Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03989

Experiment: D-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Lactate (C)
4,182,473	-				+1.9
4,182,491	+				+2.0
4,182,507	-				-2.2
4,182,519	-				+2.2
4,182,533	-				-0.4
4,182,580	-		MPMX20_03988	0.14	-0.7
4,182,590	+		MPMX20_03988	0.15	-1.1
4,182,666	+		MPMX20_03988	0.23	-0.7
4,182,673	+		MPMX20_03988	0.24	+2.3
4,182,680	-		MPMX20_03988	0.24	-1.8
4,182,690	-		MPMX20_03988	0.25	+0.3
4,182,694	+		MPMX20_03988	0.26	+2.3
4,182,700	-		MPMX20_03988	0.26	-1.1
4,182,702	-		MPMX20_03988	0.27	-1.1
4,182,710	+		MPMX20_03988	0.27	-1.9
4,182,718	-		MPMX20_03988	0.28	+1.0
4,182,743	-		MPMX20_03988	0.31	+3.3
4,182,881	-		MPMX20_03988	0.45	+0.3
4,182,892	+		MPMX20_03988	0.46	+0.9
4,182,906	-		MPMX20_03988	0.47	-0.3
4,182,933	-		MPMX20_03988	0.50	-1.9
4,182,959	+		MPMX20_03988	0.52	-2.0
4,182,967	-		MPMX20_03988	0.53	-1.2
4,182,976	-		MPMX20_03988	0.54	-0.7
4,182,979	+		MPMX20_03988	0.54	-0.6
4,182,987	-		MPMX20_03988	0.55	+2.8
4,182,992	+		MPMX20_03988	0.56	-0.9
4,183,053	-		MPMX20_03988	0.62	+0.9
4,183,055	+		MPMX20_03988	0.62	-1.6
4,183,063	-		MPMX20_03988	0.63	-3.2
4,183,073	-		MPMX20_03988	0.64	+0.3
4,183,074	+		MPMX20_03988	0.64	-0.3
4,183,116	+		MPMX20_03988	0.68	+0.1
4,183,116	+		MPMX20_03988	0.68	-0.7
4,183,116	+		MPMX20_03988	0.68	+1.0
4,183,124	-		MPMX20_03988	0.69	+1.0
4,183,124	-		MPMX20_03988	0.69	-2.8
4,183,129	-		MPMX20_03988	0.69	+0.6
4,183,134	+		MPMX20_03988	0.70	+1.6
4,183,149	+		MPMX20_03988	0.71	+1.1
4,183,149	+		MPMX20_03988	0.71	+1.1
4,183,209	-		MPMX20_03988	0.77	+0.3
4,183,211	+		MPMX20_03988	0.77	-1.0
4,183,214	-		MPMX20_03988	0.78	+1.7
4,183,229	-		MPMX20_03988	0.79	-1.7
4,183,244	-		MPMX20_03988	0.81	+1.9
4,183,244	-		MPMX20_03988	0.81	+1.4
4,183,269	+		MPMX20_03988	0.83	+1.9
4,183,352	+				+0.3
4,183,393	-				-0.0
4,183,418	-				-1.4
4,183,418	-				-2.0
4,183,527	+				+0.3
4,183,535	-		MPMX20_03989	0.10	-0.3
4,183,571	+		MPMX20_03989	0.14	-1.1
4,183,578	-		MPMX20_03989	0.15	+1.6
4,183,582	+		MPMX20_03989	0.15	-0.4
4,183,607	+		MPMX20_03989	0.18	+1.9
4,183,607	+		MPMX20_03989	0.18	-1.6
4,183,666	+		MPMX20_03989	0.24	-2.2
4,183,666	-		MPMX20_03989	0.24	-0.7
4,183,676	+		MPMX20_03989	0.25	-1.2
4,183,678	+		MPMX20_03989	0.25	-1.7
4,183,678	+		MPMX20_03989	0.25	-0.2
4,183,686	-		MPMX20_03989	0.26	+0.0
4,183,742	-		MPMX20_03989	0.31	+0.0
4,183,834	+		MPMX20_03989	0.41	+1.6
4,183,845	+		MPMX20_03989	0.42	-1.4
4,183,937	+		MPMX20_03989	0.51	-0.2
4,183,945	-		MPMX20_03989	0.52	+1.6
4,183,963	+		MPMX20_03989	0.54	-0.7
4,183,963	+		MPMX20_03989	0.54	+0.5
4,183,971	-		MPMX20_03989	0.55	-0.5
4,183,971	-		MPMX20_03989	0.55	-0.6
4,183,971	-		MPMX20_03989	0.55	+0.8
4,183,971	-		MPMX20_03989	0.55	+2.0
4,183,971	-		MPMX20_03989	0.55	-1.4
4,183,993	-		MPMX20_03989	0.57	+0.3
4,183,993	-		MPMX20_03989	0.57	-1.6
4,184,024	+		MPMX20_03989	0.60	+1.0
4,184,040	+		MPMX20_03989	0.62	+1.2
4,184,109	+		MPMX20_03989	0.69	+1.6
4,184,117	-		MPMX20_03989	0.70	+1.6
4,184,117	-		MPMX20_03989	0.70	+3.3
4,184,117	-		MPMX20_03989	0.70	-0.9
4,184,202	+		MPMX20_03989	0.78	+1.0
4,184,214	+		MPMX20_03989	0.79	+0.0
4,184,257	+		MPMX20_03989	0.84	-2.6
4,184,257	+		MPMX20_03989	0.84	+1.1
4,184,271	-		MPMX20_03989	0.85	+0.2
4,184,307	+		MPMX20_03989	0.89	-0.1
4,184,307	+		MPMX20_03989	0.89	+0.4
4,184,315	-		MPMX20_03989	0.90	-1.7
4,184,352	+				+1.3
4,184,360	-				+0.3
4,184,433	-				+2.5
4,184,457	-				-2.0
4,184,486	-				+0.7
4,184,492	+				+0.4
4,184,617	+		MPMX20_03990	0.19	+0.5
4,184,671	+		MPMX20_03990	0.25	-1.4
4,184,671	+		MPMX20_03990	0.25	+0.6
4,184,679	-		MPMX20_03990	0.25	+0.0
4,184,686	+		MPMX20_03990	0.26	+2.9
4,184,694	-		MPMX20_03990	0.27	-1.3
4,184,752	-		MPMX20_03990	0.32	-0.3
4,184,755	+		MPMX20_03990	0.33	+2.0
4,184,755	+		MPMX20_03990	0.33	+1.0
4,184,815	+		MPMX20_03990	0.39	+0.3
4,184,840	+		MPMX20_03990	0.41	+1.0
4,184,853	+		MPMX20_03990	0.42	+0.6
4,184,853	-		MPMX20_03990	0.42	+1.7
4,184,923	+		MPMX20_03990	0.49	+1.3
4,185,016	+		MPMX20_03990	0.58	+1.0
4,185,055	+		MPMX20_03990	0.62	+0.2
4,185,071	-		MPMX20_03990	0.63	+1.5
4,185,082	+		MPMX20_03990	0.64	+0.6
4,185,132	+		MPMX20_03990	0.69	-2.9
4,185,141	+		MPMX20_03990	0.70	+0.7
4,185,156	+		MPMX20_03990	0.72	-2.3
4,185,198	-		MPMX20_03990	0.76	+1.2
4,185,198	-		MPMX20_03990	0.76	+0.3
4,185,203	+		MPMX20_03990	0.76	-0.3
4,185,203	+		MPMX20_03990	0.76	-0.2
4,185,203	+		MPMX20_03990	0.76	+0.6
4,185,203	+		MPMX20_03990	0.76	+0.0
4,185,211	-		MPMX20_03990	0.77	+1.1
4,185,211	-		MPMX20_03990	0.77	+0.4
4,185,211	-		MPMX20_03990	0.77	-0.4
4,185,211	-		MPMX20_03990	0.77	+0.5
4,185,211	-		MPMX20_03990	0.77	-3.4
4,185,211	-		MPMX20_03990	0.77	+1.4
4,185,211	-		MPMX20_03990	0.77	-0.0
4,185,211	-		MPMX20_03990	0.77	+0.7
4,185,211	-		MPMX20_03990	0.77	-3.0
4,185,211	-		MPMX20_03990	0.77	-0.7
4,185,259	+		MPMX20_03990	0.82	+3.0
4,185,259	+		MPMX20_03990	0.82	-2.2
4,185,284	-		MPMX20_03990	0.84	+0.2
4,185,307	+		MPMX20_03990	0.86	+0.0
4,185,327	+		MPMX20_03990	0.88	-2.8