Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02780 and MPMX20_02781 are separated by 4 nucleotides MPMX20_02781 and MPMX20_02782 are separated by 264 nucleotides MPMX20_02782 and MPMX20_02783 overlap by 1 nucleotides
MPMX20_02780: MPMX20_02780 - Unsaturated rhamnogalacturonyl hydrolase YesR, at 2,934,371 to 2,935,510
_02780
MPMX20_02781: MPMX20_02781 - Putative glycoside/cation symporter YagG, at 2,935,515 to 2,937,098
_02781
MPMX20_02782: MPMX20_02782 - Flagellar protein FlhE, at 2,937,363 to 2,937,755
_02782
MPMX20_02783: MPMX20_02783 - Flagellar biosynthesis protein FlhA, at 2,937,755 to 2,939,833
_02783
Position (kb)
2935
2936
2937
2938 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2934.559 kb on + strand, within MPMX20_02780 at 2934.578 kb on + strand, within MPMX20_02780 at 2934.586 kb on - strand, within MPMX20_02780 at 2934.642 kb on + strand, within MPMX20_02780 at 2934.650 kb on - strand, within MPMX20_02780 at 2934.667 kb on + strand, within MPMX20_02780 at 2934.667 kb on + strand, within MPMX20_02780 at 2934.741 kb on - strand, within MPMX20_02780 at 2934.820 kb on - strand, within MPMX20_02780 at 2934.926 kb on + strand, within MPMX20_02780 at 2934.940 kb on + strand, within MPMX20_02780 at 2935.045 kb on + strand, within MPMX20_02780 at 2935.097 kb on - strand, within MPMX20_02780 at 2935.155 kb on + strand, within MPMX20_02780 at 2935.177 kb on + strand, within MPMX20_02780 at 2935.215 kb on - strand, within MPMX20_02780 at 2935.273 kb on + strand, within MPMX20_02780 at 2935.283 kb on - strand, within MPMX20_02780 at 2935.293 kb on + strand, within MPMX20_02780 at 2935.301 kb on - strand, within MPMX20_02780 at 2935.301 kb on - strand, within MPMX20_02780 at 2935.301 kb on - strand, within MPMX20_02780 at 2935.303 kb on - strand, within MPMX20_02780 at 2935.303 kb on - strand, within MPMX20_02780 at 2935.319 kb on + strand, within MPMX20_02780 at 2935.327 kb on - strand, within MPMX20_02780 at 2935.343 kb on - strand, within MPMX20_02780 at 2935.391 kb on + strand, within MPMX20_02780 at 2935.394 kb on - strand, within MPMX20_02780 at 2935.485 kb on - strand at 2935.485 kb on - strand at 2935.487 kb on + strand at 2935.487 kb on + strand at 2935.487 kb on + strand at 2935.495 kb on - strand at 2935.495 kb on - strand at 2935.495 kb on - strand at 2935.520 kb on - strand at 2935.520 kb on - strand at 2935.557 kb on - strand at 2935.567 kb on + strand at 2935.609 kb on + strand at 2935.652 kb on - strand at 2935.659 kb on + strand at 2935.667 kb on - strand at 2935.667 kb on - strand at 2935.731 kb on + strand, within MPMX20_02781 at 2935.751 kb on + strand, within MPMX20_02781 at 2935.817 kb on + strand, within MPMX20_02781 at 2935.833 kb on + strand, within MPMX20_02781 at 2935.965 kb on + strand, within MPMX20_02781 at 2936.012 kb on - strand, within MPMX20_02781 at 2936.012 kb on - strand, within MPMX20_02781 at 2936.099 kb on - strand, within MPMX20_02781 at 2936.101 kb on + strand, within MPMX20_02781 at 2936.101 kb on + strand, within MPMX20_02781 at 2936.101 kb on + strand, within MPMX20_02781 at 2936.109 kb on - strand, within MPMX20_02781 at 2936.114 kb on - strand, within MPMX20_02781 at 2936.116 kb on + strand, within MPMX20_02781 at 2936.134 kb on + strand, within MPMX20_02781 at 2936.246 kb on + strand, within MPMX20_02781 at 2936.246 kb on + strand, within MPMX20_02781 at 2936.378 kb on + strand, within MPMX20_02781 at 2936.380 kb on + strand, within MPMX20_02781 at 2936.391 kb on - strand, within MPMX20_02781 at 2936.464 kb on - strand, within MPMX20_02781 at 2936.500 kb on + strand, within MPMX20_02781 at 2936.531 kb on + strand, within MPMX20_02781 at 2936.531 kb on + strand, within MPMX20_02781 at 2936.537 kb on - strand, within MPMX20_02781 at 2936.539 kb on - strand, within MPMX20_02781 at 2936.544 kb on - strand, within MPMX20_02781 at 2936.544 kb on - strand, within MPMX20_02781 at 2936.549 kb on - strand, within MPMX20_02781 at 2936.616 kb on + strand, within MPMX20_02781 at 2936.664 kb on - strand, within MPMX20_02781 at 2936.705 kb on + strand, within MPMX20_02781 at 2936.757 kb on + strand, within MPMX20_02781 at 2936.786 kb on + strand, within MPMX20_02781 at 2936.973 kb on - strand at 2936.975 kb on + strand at 2937.102 kb on + strand at 2937.110 kb on - strand at 2937.110 kb on - strand at 2937.115 kb on - strand at 2937.115 kb on - strand at 2937.131 kb on + strand at 2937.136 kb on + strand at 2937.179 kb on - strand at 2937.187 kb on - strand at 2937.247 kb on + strand at 2937.404 kb on + strand, within MPMX20_02782 at 2937.409 kb on + strand, within MPMX20_02782 at 2937.411 kb on + strand, within MPMX20_02782 at 2937.417 kb on - strand, within MPMX20_02782 at 2937.419 kb on - strand, within MPMX20_02782 at 2937.480 kb on + strand, within MPMX20_02782 at 2937.498 kb on - strand, within MPMX20_02782 at 2937.537 kb on - strand, within MPMX20_02782 at 2937.542 kb on + strand, within MPMX20_02782 at 2937.579 kb on + strand, within MPMX20_02782 at 2937.587 kb on + strand, within MPMX20_02782 at 2937.596 kb on - strand, within MPMX20_02782 at 2937.619 kb on + strand, within MPMX20_02782 at 2937.623 kb on + strand, within MPMX20_02782 at 2937.673 kb on - strand, within MPMX20_02782 at 2937.674 kb on - strand, within MPMX20_02782 at 2937.801 kb on + strand at 2937.841 kb on - strand at 2937.931 kb on + strand at 2937.969 kb on + strand, within MPMX20_02783 at 2937.969 kb on + strand, within MPMX20_02783 at 2937.972 kb on - strand, within MPMX20_02783 at 2937.977 kb on - strand, within MPMX20_02783 at 2937.977 kb on - strand, within MPMX20_02783 at 2938.045 kb on - strand, within MPMX20_02783 at 2938.085 kb on + strand, within MPMX20_02783
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,934,559 + MPMX20_02780 0.16 -1.1 2,934,578 + MPMX20_02780 0.18 -1.0 2,934,586 - MPMX20_02780 0.19 +1.8 2,934,642 + MPMX20_02780 0.24 +0.5 2,934,650 - MPMX20_02780 0.24 +0.2 2,934,667 + MPMX20_02780 0.26 +1.0 2,934,667 + MPMX20_02780 0.26 +1.3 2,934,741 - MPMX20_02780 0.32 -1.8 2,934,820 - MPMX20_02780 0.39 +0.5 2,934,926 + MPMX20_02780 0.49 +0.0 2,934,940 + MPMX20_02780 0.50 +1.1 2,935,045 + MPMX20_02780 0.59 -0.4 2,935,097 - MPMX20_02780 0.64 +0.9 2,935,155 + MPMX20_02780 0.69 +0.0 2,935,177 + MPMX20_02780 0.71 -0.9 2,935,215 - MPMX20_02780 0.74 -0.2 2,935,273 + MPMX20_02780 0.79 -0.3 2,935,283 - MPMX20_02780 0.80 -2.6 2,935,293 + MPMX20_02780 0.81 -0.1 2,935,301 - MPMX20_02780 0.82 -1.6 2,935,301 - MPMX20_02780 0.82 +2.4 2,935,301 - MPMX20_02780 0.82 +0.1 2,935,303 - MPMX20_02780 0.82 -1.1 2,935,303 - MPMX20_02780 0.82 +0.2 2,935,319 + MPMX20_02780 0.83 -0.5 2,935,327 - MPMX20_02780 0.84 -0.1 2,935,343 - MPMX20_02780 0.85 -0.4 2,935,391 + MPMX20_02780 0.89 -0.4 2,935,394 - MPMX20_02780 0.90 +0.0 2,935,485 - -0.3 2,935,485 - +0.3 2,935,487 + +1.3 2,935,487 + +0.0 2,935,487 + -0.7 2,935,495 - +1.6 2,935,495 - +1.7 2,935,495 - -1.8 2,935,520 - -0.2 2,935,520 - +0.5 2,935,557 - -0.4 2,935,567 + -0.1 2,935,609 + +3.8 2,935,652 - -2.4 2,935,659 + -0.4 2,935,667 - -1.4 2,935,667 - +1.5 2,935,731 + MPMX20_02781 0.14 -1.8 2,935,751 + MPMX20_02781 0.15 -0.8 2,935,817 + MPMX20_02781 0.19 -0.6 2,935,833 + MPMX20_02781 0.20 -0.8 2,935,965 + MPMX20_02781 0.28 -0.8 2,936,012 - MPMX20_02781 0.31 -1.4 2,936,012 - MPMX20_02781 0.31 +0.8 2,936,099 - MPMX20_02781 0.37 +0.4 2,936,101 + MPMX20_02781 0.37 -1.3 2,936,101 + MPMX20_02781 0.37 -1.4 2,936,101 + MPMX20_02781 0.37 +0.5 2,936,109 - MPMX20_02781 0.38 +0.2 2,936,114 - MPMX20_02781 0.38 -1.1 2,936,116 + MPMX20_02781 0.38 +2.3 2,936,134 + MPMX20_02781 0.39 -0.0 2,936,246 + MPMX20_02781 0.46 -0.4 2,936,246 + MPMX20_02781 0.46 -1.6 2,936,378 + MPMX20_02781 0.54 -1.1 2,936,380 + MPMX20_02781 0.55 +0.2 2,936,391 - MPMX20_02781 0.55 -1.1 2,936,464 - MPMX20_02781 0.60 +1.0 2,936,500 + MPMX20_02781 0.62 +0.6 2,936,531 + MPMX20_02781 0.64 +1.4 2,936,531 + MPMX20_02781 0.64 +1.3 2,936,537 - MPMX20_02781 0.65 +1.7 2,936,539 - MPMX20_02781 0.65 +1.0 2,936,544 - MPMX20_02781 0.65 -2.4 2,936,544 - MPMX20_02781 0.65 +0.6 2,936,549 - MPMX20_02781 0.65 +1.6 2,936,616 + MPMX20_02781 0.70 -0.3 2,936,664 - MPMX20_02781 0.73 +0.3 2,936,705 + MPMX20_02781 0.75 +1.7 2,936,757 + MPMX20_02781 0.78 -0.8 2,936,786 + MPMX20_02781 0.80 -1.3 2,936,973 - -0.0 2,936,975 + -0.6 2,937,102 + -1.5 2,937,110 - -1.9 2,937,110 - -3.1 2,937,115 - -1.1 2,937,115 - +0.5 2,937,131 + +1.9 2,937,136 + -2.7 2,937,179 - -1.0 2,937,187 - +0.2 2,937,247 + -0.4 2,937,404 + MPMX20_02782 0.10 +2.3 2,937,409 + MPMX20_02782 0.12 -0.8 2,937,411 + MPMX20_02782 0.12 -1.4 2,937,417 - MPMX20_02782 0.14 -1.4 2,937,419 - MPMX20_02782 0.14 +2.2 2,937,480 + MPMX20_02782 0.30 -1.1 2,937,498 - MPMX20_02782 0.34 +1.2 2,937,537 - MPMX20_02782 0.44 -1.5 2,937,542 + MPMX20_02782 0.46 +0.6 2,937,579 + MPMX20_02782 0.55 +2.2 2,937,587 + MPMX20_02782 0.57 +0.4 2,937,596 - MPMX20_02782 0.59 -2.0 2,937,619 + MPMX20_02782 0.65 +0.3 2,937,623 + MPMX20_02782 0.66 -0.8 2,937,673 - MPMX20_02782 0.79 +0.9 2,937,674 - MPMX20_02782 0.79 -0.3 2,937,801 + -0.4 2,937,841 - +1.2 2,937,931 + -0.7 2,937,969 + MPMX20_02783 0.10 -0.0 2,937,969 + MPMX20_02783 0.10 -0.8 2,937,972 - MPMX20_02783 0.10 -0.1 2,937,977 - MPMX20_02783 0.11 -1.2 2,937,977 - MPMX20_02783 0.11 -0.1 2,938,045 - MPMX20_02783 0.14 -1.1 2,938,085 + MPMX20_02783 0.16 -1.1
Or see this region's nucleotide sequence