Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02179 and MPMX20_02180 overlap by 1 nucleotides MPMX20_02180 and MPMX20_02181 are separated by 2 nucleotides MPMX20_02181 and MPMX20_02182 are separated by 4 nucleotides MPMX20_02182 and MPMX20_02183 are separated by 99 nucleotides
MPMX20_02179: MPMX20_02179 - hypothetical protein, at 2,269,400 to 2,269,921
_02179
MPMX20_02180: MPMX20_02180 - hypothetical protein, at 2,269,921 to 2,270,448
_02180
MPMX20_02181: MPMX20_02181 - hypothetical protein, at 2,270,451 to 2,270,921
_02181
MPMX20_02182: MPMX20_02182 - hypothetical protein, at 2,270,926 to 2,271,360
_02182
MPMX20_02183: MPMX20_02183 - HTH-type transcriptional regulator DmlR, at 2,271,460 to 2,272,392
_02183
Position (kb)
2270
2271 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2269.476 kb on - strand, within MPMX20_02179 at 2269.493 kb on + strand, within MPMX20_02179 at 2269.501 kb on - strand, within MPMX20_02179 at 2269.506 kb on - strand, within MPMX20_02179 at 2269.531 kb on + strand, within MPMX20_02179 at 2269.547 kb on - strand, within MPMX20_02179 at 2269.603 kb on + strand, within MPMX20_02179 at 2269.629 kb on - strand, within MPMX20_02179 at 2269.657 kb on - strand, within MPMX20_02179 at 2269.713 kb on + strand, within MPMX20_02179 at 2269.761 kb on + strand, within MPMX20_02179 at 2269.766 kb on + strand, within MPMX20_02179 at 2269.769 kb on - strand, within MPMX20_02179 at 2269.831 kb on - strand, within MPMX20_02179 at 2269.831 kb on - strand, within MPMX20_02179 at 2269.859 kb on + strand, within MPMX20_02179 at 2269.892 kb on - strand at 2269.903 kb on + strand at 2269.903 kb on + strand at 2269.903 kb on + strand at 2269.911 kb on - strand at 2269.911 kb on - strand at 2269.911 kb on - strand at 2269.969 kb on + strand at 2269.976 kb on + strand, within MPMX20_02180 at 2269.976 kb on + strand, within MPMX20_02180 at 2269.976 kb on + strand, within MPMX20_02180 at 2269.976 kb on + strand, within MPMX20_02180 at 2269.984 kb on - strand, within MPMX20_02180 at 2269.984 kb on - strand, within MPMX20_02180 at 2269.984 kb on - strand, within MPMX20_02180 at 2270.001 kb on + strand, within MPMX20_02180 at 2270.118 kb on + strand, within MPMX20_02180 at 2270.223 kb on + strand, within MPMX20_02180 at 2270.245 kb on - strand, within MPMX20_02180 at 2270.255 kb on - strand, within MPMX20_02180 at 2270.286 kb on + strand, within MPMX20_02180 at 2270.301 kb on + strand, within MPMX20_02180 at 2270.302 kb on - strand, within MPMX20_02180 at 2270.309 kb on - strand, within MPMX20_02180 at 2270.359 kb on + strand, within MPMX20_02180 at 2270.480 kb on + strand at 2270.488 kb on - strand at 2270.574 kb on - strand, within MPMX20_02181 at 2270.587 kb on - strand, within MPMX20_02181 at 2270.683 kb on + strand, within MPMX20_02181 at 2270.750 kb on + strand, within MPMX20_02181 at 2270.750 kb on + strand, within MPMX20_02181 at 2270.758 kb on - strand, within MPMX20_02181 at 2270.802 kb on - strand, within MPMX20_02181 at 2270.838 kb on + strand, within MPMX20_02181 at 2270.839 kb on + strand, within MPMX20_02181 at 2270.872 kb on - strand, within MPMX20_02181 at 2270.884 kb on + strand at 2270.939 kb on + strand at 2270.947 kb on - strand at 2271.049 kb on + strand, within MPMX20_02182 at 2271.049 kb on + strand, within MPMX20_02182 at 2271.049 kb on + strand, within MPMX20_02182 at 2271.057 kb on - strand, within MPMX20_02182 at 2271.081 kb on + strand, within MPMX20_02182 at 2271.213 kb on + strand, within MPMX20_02182 at 2271.283 kb on - strand, within MPMX20_02182 at 2271.300 kb on - strand, within MPMX20_02182 at 2271.393 kb on + strand at 2271.398 kb on + strand at 2271.401 kb on - strand at 2271.401 kb on - strand at 2271.555 kb on + strand, within MPMX20_02183 at 2271.591 kb on + strand, within MPMX20_02183 at 2271.597 kb on + strand, within MPMX20_02183 at 2271.698 kb on + strand, within MPMX20_02183 at 2271.698 kb on + strand, within MPMX20_02183 at 2271.706 kb on - strand, within MPMX20_02183 at 2271.781 kb on + strand, within MPMX20_02183 at 2271.784 kb on - strand, within MPMX20_02183 at 2271.784 kb on - strand, within MPMX20_02183 at 2271.784 kb on - strand, within MPMX20_02183 at 2271.784 kb on - strand, within MPMX20_02183 at 2271.784 kb on - strand, within MPMX20_02183 at 2271.804 kb on - strand, within MPMX20_02183 at 2271.804 kb on - strand, within MPMX20_02183 at 2271.847 kb on - strand, within MPMX20_02183
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 2,269,476 - MPMX20_02179 0.15 +2.0 2,269,493 + MPMX20_02179 0.18 -1.6 2,269,501 - MPMX20_02179 0.19 -2.7 2,269,506 - MPMX20_02179 0.20 -2.6 2,269,531 + MPMX20_02179 0.25 -0.3 2,269,547 - MPMX20_02179 0.28 +1.3 2,269,603 + MPMX20_02179 0.39 +1.1 2,269,629 - MPMX20_02179 0.44 +2.3 2,269,657 - MPMX20_02179 0.49 +0.6 2,269,713 + MPMX20_02179 0.60 +1.7 2,269,761 + MPMX20_02179 0.69 -3.5 2,269,766 + MPMX20_02179 0.70 +1.0 2,269,769 - MPMX20_02179 0.71 +0.1 2,269,831 - MPMX20_02179 0.83 +1.3 2,269,831 - MPMX20_02179 0.83 +1.3 2,269,859 + MPMX20_02179 0.88 +0.4 2,269,892 - +4.1 2,269,903 + +0.1 2,269,903 + -2.4 2,269,903 + +1.5 2,269,911 - +0.6 2,269,911 - -0.7 2,269,911 - +2.4 2,269,969 + -2.9 2,269,976 + MPMX20_02180 0.10 -1.3 2,269,976 + MPMX20_02180 0.10 +2.3 2,269,976 + MPMX20_02180 0.10 +0.0 2,269,976 + MPMX20_02180 0.10 +0.6 2,269,984 - MPMX20_02180 0.12 -0.1 2,269,984 - MPMX20_02180 0.12 +0.1 2,269,984 - MPMX20_02180 0.12 -3.7 2,270,001 + MPMX20_02180 0.15 +0.9 2,270,118 + MPMX20_02180 0.37 +1.6 2,270,223 + MPMX20_02180 0.57 -3.4 2,270,245 - MPMX20_02180 0.61 +0.4 2,270,255 - MPMX20_02180 0.63 +0.8 2,270,286 + MPMX20_02180 0.69 +4.5 2,270,301 + MPMX20_02180 0.72 +1.2 2,270,302 - MPMX20_02180 0.72 +2.3 2,270,309 - MPMX20_02180 0.73 +0.4 2,270,359 + MPMX20_02180 0.83 -3.2 2,270,480 + +1.9 2,270,488 - -3.0 2,270,574 - MPMX20_02181 0.26 -1.1 2,270,587 - MPMX20_02181 0.29 -3.0 2,270,683 + MPMX20_02181 0.49 -1.4 2,270,750 + MPMX20_02181 0.63 +0.6 2,270,750 + MPMX20_02181 0.63 -0.1 2,270,758 - MPMX20_02181 0.65 -2.0 2,270,802 - MPMX20_02181 0.75 -3.6 2,270,838 + MPMX20_02181 0.82 -2.0 2,270,839 + MPMX20_02181 0.82 -0.5 2,270,872 - MPMX20_02181 0.89 +1.3 2,270,884 + -2.7 2,270,939 + -2.9 2,270,947 - -1.6 2,271,049 + MPMX20_02182 0.28 +2.1 2,271,049 + MPMX20_02182 0.28 +0.4 2,271,049 + MPMX20_02182 0.28 -2.9 2,271,057 - MPMX20_02182 0.30 +0.1 2,271,081 + MPMX20_02182 0.36 +0.9 2,271,213 + MPMX20_02182 0.66 +0.8 2,271,283 - MPMX20_02182 0.82 -4.0 2,271,300 - MPMX20_02182 0.86 -3.3 2,271,393 + +4.0 2,271,398 + +1.9 2,271,401 - -2.9 2,271,401 - +2.1 2,271,555 + MPMX20_02183 0.10 +1.3 2,271,591 + MPMX20_02183 0.14 -1.9 2,271,597 + MPMX20_02183 0.15 +1.9 2,271,698 + MPMX20_02183 0.26 -0.0 2,271,698 + MPMX20_02183 0.26 +0.1 2,271,706 - MPMX20_02183 0.26 -1.1 2,271,781 + MPMX20_02183 0.34 -1.6 2,271,784 - MPMX20_02183 0.35 +0.8 2,271,784 - MPMX20_02183 0.35 -2.9 2,271,784 - MPMX20_02183 0.35 +2.8 2,271,784 - MPMX20_02183 0.35 +1.6 2,271,784 - MPMX20_02183 0.35 -1.4 2,271,804 - MPMX20_02183 0.37 +1.6 2,271,804 - MPMX20_02183 0.37 +0.6 2,271,847 - MPMX20_02183 0.41 +1.0
Or see this region's nucleotide sequence