Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03304

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03303 and MPMX20_03304 overlap by 4 nucleotidesMPMX20_03304 and MPMX20_03305 are separated by 1 nucleotides MPMX20_03303: MPMX20_03303 - hypothetical protein, at 3,471,728 to 3,472,723 _03303 MPMX20_03304: MPMX20_03304 - hypothetical protein, at 3,472,720 to 3,472,935 _03304 MPMX20_03305: MPMX20_03305 - DNA ligase, at 3,472,937 to 3,474,952 _03305 Position (kb) 3472 3473Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3471.759 kb on + strandat 3471.787 kb on - strandat 3471.788 kb on + strandat 3471.816 kb on - strandat 3471.835 kb on + strand, within MPMX20_03303at 3471.859 kb on + strand, within MPMX20_03303at 3471.943 kb on + strand, within MPMX20_03303at 3471.961 kb on + strand, within MPMX20_03303at 3472.032 kb on + strand, within MPMX20_03303at 3472.064 kb on - strand, within MPMX20_03303at 3472.119 kb on + strand, within MPMX20_03303at 3472.171 kb on - strand, within MPMX20_03303at 3472.186 kb on + strand, within MPMX20_03303at 3472.397 kb on - strand, within MPMX20_03303at 3472.404 kb on - strand, within MPMX20_03303at 3472.429 kb on + strand, within MPMX20_03303at 3472.434 kb on + strand, within MPMX20_03303at 3472.437 kb on - strand, within MPMX20_03303at 3472.442 kb on - strand, within MPMX20_03303at 3472.461 kb on + strand, within MPMX20_03303at 3472.543 kb on - strand, within MPMX20_03303at 3472.660 kb on - strandat 3472.710 kb on - strandat 3472.763 kb on + strand, within MPMX20_03304at 3472.763 kb on + strand, within MPMX20_03304at 3472.771 kb on - strand, within MPMX20_03304at 3472.771 kb on - strand, within MPMX20_03304at 3472.771 kb on - strand, within MPMX20_03304at 3472.771 kb on - strand, within MPMX20_03304at 3472.785 kb on - strand, within MPMX20_03304at 3472.944 kb on + strandat 3472.952 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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3,471,759 + -2.7
3,471,787 - +1.5
3,471,788 + -2.4
3,471,816 - +0.7
3,471,835 + MPMX20_03303 0.11 -3.3
3,471,859 + MPMX20_03303 0.13 -0.0
3,471,943 + MPMX20_03303 0.22 +0.3
3,471,961 + MPMX20_03303 0.23 +0.5
3,472,032 + MPMX20_03303 0.31 +1.0
3,472,064 - MPMX20_03303 0.34 -2.1
3,472,119 + MPMX20_03303 0.39 -1.7
3,472,171 - MPMX20_03303 0.44 -0.6
3,472,186 + MPMX20_03303 0.46 -2.4
3,472,397 - MPMX20_03303 0.67 -2.5
3,472,404 - MPMX20_03303 0.68 -1.1
3,472,429 + MPMX20_03303 0.70 +1.3
3,472,434 + MPMX20_03303 0.71 +0.4
3,472,437 - MPMX20_03303 0.71 +0.2
3,472,442 - MPMX20_03303 0.72 -1.0
3,472,461 + MPMX20_03303 0.74 -0.9
3,472,543 - MPMX20_03303 0.82 +1.1
3,472,660 - -0.1
3,472,710 - -0.5
3,472,763 + MPMX20_03304 0.20 -0.2
3,472,763 + MPMX20_03304 0.20 -2.9
3,472,771 - MPMX20_03304 0.24 -1.7
3,472,771 - MPMX20_03304 0.24 -2.1
3,472,771 - MPMX20_03304 0.24 +2.2
3,472,771 - MPMX20_03304 0.24 -2.5
3,472,785 - MPMX20_03304 0.30 -1.4
3,472,944 + -0.2
3,472,952 - -2.2

Or see this region's nucleotide sequence