Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04560 and MPMX20_04561 are separated by 0 nucleotides MPMX20_04561 and MPMX20_04562 are separated by 73 nucleotides MPMX20_04562 and MPMX20_04563 are separated by 301 nucleotides
MPMX20_04560: MPMX20_04560 - L-rhamnose-proton symporter, at 4,771,607 to 4,772,641
_04560
MPMX20_04561: MPMX20_04561 - HTH-type transcriptional activator RhaR, at 4,772,642 to 4,773,490
_04561
MPMX20_04562: MPMX20_04562 - HTH-type transcriptional activator RhaS, at 4,773,564 to 4,774,400
_04562
MPMX20_04563: MPMX20_04563 - L-Rhamnulokinase, at 4,774,702 to 4,776,171
_04563
Position (kb)
4773
4774
4775 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4772.640 kb on + strand at 4772.707 kb on - strand at 4772.736 kb on - strand, within MPMX20_04561 at 4772.791 kb on + strand, within MPMX20_04561 at 4772.794 kb on - strand, within MPMX20_04561 at 4772.882 kb on - strand, within MPMX20_04561 at 4772.892 kb on - strand, within MPMX20_04561 at 4772.916 kb on - strand, within MPMX20_04561 at 4772.928 kb on - strand, within MPMX20_04561 at 4772.943 kb on + strand, within MPMX20_04561 at 4772.943 kb on + strand, within MPMX20_04561 at 4772.951 kb on - strand, within MPMX20_04561 at 4772.979 kb on + strand, within MPMX20_04561 at 4772.987 kb on - strand, within MPMX20_04561 at 4773.126 kb on + strand, within MPMX20_04561 at 4773.249 kb on - strand, within MPMX20_04561 at 4773.249 kb on - strand, within MPMX20_04561 at 4773.269 kb on - strand, within MPMX20_04561 at 4773.346 kb on - strand, within MPMX20_04561 at 4773.359 kb on + strand, within MPMX20_04561 at 4773.379 kb on + strand, within MPMX20_04561 at 4773.379 kb on + strand, within MPMX20_04561 at 4773.387 kb on - strand, within MPMX20_04561 at 4773.472 kb on + strand at 4773.564 kb on + strand at 4773.755 kb on - strand, within MPMX20_04562 at 4773.755 kb on - strand, within MPMX20_04562 at 4773.842 kb on - strand, within MPMX20_04562 at 4773.865 kb on - strand, within MPMX20_04562 at 4773.978 kb on - strand, within MPMX20_04562 at 4773.992 kb on - strand, within MPMX20_04562 at 4774.012 kb on - strand, within MPMX20_04562 at 4774.069 kb on + strand, within MPMX20_04562 at 4774.077 kb on - strand, within MPMX20_04562 at 4774.077 kb on - strand, within MPMX20_04562 at 4774.103 kb on + strand, within MPMX20_04562 at 4774.160 kb on + strand, within MPMX20_04562 at 4774.160 kb on + strand, within MPMX20_04562 at 4774.168 kb on - strand, within MPMX20_04562 at 4774.183 kb on + strand, within MPMX20_04562 at 4774.193 kb on + strand, within MPMX20_04562 at 4774.210 kb on + strand, within MPMX20_04562 at 4774.242 kb on - strand, within MPMX20_04562 at 4774.242 kb on - strand, within MPMX20_04562 at 4774.242 kb on - strand, within MPMX20_04562 at 4774.386 kb on + strand at 4774.386 kb on + strand at 4774.395 kb on + strand at 4774.538 kb on + strand at 4774.538 kb on + strand at 4774.538 kb on + strand at 4774.538 kb on + strand at 4774.635 kb on + strand at 4774.751 kb on + strand at 4774.751 kb on + strand at 4774.759 kb on - strand at 4774.841 kb on + strand at 4774.841 kb on + strand at 4774.841 kb on + strand at 4774.841 kb on + strand at 4774.841 kb on + strand at 4774.849 kb on - strand, within MPMX20_04563 at 4774.849 kb on - strand, within MPMX20_04563 at 4774.849 kb on - strand, within MPMX20_04563 at 4774.849 kb on - strand, within MPMX20_04563 at 4774.849 kb on - strand, within MPMX20_04563 at 4774.849 kb on - strand, within MPMX20_04563 at 4774.849 kb on - strand, within MPMX20_04563 at 4774.857 kb on - strand, within MPMX20_04563 at 4774.865 kb on + strand, within MPMX20_04563 at 4774.865 kb on + strand, within MPMX20_04563 at 4774.907 kb on - strand, within MPMX20_04563 at 4774.926 kb on - strand, within MPMX20_04563 at 4775.029 kb on - strand, within MPMX20_04563 at 4775.161 kb on - strand, within MPMX20_04563 at 4775.173 kb on + strand, within MPMX20_04563 at 4775.173 kb on - strand, within MPMX20_04563 at 4775.200 kb on + strand, within MPMX20_04563 at 4775.261 kb on - strand, within MPMX20_04563 at 4775.276 kb on + strand, within MPMX20_04563 at 4775.292 kb on + strand, within MPMX20_04563 at 4775.300 kb on - strand, within MPMX20_04563 at 4775.381 kb on - strand, within MPMX20_04563
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 4,772,640 + -1.5 4,772,707 - +0.4 4,772,736 - MPMX20_04561 0.11 +2.9 4,772,791 + MPMX20_04561 0.18 -0.3 4,772,794 - MPMX20_04561 0.18 +1.0 4,772,882 - MPMX20_04561 0.28 +0.6 4,772,892 - MPMX20_04561 0.29 +0.0 4,772,916 - MPMX20_04561 0.32 -0.2 4,772,928 - MPMX20_04561 0.34 -2.8 4,772,943 + MPMX20_04561 0.35 +0.5 4,772,943 + MPMX20_04561 0.35 +0.3 4,772,951 - MPMX20_04561 0.36 +0.2 4,772,979 + MPMX20_04561 0.40 +0.4 4,772,987 - MPMX20_04561 0.41 -0.1 4,773,126 + MPMX20_04561 0.57 -1.1 4,773,249 - MPMX20_04561 0.71 -2.4 4,773,249 - MPMX20_04561 0.71 -2.3 4,773,269 - MPMX20_04561 0.74 +0.6 4,773,346 - MPMX20_04561 0.83 +2.2 4,773,359 + MPMX20_04561 0.84 -0.4 4,773,379 + MPMX20_04561 0.87 +1.0 4,773,379 + MPMX20_04561 0.87 -0.1 4,773,387 - MPMX20_04561 0.88 +0.1 4,773,472 + +1.2 4,773,564 + +0.3 4,773,755 - MPMX20_04562 0.23 -0.4 4,773,755 - MPMX20_04562 0.23 -1.1 4,773,842 - MPMX20_04562 0.33 -1.0 4,773,865 - MPMX20_04562 0.36 +1.1 4,773,978 - MPMX20_04562 0.49 -1.9 4,773,992 - MPMX20_04562 0.51 -0.5 4,774,012 - MPMX20_04562 0.54 +1.0 4,774,069 + MPMX20_04562 0.60 -1.7 4,774,077 - MPMX20_04562 0.61 +0.2 4,774,077 - MPMX20_04562 0.61 -1.6 4,774,103 + MPMX20_04562 0.64 +1.2 4,774,160 + MPMX20_04562 0.71 -0.3 4,774,160 + MPMX20_04562 0.71 -0.1 4,774,168 - MPMX20_04562 0.72 -0.3 4,774,183 + MPMX20_04562 0.74 -0.3 4,774,193 + MPMX20_04562 0.75 +0.1 4,774,210 + MPMX20_04562 0.77 -0.6 4,774,242 - MPMX20_04562 0.81 -0.2 4,774,242 - MPMX20_04562 0.81 +1.3 4,774,242 - MPMX20_04562 0.81 +1.3 4,774,386 + +0.6 4,774,386 + +1.0 4,774,395 + +0.4 4,774,538 + -0.4 4,774,538 + -2.5 4,774,538 + -2.3 4,774,538 + -0.8 4,774,635 + +0.7 4,774,751 + -1.5 4,774,751 + +0.9 4,774,759 - +0.5 4,774,841 + -0.3 4,774,841 + +1.6 4,774,841 + -0.7 4,774,841 + +0.8 4,774,841 + +0.5 4,774,849 - MPMX20_04563 0.10 +0.6 4,774,849 - MPMX20_04563 0.10 -0.8 4,774,849 - MPMX20_04563 0.10 -0.0 4,774,849 - MPMX20_04563 0.10 -0.2 4,774,849 - MPMX20_04563 0.10 -0.1 4,774,849 - MPMX20_04563 0.10 +0.0 4,774,849 - MPMX20_04563 0.10 -1.1 4,774,857 - MPMX20_04563 0.11 +1.4 4,774,865 + MPMX20_04563 0.11 +1.0 4,774,865 + MPMX20_04563 0.11 +0.2 4,774,907 - MPMX20_04563 0.14 +0.6 4,774,926 - MPMX20_04563 0.15 -0.8 4,775,029 - MPMX20_04563 0.22 +0.7 4,775,161 - MPMX20_04563 0.31 -2.6 4,775,173 + MPMX20_04563 0.32 +0.2 4,775,173 - MPMX20_04563 0.32 +0.2 4,775,200 + MPMX20_04563 0.34 -0.0 4,775,261 - MPMX20_04563 0.38 +1.0 4,775,276 + MPMX20_04563 0.39 +0.5 4,775,292 + MPMX20_04563 0.40 +0.8 4,775,300 - MPMX20_04563 0.41 +0.2 4,775,381 - MPMX20_04563 0.46 +0.5
Or see this region's nucleotide sequence