Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04261 and MPMX20_04262 overlap by 4 nucleotides MPMX20_04262 and MPMX20_04263 are separated by 86 nucleotides MPMX20_04263 and MPMX20_04264 are separated by 30 nucleotides
MPMX20_04261: MPMX20_04261 - hypothetical protein, at 4,442,693 to 4,444,780
_04261
MPMX20_04262: MPMX20_04262 - Acetylornithine/succinyldiaminopimelate aminotransferase, at 4,444,777 to 4,445,997
_04262
MPMX20_04263: MPMX20_04263 - Aminodeoxychorismate synthase component 2, at 4,446,084 to 4,446,647
_04263
MPMX20_04264: MPMX20_04264 - putative protein adenylyltransferase Fic, at 4,446,678 to 4,447,280
_04264
Position (kb)
4444
4445
4446 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4443.784 kb on + strand, within MPMX20_04261 at 4443.792 kb on - strand, within MPMX20_04261 at 4443.792 kb on - strand, within MPMX20_04261 at 4443.802 kb on - strand, within MPMX20_04261 at 4443.981 kb on + strand, within MPMX20_04261 at 4444.081 kb on - strand, within MPMX20_04261 at 4444.096 kb on + strand, within MPMX20_04261 at 4444.111 kb on - strand, within MPMX20_04261 at 4444.112 kb on - strand, within MPMX20_04261 at 4444.209 kb on - strand, within MPMX20_04261 at 4444.260 kb on - strand, within MPMX20_04261 at 4444.333 kb on + strand, within MPMX20_04261 at 4444.416 kb on + strand, within MPMX20_04261 at 4444.423 kb on + strand, within MPMX20_04261 at 4444.423 kb on + strand, within MPMX20_04261 at 4444.423 kb on + strand, within MPMX20_04261 at 4444.431 kb on - strand, within MPMX20_04261 at 4444.444 kb on + strand, within MPMX20_04261 at 4444.468 kb on - strand, within MPMX20_04261 at 4444.491 kb on + strand, within MPMX20_04261 at 4444.557 kb on - strand, within MPMX20_04261 at 4444.650 kb on + strand at 4444.658 kb on - strand at 4444.684 kb on + strand at 4444.684 kb on + strand at 4444.701 kb on + strand at 4444.740 kb on + strand at 4444.816 kb on + strand at 4444.868 kb on - strand at 4444.951 kb on - strand, within MPMX20_04262 at 4444.963 kb on - strand, within MPMX20_04262 at 4444.983 kb on - strand, within MPMX20_04262 at 4445.010 kb on - strand, within MPMX20_04262 at 4445.079 kb on + strand, within MPMX20_04262 at 4445.087 kb on - strand, within MPMX20_04262 at 4445.098 kb on + strand, within MPMX20_04262 at 4445.242 kb on + strand, within MPMX20_04262 at 4445.250 kb on - strand, within MPMX20_04262 at 4445.300 kb on - strand, within MPMX20_04262 at 4445.511 kb on + strand, within MPMX20_04262 at 4445.529 kb on + strand, within MPMX20_04262 at 4445.689 kb on + strand, within MPMX20_04262 at 4445.788 kb on - strand, within MPMX20_04262 at 4445.811 kb on + strand, within MPMX20_04262 at 4445.819 kb on - strand, within MPMX20_04262 at 4445.849 kb on - strand, within MPMX20_04262 at 4446.118 kb on - strand at 4446.133 kb on - strand at 4446.165 kb on - strand, within MPMX20_04263 at 4446.187 kb on + strand, within MPMX20_04263 at 4446.221 kb on + strand, within MPMX20_04263 at 4446.247 kb on - strand, within MPMX20_04263 at 4446.260 kb on + strand, within MPMX20_04263 at 4446.291 kb on + strand, within MPMX20_04263 at 4446.303 kb on + strand, within MPMX20_04263 at 4446.325 kb on - strand, within MPMX20_04263 at 4446.353 kb on + strand, within MPMX20_04263 at 4446.404 kb on - strand, within MPMX20_04263 at 4446.405 kb on - strand, within MPMX20_04263 at 4446.413 kb on - strand, within MPMX20_04263 at 4446.500 kb on + strand, within MPMX20_04263 at 4446.506 kb on + strand, within MPMX20_04263 at 4446.531 kb on + strand, within MPMX20_04263 at 4446.572 kb on + strand, within MPMX20_04263 at 4446.572 kb on + strand, within MPMX20_04263 at 4446.605 kb on + strand at 4446.605 kb on + strand at 4446.606 kb on - strand at 4446.683 kb on - strand at 4446.748 kb on + strand, within MPMX20_04264 at 4446.791 kb on + strand, within MPMX20_04264 at 4446.848 kb on + strand, within MPMX20_04264 at 4446.874 kb on + strand, within MPMX20_04264 at 4446.940 kb on + strand, within MPMX20_04264 at 4446.959 kb on - strand, within MPMX20_04264
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 4,443,784 + MPMX20_04261 0.52 +0.8 4,443,792 - MPMX20_04261 0.53 -0.1 4,443,792 - MPMX20_04261 0.53 -0.3 4,443,802 - MPMX20_04261 0.53 +1.5 4,443,981 + MPMX20_04261 0.62 +0.5 4,444,081 - MPMX20_04261 0.66 +0.6 4,444,096 + MPMX20_04261 0.67 +0.1 4,444,111 - MPMX20_04261 0.68 +0.9 4,444,112 - MPMX20_04261 0.68 +0.6 4,444,209 - MPMX20_04261 0.73 -0.2 4,444,260 - MPMX20_04261 0.75 +0.7 4,444,333 + MPMX20_04261 0.79 +1.8 4,444,416 + MPMX20_04261 0.83 +0.2 4,444,423 + MPMX20_04261 0.83 +2.3 4,444,423 + MPMX20_04261 0.83 +1.0 4,444,423 + MPMX20_04261 0.83 -1.5 4,444,431 - MPMX20_04261 0.83 +0.8 4,444,444 + MPMX20_04261 0.84 -0.7 4,444,468 - MPMX20_04261 0.85 +0.0 4,444,491 + MPMX20_04261 0.86 +0.2 4,444,557 - MPMX20_04261 0.89 +0.6 4,444,650 + -1.2 4,444,658 - -0.0 4,444,684 + +0.6 4,444,684 + +0.5 4,444,701 + -2.9 4,444,740 + +0.0 4,444,816 + -1.5 4,444,868 - -1.0 4,444,951 - MPMX20_04262 0.14 -0.3 4,444,963 - MPMX20_04262 0.15 -0.7 4,444,983 - MPMX20_04262 0.17 -2.5 4,445,010 - MPMX20_04262 0.19 -3.8 4,445,079 + MPMX20_04262 0.25 -2.2 4,445,087 - MPMX20_04262 0.25 -2.0 4,445,098 + MPMX20_04262 0.26 -2.3 4,445,242 + MPMX20_04262 0.38 -2.5 4,445,250 - MPMX20_04262 0.39 -2.9 4,445,300 - MPMX20_04262 0.43 -3.0 4,445,511 + MPMX20_04262 0.60 -2.4 4,445,529 + MPMX20_04262 0.62 -1.5 4,445,689 + MPMX20_04262 0.75 -1.6 4,445,788 - MPMX20_04262 0.83 -1.7 4,445,811 + MPMX20_04262 0.85 -1.5 4,445,819 - MPMX20_04262 0.85 -1.6 4,445,849 - MPMX20_04262 0.88 -1.7 4,446,118 - -0.1 4,446,133 - +0.6 4,446,165 - MPMX20_04263 0.14 -0.5 4,446,187 + MPMX20_04263 0.18 +0.2 4,446,221 + MPMX20_04263 0.24 +0.8 4,446,247 - MPMX20_04263 0.29 +0.8 4,446,260 + MPMX20_04263 0.31 -0.2 4,446,291 + MPMX20_04263 0.37 -1.4 4,446,303 + MPMX20_04263 0.39 -0.2 4,446,325 - MPMX20_04263 0.43 +0.0 4,446,353 + MPMX20_04263 0.48 +0.8 4,446,404 - MPMX20_04263 0.57 +1.9 4,446,405 - MPMX20_04263 0.57 -2.3 4,446,413 - MPMX20_04263 0.58 -1.5 4,446,500 + MPMX20_04263 0.74 -1.4 4,446,506 + MPMX20_04263 0.75 +0.8 4,446,531 + MPMX20_04263 0.79 -1.4 4,446,572 + MPMX20_04263 0.87 -1.2 4,446,572 + MPMX20_04263 0.87 +0.2 4,446,605 + -1.3 4,446,605 + -0.1 4,446,606 - +0.5 4,446,683 - -0.8 4,446,748 + MPMX20_04264 0.12 +0.7 4,446,791 + MPMX20_04264 0.19 +0.2 4,446,848 + MPMX20_04264 0.28 +0.2 4,446,874 + MPMX20_04264 0.33 -1.3 4,446,940 + MPMX20_04264 0.43 +0.6 4,446,959 - MPMX20_04264 0.47 +1.6
Or see this region's nucleotide sequence