Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02674 and MPMX20_02675 are separated by 3 nucleotides MPMX20_02675 and MPMX20_02676 are separated by 75 nucleotides MPMX20_02676 and MPMX20_02677 are separated by 11 nucleotides MPMX20_02677 and MPMX20_02678 are separated by 16 nucleotides
MPMX20_02674: MPMX20_02674 - hypothetical protein, at 2,821,179 to 2,822,678
_02674
MPMX20_02675: MPMX20_02675 - hypothetical protein, at 2,822,682 to 2,823,206
_02675
MPMX20_02676: MPMX20_02676 - hypothetical protein, at 2,823,282 to 2,824,298
_02676
MPMX20_02677: MPMX20_02677 - hypothetical protein, at 2,824,310 to 2,825,026
_02677
MPMX20_02678: MPMX20_02678 - hypothetical protein, at 2,825,043 to 2,828,663
_02678
Position (kb)
2823
2824
2825 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2822.302 kb on - strand, within MPMX20_02674 at 2822.361 kb on - strand, within MPMX20_02674 at 2822.376 kb on + strand, within MPMX20_02674 at 2822.376 kb on + strand, within MPMX20_02674 at 2822.379 kb on - strand, within MPMX20_02674 at 2822.642 kb on - strand at 2822.642 kb on - strand at 2822.642 kb on - strand at 2822.644 kb on - strand at 2822.644 kb on - strand at 2822.734 kb on + strand at 2822.742 kb on - strand, within MPMX20_02675 at 2822.752 kb on - strand, within MPMX20_02675 at 2822.855 kb on + strand, within MPMX20_02675 at 2822.868 kb on - strand, within MPMX20_02675 at 2822.880 kb on - strand, within MPMX20_02675 at 2822.890 kb on - strand, within MPMX20_02675 at 2822.917 kb on + strand, within MPMX20_02675 at 2822.925 kb on - strand, within MPMX20_02675 at 2822.925 kb on - strand, within MPMX20_02675 at 2822.930 kb on - strand, within MPMX20_02675 at 2822.980 kb on + strand, within MPMX20_02675 at 2822.980 kb on - strand, within MPMX20_02675 at 2823.128 kb on + strand, within MPMX20_02675 at 2823.131 kb on - strand, within MPMX20_02675 at 2823.158 kb on + strand at 2823.173 kb on - strand at 2823.190 kb on + strand at 2823.190 kb on + strand at 2823.190 kb on + strand at 2823.190 kb on + strand at 2823.198 kb on - strand at 2823.198 kb on - strand at 2823.210 kb on - strand at 2823.322 kb on - strand at 2823.322 kb on - strand at 2823.405 kb on - strand, within MPMX20_02676 at 2823.424 kb on + strand, within MPMX20_02676 at 2823.425 kb on - strand, within MPMX20_02676 at 2823.455 kb on + strand, within MPMX20_02676 at 2823.512 kb on - strand, within MPMX20_02676 at 2823.541 kb on + strand, within MPMX20_02676 at 2823.541 kb on + strand, within MPMX20_02676 at 2823.578 kb on - strand, within MPMX20_02676 at 2823.670 kb on - strand, within MPMX20_02676 at 2823.730 kb on - strand, within MPMX20_02676 at 2823.767 kb on + strand, within MPMX20_02676 at 2823.775 kb on - strand, within MPMX20_02676 at 2823.904 kb on - strand, within MPMX20_02676 at 2824.077 kb on - strand, within MPMX20_02676 at 2824.099 kb on - strand, within MPMX20_02676 at 2824.158 kb on - strand, within MPMX20_02676 at 2824.184 kb on + strand, within MPMX20_02676 at 2824.197 kb on - strand at 2824.197 kb on - strand at 2824.202 kb on - strand at 2824.202 kb on - strand at 2824.235 kb on + strand at 2824.260 kb on + strand at 2824.301 kb on + strand at 2824.388 kb on - strand, within MPMX20_02677 at 2824.411 kb on + strand, within MPMX20_02677 at 2824.426 kb on - strand, within MPMX20_02677 at 2824.477 kb on + strand, within MPMX20_02677 at 2824.500 kb on + strand, within MPMX20_02677 at 2824.500 kb on + strand, within MPMX20_02677 at 2824.508 kb on - strand, within MPMX20_02677 at 2824.508 kb on - strand, within MPMX20_02677 at 2824.508 kb on - strand, within MPMX20_02677 at 2824.543 kb on + strand, within MPMX20_02677 at 2824.699 kb on + strand, within MPMX20_02677 at 2824.725 kb on + strand, within MPMX20_02677 at 2824.732 kb on + strand, within MPMX20_02677 at 2824.733 kb on - strand, within MPMX20_02677 at 2824.740 kb on - strand, within MPMX20_02677 at 2824.905 kb on + strand, within MPMX20_02677 at 2824.913 kb on - strand, within MPMX20_02677 at 2824.979 kb on - strand at 2824.985 kb on + strand at 2825.117 kb on - strand at 2825.144 kb on + strand at 2825.230 kb on - strand at 2825.249 kb on - strand at 2825.262 kb on + strand at 2825.267 kb on + strand at 2825.270 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 2,822,302 - MPMX20_02674 0.75 +0.0 2,822,361 - MPMX20_02674 0.79 -1.0 2,822,376 + MPMX20_02674 0.80 +2.3 2,822,376 + MPMX20_02674 0.80 +0.3 2,822,379 - MPMX20_02674 0.80 +0.6 2,822,642 - -0.7 2,822,642 - +0.4 2,822,642 - +0.1 2,822,644 - +0.2 2,822,644 - -1.1 2,822,734 + +0.7 2,822,742 - MPMX20_02675 0.11 +0.2 2,822,752 - MPMX20_02675 0.13 +0.4 2,822,855 + MPMX20_02675 0.33 +2.9 2,822,868 - MPMX20_02675 0.35 -3.1 2,822,880 - MPMX20_02675 0.38 -0.4 2,822,890 - MPMX20_02675 0.40 -0.6 2,822,917 + MPMX20_02675 0.45 +1.2 2,822,925 - MPMX20_02675 0.46 -0.7 2,822,925 - MPMX20_02675 0.46 -0.6 2,822,930 - MPMX20_02675 0.47 +0.2 2,822,980 + MPMX20_02675 0.57 -0.4 2,822,980 - MPMX20_02675 0.57 +2.3 2,823,128 + MPMX20_02675 0.85 -0.7 2,823,131 - MPMX20_02675 0.86 +0.1 2,823,158 + +1.7 2,823,173 - -0.7 2,823,190 + +0.6 2,823,190 + +0.9 2,823,190 + +0.1 2,823,190 + -0.1 2,823,198 - +0.9 2,823,198 - -1.0 2,823,210 - -0.3 2,823,322 - -2.3 2,823,322 - +1.0 2,823,405 - MPMX20_02676 0.12 +0.4 2,823,424 + MPMX20_02676 0.14 +3.4 2,823,425 - MPMX20_02676 0.14 +0.3 2,823,455 + MPMX20_02676 0.17 +1.6 2,823,512 - MPMX20_02676 0.23 +0.6 2,823,541 + MPMX20_02676 0.25 -2.1 2,823,541 + MPMX20_02676 0.25 +0.5 2,823,578 - MPMX20_02676 0.29 +1.1 2,823,670 - MPMX20_02676 0.38 -0.6 2,823,730 - MPMX20_02676 0.44 -0.7 2,823,767 + MPMX20_02676 0.48 -0.3 2,823,775 - MPMX20_02676 0.48 -0.4 2,823,904 - MPMX20_02676 0.61 -0.2 2,824,077 - MPMX20_02676 0.78 -0.5 2,824,099 - MPMX20_02676 0.80 -0.1 2,824,158 - MPMX20_02676 0.86 -1.6 2,824,184 + MPMX20_02676 0.89 +1.2 2,824,197 - +0.8 2,824,197 - -0.4 2,824,202 - -0.6 2,824,202 - -0.1 2,824,235 + +0.8 2,824,260 + -0.2 2,824,301 + +1.6 2,824,388 - MPMX20_02677 0.11 -0.3 2,824,411 + MPMX20_02677 0.14 +0.9 2,824,426 - MPMX20_02677 0.16 +0.4 2,824,477 + MPMX20_02677 0.23 +0.4 2,824,500 + MPMX20_02677 0.26 +0.5 2,824,500 + MPMX20_02677 0.26 +0.3 2,824,508 - MPMX20_02677 0.28 -1.6 2,824,508 - MPMX20_02677 0.28 -0.4 2,824,508 - MPMX20_02677 0.28 -1.3 2,824,543 + MPMX20_02677 0.32 +1.7 2,824,699 + MPMX20_02677 0.54 +0.3 2,824,725 + MPMX20_02677 0.58 -1.5 2,824,732 + MPMX20_02677 0.59 -0.4 2,824,733 - MPMX20_02677 0.59 -2.4 2,824,740 - MPMX20_02677 0.60 -1.2 2,824,905 + MPMX20_02677 0.83 +1.3 2,824,913 - MPMX20_02677 0.84 -0.7 2,824,979 - -0.0 2,824,985 + +0.6 2,825,117 - +1.0 2,825,144 + +1.2 2,825,230 - +0.8 2,825,249 - +0.5 2,825,262 + -1.3 2,825,267 + +2.2 2,825,270 - +0.4
Or see this region's nucleotide sequence