPMX20_04563 0.46 +0.4 4,775,509 + MPMX20_04563 0.55 -0.4 4,775,568 + MPMX20_04563 0.59 -0.2 4,775,615 - MPMX20_04563 0.62 -3.9 4,775,644 - MPMX20_04563 0.64 -0.9 4,775,764 + MPMX20_04563 0.72 +1.1 4,775,765 + MPMX20_04563 0.72 -0.8 4,775,839 + MPMX20_04563 0.77 +1.9 4,775,840 - MPMX20_04563 0.77 -0.5 4,775,840 - MPMX20_04563 0.77 -0.2 4,775,840 - MPMX20_04563 0.77 -2.7 4,775,954 + MPMX20_04563 0.85 -0.2 4,776,020 - MPMX20_04563 0.90 -1.3 4,776,209 + +0.8 4,776,217 - +2.0 4,776,238 + +2.6 4,776,278 - -1.3 4,776,323 - MPMX20_04564 0.12 +2.0 4,776,382 + MPMX20_04564 0.17 +0.2 4,776,400 + MPMX20_04564 0.18 +0.5 4,776,407 - MPMX20_04564 0.19 -2.8 4,776,412 + MPMX20_04564 0.19 +1.2 4,776,517 + MPMX20_04564 0.28 -2.2 4,776,598 + MPMX20_04564 0.34 -1.7 4,776,598 + MPMX20_04564 0.34 -3.4 4,776,598 + MPMX20_04564 0.34 +1.4 4,776,606 - MPMX20_04564 0.35 +0.6 4,776,606 - MPMX20_04564 0.35 -3.2 4,776,643 - MPMX20_04564 0.38 -1.3 4,776,650 + MPMX20_04564 0.38 +0.0 4,776,650 + MPMX20_04564 0.38 +2.1 4,776,679 + MPMX20_04564 0.41 +0.8 4,776,680 - MPMX20_04564 0.41 +0.2 4,776,700 - MPMX20_04564 0.42 -3.5 4,776,747 + MPMX20_04564 0.46 -2.9 4,776,800 - MPMX20_04564 0.50 +3.1 4,776,838 - MPMX20_04564 0.53 -0.6 4,776,862 - MPMX20_04564 0.55 +1.1 4,776,867 - MPMX20_04564 0.55 +0.5 4,776,880 + MPMX20_04564 0.57 -1.0 4,776,880 - MPMX20_04564 0.57 +1.1 4,776,914 - MPMX20_04564 0.59 +2.2 4,776,998 + MPMX20_04564 0.66 +0.2 4,777,080 + MPMX20_04564 0.72 +2.7 4,777,209 + MPMX20_04564 0.83 +3.0 4,777,365 - -0.3 4,777,441 - +1.5 4,777,462 + -4.1 4,777,470 + -0.3 4,777,470 + -1.9 4,777,470 - -1.5 4,777,480 - -1.6 4,777,562 - -1.3 4,777,562 - -0.2 4,777,572 - +1.3 4,777,617 + -0.5 4,777,625 + MPMX20_04565 0.11 +0.4 4,777,658 + MPMX20_04565 0.15 -0.8 4,777,666 - MPMX20_04565 0.16 +1.1 4,777,667 - MPMX20_04565 0.16 +1.5 4,777,708 - MPMX20_04565 0.21 +0.6 4,777,802 + MPMX20_04565 0.32 +0.3 4,777,810 - MPMX20_04565 0.33 -2.2 4,777,812 + MPMX20_04565 0.33 -1.8 4,777,837 + MPMX20_04565 0.36 +2.9 4,777,841 + MPMX20_04565 0.37 +1.8 4,777,841 + MPMX20_04565 0.37 -0.2 4,777,845 - MPMX20_04565 0.37 -0.5 4,777,876 - MPMX20_04565 0.41 -0.5 4,777,880 + MPMX20_04565 0.41 -0.9 4,777,880 + MPMX20_04565 0.41 -0.7 4,777,888 - MPMX20_04565 0.42 +2.4 4,777,888 - MPMX20_04565 0.42 +0.6 4,777,888 - MPMX20_04565 0.42 -1.6 4,777,899 + MPMX20_04565 0.44 -0.8 4,777,899 + MPMX20_04565 0.44 +1.6 4,777,899 + MPMX20_04565 0.44 -0.9 4,777,933 - MPMX20_04565 0.48 -2.2 4,777,951 + MPMX20_04565 0.50 +1.5 4,777,981 + MPMX20_04565 0.53 -0.4 4,777,989 - MPMX20_04565 0.54 +0.2 4,778,085 + MPMX20_04565 0.66 -1.3 4,778,116 + MPMX20_04565 0.70 +0.3 4,778,176 + MPMX20_04565 0.77 +0.7 4,778,176 + MPMX20_04565 0.77 -2.6 4,778,184 - MPMX20_04565 0.78 +0.8 4,778,184 - MPMX20_04565 0.78 +1.9 4,778,220 - MPMX20_04565 0.82 +1.7 4,778,245 - MPMX20_04565 0.85 -3.1 4,778,245 - MPMX20_04565 0.85 +0.1 4,778,281 - MPMX20_04565 0.90 +0.0 4,778,415 - -1.3
Or see this region's nucleotide sequence