Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00979 and MPMX20_00980 are separated by 231 nucleotides MPMX20_00980 and MPMX20_00981 are separated by 71 nucleotides MPMX20_00981 and MPMX20_00982 are separated by 45 nucleotides
MPMX20_00979: MPMX20_00979 - putative protein YaiA, at 1,030,117 to 1,030,308
_00979
MPMX20_00980: MPMX20_00980 - hypothetical protein, at 1,030,540 to 1,031,223
_00980
MPMX20_00981: MPMX20_00981 - Pyrimidine/purine nucleoside phosphorylase, at 1,031,295 to 1,031,582
_00981
MPMX20_00982: MPMX20_00982 - Recombination-associated protein RdgC, at 1,031,628 to 1,032,542
_00982
Position (kb)
1031
1032 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 1030.348 kb on + strand at 1030.448 kb on + strand at 1030.448 kb on + strand at 1030.456 kb on - strand at 1030.484 kb on + strand at 1030.494 kb on - strand at 1030.494 kb on - strand at 1030.494 kb on - strand at 1030.500 kb on + strand at 1030.500 kb on + strand at 1030.500 kb on + strand at 1030.500 kb on + strand at 1030.500 kb on + strand at 1030.508 kb on - strand at 1030.508 kb on - strand at 1030.508 kb on - strand at 1030.518 kb on + strand at 1030.571 kb on + strand at 1030.605 kb on - strand at 1030.605 kb on - strand at 1030.650 kb on - strand, within MPMX20_00980 at 1030.650 kb on - strand, within MPMX20_00980 at 1030.651 kb on - strand, within MPMX20_00980 at 1030.685 kb on - strand, within MPMX20_00980 at 1030.696 kb on + strand, within MPMX20_00980 at 1030.838 kb on + strand, within MPMX20_00980 at 1030.838 kb on + strand, within MPMX20_00980 at 1030.846 kb on - strand, within MPMX20_00980 at 1030.846 kb on - strand, within MPMX20_00980 at 1030.931 kb on + strand, within MPMX20_00980 at 1030.965 kb on + strand, within MPMX20_00980 at 1031.033 kb on - strand, within MPMX20_00980 at 1031.033 kb on - strand, within MPMX20_00980 at 1031.033 kb on - strand, within MPMX20_00980 at 1031.058 kb on + strand, within MPMX20_00980 at 1031.058 kb on + strand, within MPMX20_00980 at 1031.058 kb on + strand, within MPMX20_00980 at 1031.066 kb on - strand, within MPMX20_00980 at 1031.077 kb on + strand, within MPMX20_00980 at 1031.114 kb on + strand, within MPMX20_00980 at 1031.114 kb on + strand, within MPMX20_00980 at 1031.114 kb on + strand, within MPMX20_00980 at 1031.114 kb on + strand, within MPMX20_00980 at 1031.114 kb on + strand, within MPMX20_00980 at 1031.114 kb on + strand, within MPMX20_00980 at 1031.114 kb on + strand, within MPMX20_00980 at 1031.122 kb on - strand, within MPMX20_00980 at 1031.122 kb on - strand, within MPMX20_00980 at 1031.122 kb on - strand, within MPMX20_00980 at 1031.177 kb on + strand at 1031.178 kb on - strand at 1031.248 kb on - strand at 1031.340 kb on + strand, within MPMX20_00981 at 1031.351 kb on + strand, within MPMX20_00981 at 1031.361 kb on + strand, within MPMX20_00981 at 1031.369 kb on - strand, within MPMX20_00981 at 1031.379 kb on - strand, within MPMX20_00981 at 1031.394 kb on + strand, within MPMX20_00981 at 1031.433 kb on + strand, within MPMX20_00981 at 1031.512 kb on + strand, within MPMX20_00981 at 1031.512 kb on + strand, within MPMX20_00981 at 1031.520 kb on - strand, within MPMX20_00981 at 1031.520 kb on - strand, within MPMX20_00981 at 1031.562 kb on - strand at 1031.602 kb on - strand at 1031.602 kb on - strand at 1031.612 kb on - strand at 1031.626 kb on - strand at 1031.632 kb on - strand at 1031.634 kb on - strand at 1031.765 kb on + strand, within MPMX20_00982 at 1031.853 kb on - strand, within MPMX20_00982 at 1031.866 kb on + strand, within MPMX20_00982 at 1031.927 kb on - strand, within MPMX20_00982 at 1031.976 kb on + strand, within MPMX20_00982 at 1031.976 kb on + strand, within MPMX20_00982 at 1031.984 kb on - strand, within MPMX20_00982 at 1031.984 kb on - strand, within MPMX20_00982 at 1031.985 kb on - strand, within MPMX20_00982 at 1031.987 kb on + strand, within MPMX20_00982 at 1032.124 kb on + strand, within MPMX20_00982 at 1032.132 kb on - strand, within MPMX20_00982 at 1032.184 kb on - strand, within MPMX20_00982 at 1032.184 kb on - strand, within MPMX20_00982 at 1032.372 kb on + strand, within MPMX20_00982 at 1032.487 kb on - strand at 1032.487 kb on - strand at 1032.487 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 1,030,348 + -1.9 1,030,448 + +0.7 1,030,448 + +2.8 1,030,456 - -0.1 1,030,484 + +1.4 1,030,494 - -2.6 1,030,494 - -3.0 1,030,494 - +0.8 1,030,500 + -2.8 1,030,500 + -1.1 1,030,500 + +0.6 1,030,500 + +2.0 1,030,500 + -0.0 1,030,508 - +2.2 1,030,508 - -2.8 1,030,508 - -3.1 1,030,518 + -2.1 1,030,571 + -3.2 1,030,605 - -3.2 1,030,605 - +1.6 1,030,650 - MPMX20_00980 0.16 -2.6 1,030,650 - MPMX20_00980 0.16 -1.9 1,030,651 - MPMX20_00980 0.16 -0.2 1,030,685 - MPMX20_00980 0.21 +1.3 1,030,696 + MPMX20_00980 0.23 +2.2 1,030,838 + MPMX20_00980 0.44 -0.0 1,030,838 + MPMX20_00980 0.44 +1.3 1,030,846 - MPMX20_00980 0.45 +0.5 1,030,846 - MPMX20_00980 0.45 +3.5 1,030,931 + MPMX20_00980 0.57 -1.4 1,030,965 + MPMX20_00980 0.62 +0.5 1,031,033 - MPMX20_00980 0.72 +0.2 1,031,033 - MPMX20_00980 0.72 +0.7 1,031,033 - MPMX20_00980 0.72 -0.3 1,031,058 + MPMX20_00980 0.76 +1.4 1,031,058 + MPMX20_00980 0.76 -0.4 1,031,058 + MPMX20_00980 0.76 +4.4 1,031,066 - MPMX20_00980 0.77 -1.1 1,031,077 + MPMX20_00980 0.79 +1.3 1,031,114 + MPMX20_00980 0.84 +0.4 1,031,114 + MPMX20_00980 0.84 +2.1 1,031,114 + MPMX20_00980 0.84 -3.9 1,031,114 + MPMX20_00980 0.84 +1.3 1,031,114 + MPMX20_00980 0.84 +1.5 1,031,114 + MPMX20_00980 0.84 +1.7 1,031,114 + MPMX20_00980 0.84 +0.1 1,031,122 - MPMX20_00980 0.85 -1.7 1,031,122 - MPMX20_00980 0.85 -1.9 1,031,122 - MPMX20_00980 0.85 -1.8 1,031,177 + -2.1 1,031,178 - -0.1 1,031,248 - +0.3 1,031,340 + MPMX20_00981 0.16 -2.6 1,031,351 + MPMX20_00981 0.19 -1.1 1,031,361 + MPMX20_00981 0.23 +2.4 1,031,369 - MPMX20_00981 0.26 -0.0 1,031,379 - MPMX20_00981 0.29 +0.7 1,031,394 + MPMX20_00981 0.34 -2.7 1,031,433 + MPMX20_00981 0.48 -2.7 1,031,512 + MPMX20_00981 0.75 +0.2 1,031,512 + MPMX20_00981 0.75 -1.6 1,031,520 - MPMX20_00981 0.78 +3.0 1,031,520 - MPMX20_00981 0.78 +1.8 1,031,562 - -0.3 1,031,602 - -2.5 1,031,602 - +1.4 1,031,612 - +0.7 1,031,626 - +3.0 1,031,632 - -1.3 1,031,634 - -1.5 1,031,765 + MPMX20_00982 0.15 -2.1 1,031,853 - MPMX20_00982 0.25 +0.8 1,031,866 + MPMX20_00982 0.26 -1.9 1,031,927 - MPMX20_00982 0.33 +0.9 1,031,976 + MPMX20_00982 0.38 +0.4 1,031,976 + MPMX20_00982 0.38 +0.1 1,031,984 - MPMX20_00982 0.39 -3.9 1,031,984 - MPMX20_00982 0.39 +1.5 1,031,985 - MPMX20_00982 0.39 -0.1 1,031,987 + MPMX20_00982 0.39 +0.5 1,032,124 + MPMX20_00982 0.54 -0.1 1,032,132 - MPMX20_00982 0.55 -1.5 1,032,184 - MPMX20_00982 0.61 +0.1 1,032,184 - MPMX20_00982 0.61 -0.4 1,032,372 + MPMX20_00982 0.81 +0.5 1,032,487 - -2.8 1,032,487 - +0.4 1,032,487 - -1.9
Or see this region's nucleotide sequence