Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00129

Experiment: D-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00128 and MPMX20_00129 are separated by 182 nucleotidesMPMX20_00129 and MPMX20_00130 overlap by 4 nucleotidesMPMX20_00130 and MPMX20_00131 overlap by 4 nucleotides MPMX20_00128: MPMX20_00128 - 4-hydroxybenzoate transporter PcaK, at 128,306 to 129,646 _00128 MPMX20_00129: MPMX20_00129 - L-lactate dehydrogenase, at 129,829 to 131,016 _00129 MPMX20_00130: MPMX20_00130 - Putative L-lactate dehydrogenase operon regulatory protein, at 131,013 to 131,786 _00130 MPMX20_00131: MPMX20_00131 - L-lactate permease, at 131,783 to 133,438 _00131 Position (kb) 129 130 131 132Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 128.868 kb on - strand, within MPMX20_00128at 128.904 kb on - strand, within MPMX20_00128at 128.956 kb on + strand, within MPMX20_00128at 128.968 kb on - strand, within MPMX20_00128at 129.011 kb on - strand, within MPMX20_00128at 129.070 kb on + strand, within MPMX20_00128at 129.078 kb on - strand, within MPMX20_00128at 129.085 kb on + strand, within MPMX20_00128at 129.085 kb on - strand, within MPMX20_00128at 129.103 kb on + strand, within MPMX20_00128at 129.106 kb on - strand, within MPMX20_00128at 129.109 kb on + strand, within MPMX20_00128at 129.111 kb on - strand, within MPMX20_00128at 129.111 kb on - strand, within MPMX20_00128at 129.111 kb on - strand, within MPMX20_00128at 129.127 kb on - strand, within MPMX20_00128at 129.138 kb on - strand, within MPMX20_00128at 129.143 kb on - strand, within MPMX20_00128at 129.239 kb on - strand, within MPMX20_00128at 129.261 kb on + strand, within MPMX20_00128at 129.442 kb on + strand, within MPMX20_00128at 129.442 kb on + strand, within MPMX20_00128at 129.442 kb on + strand, within MPMX20_00128at 129.457 kb on - strand, within MPMX20_00128at 129.510 kb on + strand, within MPMX20_00128at 129.510 kb on + strand, within MPMX20_00128at 129.513 kb on - strandat 129.518 kb on - strandat 129.538 kb on - strandat 129.560 kb on + strandat 129.560 kb on + strandat 129.568 kb on - strandat 129.650 kb on - strandat 129.654 kb on + strandat 129.654 kb on + strandat 129.662 kb on - strandat 129.797 kb on - strandat 129.802 kb on + strandat 129.814 kb on - strandat 129.841 kb on + strandat 129.844 kb on - strandat 129.931 kb on + strandat 129.939 kb on - strandat 129.973 kb on + strand, within MPMX20_00129at 129.991 kb on + strand, within MPMX20_00129at 129.994 kb on - strand, within MPMX20_00129at 130.001 kb on + strand, within MPMX20_00129at 130.001 kb on + strand, within MPMX20_00129at 130.001 kb on + strand, within MPMX20_00129at 130.001 kb on + strand, within MPMX20_00129at 130.001 kb on + strand, within MPMX20_00129at 130.001 kb on + strand, within MPMX20_00129at 130.001 kb on + strand, within MPMX20_00129at 130.001 kb on + strand, within MPMX20_00129at 130.001 kb on + strand, within MPMX20_00129at 130.001 kb on + strand, within MPMX20_00129at 130.009 kb on - strand, within MPMX20_00129at 130.009 kb on - strand, within MPMX20_00129at 130.009 kb on - strand, within MPMX20_00129at 130.009 kb on - strand, within MPMX20_00129at 130.009 kb on - strand, within MPMX20_00129at 130.009 kb on - strand, within MPMX20_00129at 130.009 kb on - strand, within MPMX20_00129at 130.009 kb on - strand, within MPMX20_00129at 130.009 kb on - strand, within MPMX20_00129at 130.009 kb on - strand, within MPMX20_00129at 130.013 kb on + strand, within MPMX20_00129at 130.021 kb on - strand, within MPMX20_00129at 130.043 kb on - strand, within MPMX20_00129at 130.160 kb on + strand, within MPMX20_00129at 130.194 kb on + strand, within MPMX20_00129at 130.201 kb on + strand, within MPMX20_00129at 130.209 kb on - strand, within MPMX20_00129at 130.211 kb on - strand, within MPMX20_00129at 130.211 kb on - strand, within MPMX20_00129at 130.233 kb on - strand, within MPMX20_00129at 130.280 kb on - strand, within MPMX20_00129at 130.280 kb on - strand, within MPMX20_00129at 130.297 kb on + strand, within MPMX20_00129at 130.303 kb on + strand, within MPMX20_00129at 130.303 kb on + strand, within MPMX20_00129at 130.370 kb on - strand, within MPMX20_00129at 130.409 kb on - strand, within MPMX20_00129at 130.464 kb on + strand, within MPMX20_00129at 130.558 kb on + strand, within MPMX20_00129at 130.563 kb on + strand, within MPMX20_00129at 130.563 kb on + strand, within MPMX20_00129at 130.563 kb on + strand, within MPMX20_00129at 130.563 kb on + strand, within MPMX20_00129at 130.571 kb on - strand, within MPMX20_00129at 130.571 kb on - strand, within MPMX20_00129at 130.571 kb on - strand, within MPMX20_00129at 130.571 kb on - strand, within MPMX20_00129at 130.576 kb on - strand, within MPMX20_00129at 130.580 kb on + strand, within MPMX20_00129at 130.580 kb on + strand, within MPMX20_00129at 130.588 kb on - strand, within MPMX20_00129at 130.588 kb on - strand, within MPMX20_00129at 130.599 kb on - strand, within MPMX20_00129at 130.599 kb on - strand, within MPMX20_00129at 130.636 kb on - strand, within MPMX20_00129at 130.643 kb on - strand, within MPMX20_00129at 130.668 kb on - strand, within MPMX20_00129at 130.669 kb on - strand, within MPMX20_00129at 130.683 kb on + strand, within MPMX20_00129at 130.704 kb on + strand, within MPMX20_00129at 130.704 kb on + strand, within MPMX20_00129at 130.712 kb on - strand, within MPMX20_00129at 130.749 kb on - strand, within MPMX20_00129at 130.832 kb on + strand, within MPMX20_00129at 130.841 kb on - strand, within MPMX20_00129at 130.853 kb on - strand, within MPMX20_00129at 130.904 kb on + strandat 130.914 kb on + strandat 130.922 kb on - strandat 130.933 kb on - strandat 131.025 kb on - strandat 131.104 kb on - strand, within MPMX20_00130at 131.112 kb on + strand, within MPMX20_00130at 131.126 kb on - strand, within MPMX20_00130at 131.126 kb on - strand, within MPMX20_00130at 131.230 kb on - strand, within MPMX20_00130at 131.236 kb on - strand, within MPMX20_00130at 131.268 kb on - strand, within MPMX20_00130at 131.270 kb on + strand, within MPMX20_00130at 131.298 kb on - strand, within MPMX20_00130at 131.298 kb on - strand, within MPMX20_00130at 131.298 kb on - strand, within MPMX20_00130at 131.346 kb on - strand, within MPMX20_00130at 131.359 kb on - strand, within MPMX20_00130at 131.376 kb on + strand, within MPMX20_00130at 131.384 kb on - strand, within MPMX20_00130at 131.395 kb on - strand, within MPMX20_00130at 131.397 kb on + strand, within MPMX20_00130at 131.501 kb on - strand, within MPMX20_00130at 131.549 kb on - strand, within MPMX20_00130at 131.554 kb on - strand, within MPMX20_00130at 131.556 kb on + strand, within MPMX20_00130at 131.556 kb on + strand, within MPMX20_00130at 131.589 kb on + strand, within MPMX20_00130at 131.603 kb on + strand, within MPMX20_00130at 131.614 kb on - strand, within MPMX20_00130at 131.619 kb on + strand, within MPMX20_00130at 131.663 kb on - strand, within MPMX20_00130at 131.773 kb on - strandat 131.798 kb on + strandat 131.818 kb on - strandat 131.818 kb on - strandat 131.820 kb on + strandat 131.828 kb on - strandat 131.843 kb on + strandat 131.843 kb on + strandat 131.851 kb on - strandat 131.856 kb on - strandat 131.879 kb on - strandat 131.882 kb on + strandat 131.892 kb on + strandat 131.918 kb on + strandat 132.016 kb on - strand, within MPMX20_00131

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Lactate (C)
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128,868 - MPMX20_00128 0.42 +1.0
128,904 - MPMX20_00128 0.45 +1.7
128,956 + MPMX20_00128 0.48 +0.5
128,968 - MPMX20_00128 0.49 +1.2
129,011 - MPMX20_00128 0.53 +1.0
129,070 + MPMX20_00128 0.57 +1.2
129,078 - MPMX20_00128 0.58 +3.5
129,085 + MPMX20_00128 0.58 +0.4
129,085 - MPMX20_00128 0.58 -0.1
129,103 + MPMX20_00128 0.59 +2.7
129,106 - MPMX20_00128 0.60 -1.6
129,109 + MPMX20_00128 0.60 +0.2
129,111 - MPMX20_00128 0.60 -1.9
129,111 - MPMX20_00128 0.60 -1.7
129,111 - MPMX20_00128 0.60 -0.0
129,127 - MPMX20_00128 0.61 +0.9
129,138 - MPMX20_00128 0.62 +1.3
129,143 - MPMX20_00128 0.62 +0.6
129,239 - MPMX20_00128 0.70 +0.4
129,261 + MPMX20_00128 0.71 +1.5
129,442 + MPMX20_00128 0.85 +0.6
129,442 + MPMX20_00128 0.85 +2.4
129,442 + MPMX20_00128 0.85 +2.1
129,457 - MPMX20_00128 0.86 +1.3
129,510 + MPMX20_00128 0.90 +0.5
129,510 + MPMX20_00128 0.90 +0.2
129,513 - +0.9
129,518 - -1.0
129,538 - +1.4
129,560 + -0.3
129,560 + +0.7
129,568 - -0.1
129,650 - +0.3
129,654 + -0.1
129,654 + +0.7
129,662 - +3.4
129,797 - +0.8
129,802 + +3.5
129,814 - -0.8
129,841 + -1.0
129,844 - +2.2
129,931 + +3.0
129,939 - +2.4
129,973 + MPMX20_00129 0.12 +2.6
129,991 + MPMX20_00129 0.14 +0.3
129,994 - MPMX20_00129 0.14 +2.3
130,001 + MPMX20_00129 0.14 +4.2
130,001 + MPMX20_00129 0.14 +0.4
130,001 + MPMX20_00129 0.14 +0.9
130,001 + MPMX20_00129 0.14 +2.0
130,001 + MPMX20_00129 0.14 -0.8
130,001 + MPMX20_00129 0.14 +0.6
130,001 + MPMX20_00129 0.14 +0.1
130,001 + MPMX20_00129 0.14 +0.8
130,001 + MPMX20_00129 0.14 +0.3
130,001 + MPMX20_00129 0.14 +2.1
130,009 - MPMX20_00129 0.15 +2.5
130,009 - MPMX20_00129 0.15 +4.2
130,009 - MPMX20_00129 0.15 +3.1
130,009 - MPMX20_00129 0.15 +3.6
130,009 - MPMX20_00129 0.15 +2.1
130,009 - MPMX20_00129 0.15 +2.4
130,009 - MPMX20_00129 0.15 +1.8
130,009 - MPMX20_00129 0.15 +0.7
130,009 - MPMX20_00129 0.15 +3.1
130,009 - MPMX20_00129 0.15 +1.1
130,013 + MPMX20_00129 0.15 +1.1
130,021 - MPMX20_00129 0.16 +1.7
130,043 - MPMX20_00129 0.18 +2.5
130,160 + MPMX20_00129 0.28 +1.4
130,194 + MPMX20_00129 0.31 +2.5
130,201 + MPMX20_00129 0.31 +2.8
130,209 - MPMX20_00129 0.32 +3.0
130,211 - MPMX20_00129 0.32 +3.5
130,211 - MPMX20_00129 0.32 +2.5
130,233 - MPMX20_00129 0.34 +2.4
130,280 - MPMX20_00129 0.38 +0.2
130,280 - MPMX20_00129 0.38 +2.6
130,297 + MPMX20_00129 0.39 +2.8
130,303 + MPMX20_00129 0.40 +1.7
130,303 + MPMX20_00129 0.40 +1.6
130,370 - MPMX20_00129 0.46 -0.9
130,409 - MPMX20_00129 0.49 +3.1
130,464 + MPMX20_00129 0.53 +2.0
130,558 + MPMX20_00129 0.61 +3.1
130,563 + MPMX20_00129 0.62 -1.2
130,563 + MPMX20_00129 0.62 -1.0
130,563 + MPMX20_00129 0.62 -1.8
130,563 + MPMX20_00129 0.62 +2.1
130,571 - MPMX20_00129 0.62 +2.7
130,571 - MPMX20_00129 0.62 +3.2
130,571 - MPMX20_00129 0.62 -0.1
130,571 - MPMX20_00129 0.62 +2.2
130,576 - MPMX20_00129 0.63 -0.7
130,580 + MPMX20_00129 0.63 +3.4
130,580 + MPMX20_00129 0.63 -0.1
130,588 - MPMX20_00129 0.64 +2.6
130,588 - MPMX20_00129 0.64 +2.1
130,599 - MPMX20_00129 0.65 -2.6
130,599 - MPMX20_00129 0.65 +1.6
130,636 - MPMX20_00129 0.68 +2.2
130,643 - MPMX20_00129 0.69 +2.7
130,668 - MPMX20_00129 0.71 +2.7
130,669 - MPMX20_00129 0.71 +2.9
130,683 + MPMX20_00129 0.72 +2.8
130,704 + MPMX20_00129 0.74 +1.0
130,704 + MPMX20_00129 0.74 +1.6
130,712 - MPMX20_00129 0.74 +2.8
130,749 - MPMX20_00129 0.77 +4.5
130,832 + MPMX20_00129 0.84 +1.2
130,841 - MPMX20_00129 0.85 +3.1
130,853 - MPMX20_00129 0.86 +2.2
130,904 + +0.6
130,914 + +0.0
130,922 - +1.2
130,933 - +2.9
131,025 - +4.4
131,104 - MPMX20_00130 0.12 +5.9
131,112 + MPMX20_00130 0.13 -0.4
131,126 - MPMX20_00130 0.15 +2.4
131,126 - MPMX20_00130 0.15 +2.0
131,230 - MPMX20_00130 0.28 -1.3
131,236 - MPMX20_00130 0.29 -0.6
131,268 - MPMX20_00130 0.33 +0.2
131,270 + MPMX20_00130 0.33 -1.4
131,298 - MPMX20_00130 0.37 +1.2
131,298 - MPMX20_00130 0.37 +0.2
131,298 - MPMX20_00130 0.37 -0.6
131,346 - MPMX20_00130 0.43 +1.9
131,359 - MPMX20_00130 0.45 -0.6
131,376 + MPMX20_00130 0.47 -2.2
131,384 - MPMX20_00130 0.48 +0.8
131,395 - MPMX20_00130 0.49 +0.9
131,397 + MPMX20_00130 0.50 +0.3
131,501 - MPMX20_00130 0.63 +0.5
131,549 - MPMX20_00130 0.69 +0.4
131,554 - MPMX20_00130 0.70 +0.3
131,556 + MPMX20_00130 0.70 -0.4
131,556 + MPMX20_00130 0.70 +1.7
131,589 + MPMX20_00130 0.74 -0.5
131,603 + MPMX20_00130 0.76 -0.3
131,614 - MPMX20_00130 0.78 +1.6
131,619 + MPMX20_00130 0.78 -0.5
131,663 - MPMX20_00130 0.84 +0.2
131,773 - -0.7
131,798 + +0.2
131,818 - -1.4
131,818 - -1.8
131,820 + -1.5
131,828 - -1.2
131,843 + -0.9
131,843 + +0.2
131,851 - -1.4
131,856 - -0.9
131,879 - -0.1
131,882 + -1.3
131,892 + -1.4
131,918 + +0.4
132,016 - MPMX20_00131 0.14 -2.6

Or see this region's nucleotide sequence