Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00051 and MPMX20_00052 are separated by 17 nucleotides MPMX20_00052 and MPMX20_00053 are separated by 11 nucleotides MPMX20_00053 and MPMX20_00054 are separated by 293 nucleotides
MPMX20_00051: MPMX20_00051 - 6-phospho-beta-glucosidase GmuD, at 50,165 to 51,547
_00051
MPMX20_00052: MPMX20_00052 - Lichenan permease IIC component, at 51,565 to 52,890
_00052
MPMX20_00053: MPMX20_00053 - PTS system cellobiose-specific EIIB component, at 52,902 to 53,216
_00053
MPMX20_00054: MPMX20_00054 - Catabolite control protein A, at 53,510 to 54,460
_00054
Position (kb) 51
52
53 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 50.565 kb on - strand, within MPMX20_00051 at 50.565 kb on - strand, within MPMX20_00051 at 50.565 kb on - strand, within MPMX20_00051 at 50.565 kb on - strand, within MPMX20_00051 at 50.566 kb on - strand, within MPMX20_00051 at 50.566 kb on - strand, within MPMX20_00051 at 50.566 kb on - strand, within MPMX20_00051 at 50.566 kb on - strand, within MPMX20_00051 at 50.566 kb on - strand, within MPMX20_00051 at 50.566 kb on - strand, within MPMX20_00051 at 50.566 kb on - strand, within MPMX20_00051 at 50.566 kb on - strand, within MPMX20_00051 at 50.570 kb on - strand, within MPMX20_00051 at 50.571 kb on - strand, within MPMX20_00051 at 50.571 kb on - strand, within MPMX20_00051 at 50.571 kb on - strand, within MPMX20_00051 at 50.582 kb on + strand, within MPMX20_00051 at 50.584 kb on - strand, within MPMX20_00051 at 50.608 kb on - strand, within MPMX20_00051 at 50.610 kb on + strand, within MPMX20_00051 at 50.611 kb on - strand, within MPMX20_00051 at 50.614 kb on - strand, within MPMX20_00051 at 50.616 kb on + strand, within MPMX20_00051 at 50.616 kb on + strand, within MPMX20_00051 at 50.618 kb on - strand, within MPMX20_00051 at 50.618 kb on - strand, within MPMX20_00051 at 50.622 kb on + strand, within MPMX20_00051 at 50.624 kb on - strand, within MPMX20_00051 at 50.624 kb on - strand, within MPMX20_00051 at 50.625 kb on + strand, within MPMX20_00051 at 50.628 kb on - strand, within MPMX20_00051 at 50.630 kb on + strand, within MPMX20_00051 at 50.630 kb on - strand, within MPMX20_00051 at 50.630 kb on - strand, within MPMX20_00051 at 50.631 kb on - strand, within MPMX20_00051 at 50.631 kb on - strand, within MPMX20_00051 at 50.631 kb on - strand, within MPMX20_00051 at 50.631 kb on - strand, within MPMX20_00051 at 50.631 kb on - strand, within MPMX20_00051 at 50.638 kb on - strand, within MPMX20_00051 at 50.642 kb on - strand, within MPMX20_00051 at 50.643 kb on - strand, within MPMX20_00051 at 50.648 kb on - strand, within MPMX20_00051 at 50.648 kb on - strand, within MPMX20_00051 at 50.650 kb on - strand, within MPMX20_00051 at 50.658 kb on - strand, within MPMX20_00051 at 50.668 kb on + strand, within MPMX20_00051 at 50.673 kb on - strand, within MPMX20_00051 at 50.673 kb on - strand, within MPMX20_00051 at 50.673 kb on - strand, within MPMX20_00051 at 50.674 kb on + strand, within MPMX20_00051 at 50.676 kb on - strand, within MPMX20_00051 at 50.679 kb on + strand, within MPMX20_00051 at 50.682 kb on - strand, within MPMX20_00051 at 50.682 kb on - strand, within MPMX20_00051 at 50.687 kb on - strand, within MPMX20_00051 at 50.687 kb on - strand, within MPMX20_00051 at 50.728 kb on - strand, within MPMX20_00051 at 50.728 kb on - strand, within MPMX20_00051 at 50.728 kb on - strand, within MPMX20_00051 at 50.754 kb on + strand, within MPMX20_00051 at 50.797 kb on + strand, within MPMX20_00051 at 50.802 kb on + strand, within MPMX20_00051 at 50.805 kb on - strand, within MPMX20_00051 at 50.805 kb on - strand, within MPMX20_00051 at 50.805 kb on - strand, within MPMX20_00051 at 50.823 kb on + strand, within MPMX20_00051 at 50.827 kb on - strand, within MPMX20_00051 at 50.828 kb on - strand, within MPMX20_00051 at 50.840 kb on + strand, within MPMX20_00051 at 50.847 kb on + strand, within MPMX20_00051 at 50.848 kb on - strand, within MPMX20_00051 at 50.871 kb on - strand, within MPMX20_00051 at 50.882 kb on + strand, within MPMX20_00051 at 50.882 kb on + strand, within MPMX20_00051 at 50.887 kb on + strand, within MPMX20_00051 at 50.889 kb on + strand, within MPMX20_00051 at 50.894 kb on + strand, within MPMX20_00051 at 50.899 kb on + strand, within MPMX20_00051 at 50.919 kb on + strand, within MPMX20_00051 at 50.922 kb on - strand, within MPMX20_00051 at 50.922 kb on - strand, within MPMX20_00051 at 50.922 kb on - strand, within MPMX20_00051 at 50.968 kb on - strand, within MPMX20_00051 at 50.968 kb on - strand, within MPMX20_00051 at 50.968 kb on - strand, within MPMX20_00051 at 50.968 kb on - strand, within MPMX20_00051 at 51.027 kb on - strand, within MPMX20_00051 at 51.028 kb on - strand, within MPMX20_00051 at 51.108 kb on + strand, within MPMX20_00051 at 51.203 kb on - strand, within MPMX20_00051 at 51.215 kb on + strand, within MPMX20_00051 at 51.217 kb on + strand, within MPMX20_00051 at 51.217 kb on + strand, within MPMX20_00051 at 51.219 kb on + strand, within MPMX20_00051 at 51.219 kb on + strand, within MPMX20_00051 at 51.219 kb on + strand, within MPMX20_00051 at 51.219 kb on + strand, within MPMX20_00051 at 51.219 kb on + strand, within MPMX20_00051 at 51.219 kb on + strand, within MPMX20_00051 at 51.225 kb on - strand, within MPMX20_00051 at 51.227 kb on - strand, within MPMX20_00051 at 51.227 kb on - strand, within MPMX20_00051 at 51.227 kb on - strand, within MPMX20_00051 at 51.227 kb on - strand, within MPMX20_00051 at 51.227 kb on - strand, within MPMX20_00051 at 51.238 kb on + strand, within MPMX20_00051 at 51.243 kb on + strand, within MPMX20_00051 at 51.251 kb on - strand, within MPMX20_00051 at 51.283 kb on + strand, within MPMX20_00051 at 51.302 kb on + strand, within MPMX20_00051 at 51.360 kb on - strand, within MPMX20_00051 at 51.398 kb on + strand, within MPMX20_00051 at 51.406 kb on - strand, within MPMX20_00051 at 51.406 kb on - strand, within MPMX20_00051 at 51.406 kb on - strand, within MPMX20_00051 at 51.412 kb on - strand at 51.417 kb on - strand at 51.417 kb on - strand at 51.464 kb on - strand at 51.465 kb on + strand at 51.473 kb on - strand at 51.475 kb on + strand at 51.488 kb on + strand at 51.496 kb on - strand at 51.578 kb on - strand at 51.606 kb on - strand at 51.669 kb on + strand at 51.672 kb on - strand at 51.756 kb on - strand, within MPMX20_00052 at 51.765 kb on + strand, within MPMX20_00052 at 51.765 kb on + strand, within MPMX20_00052 at 51.765 kb on + strand, within MPMX20_00052 at 51.783 kb on + strand, within MPMX20_00052 at 51.791 kb on - strand, within MPMX20_00052 at 51.859 kb on - strand, within MPMX20_00052 at 51.955 kb on - strand, within MPMX20_00052 at 51.962 kb on - strand, within MPMX20_00052 at 51.965 kb on + strand, within MPMX20_00052 at 52.046 kb on + strand, within MPMX20_00052 at 52.055 kb on - strand, within MPMX20_00052 at 52.118 kb on + strand, within MPMX20_00052 at 52.147 kb on + strand, within MPMX20_00052 at 52.195 kb on - strand, within MPMX20_00052 at 52.200 kb on - strand, within MPMX20_00052 at 52.301 kb on - strand, within MPMX20_00052 at 52.310 kb on + strand, within MPMX20_00052 at 52.313 kb on + strand, within MPMX20_00052 at 52.316 kb on - strand, within MPMX20_00052 at 52.341 kb on + strand, within MPMX20_00052 at 52.354 kb on + strand, within MPMX20_00052 at 52.407 kb on - strand, within MPMX20_00052 at 52.439 kb on + strand, within MPMX20_00052 at 52.447 kb on - strand, within MPMX20_00052 at 52.484 kb on + strand, within MPMX20_00052 at 52.573 kb on - strand, within MPMX20_00052 at 52.579 kb on + strand, within MPMX20_00052 at 52.579 kb on + strand, within MPMX20_00052 at 52.590 kb on + strand, within MPMX20_00052 at 52.592 kb on - strand, within MPMX20_00052 at 52.592 kb on - strand, within MPMX20_00052 at 52.598 kb on - strand, within MPMX20_00052 at 52.629 kb on + strand, within MPMX20_00052 at 52.633 kb on - strand, within MPMX20_00052 at 52.643 kb on - strand, within MPMX20_00052 at 52.661 kb on + strand, within MPMX20_00052 at 52.669 kb on - strand, within MPMX20_00052 at 52.699 kb on + strand, within MPMX20_00052 at 52.732 kb on + strand, within MPMX20_00052 at 52.751 kb on - strand, within MPMX20_00052 at 52.810 kb on - strand at 52.893 kb on - strand at 52.906 kb on - strand at 52.906 kb on - strand at 52.925 kb on + strand at 52.930 kb on + strand at 52.930 kb on + strand at 52.933 kb on - strand at 52.935 kb on + strand, within MPMX20_00053 at 52.935 kb on + strand, within MPMX20_00053 at 52.935 kb on + strand, within MPMX20_00053 at 52.936 kb on - strand, within MPMX20_00053 at 52.943 kb on - strand, within MPMX20_00053 at 52.943 kb on - strand, within MPMX20_00053 at 52.953 kb on + strand, within MPMX20_00053 at 52.953 kb on + strand, within MPMX20_00053 at 52.956 kb on + strand, within MPMX20_00053 at 52.963 kb on + strand, within MPMX20_00053 at 53.016 kb on + strand, within MPMX20_00053 at 53.016 kb on + strand, within MPMX20_00053 at 53.024 kb on - strand, within MPMX20_00053 at 53.024 kb on - strand, within MPMX20_00053 at 53.065 kb on + strand, within MPMX20_00053 at 53.065 kb on + strand, within MPMX20_00053 at 53.065 kb on + strand, within MPMX20_00053 at 53.065 kb on + strand, within MPMX20_00053 at 53.073 kb on - strand, within MPMX20_00053 at 53.102 kb on + strand, within MPMX20_00053 at 53.181 kb on + strand, within MPMX20_00053 at 53.199 kb on - strand at 53.310 kb on - strand at 53.311 kb on - strand at 53.449 kb on + strand at 53.457 kb on - strand at 53.480 kb on + strand at 53.548 kb on + strand at 53.548 kb on + strand at 53.548 kb on + strand at 53.569 kb on + strand at 53.589 kb on + strand at 53.597 kb on - strand at 53.597 kb on - strand at 53.602 kb on - strand at 53.605 kb on + strand, within MPMX20_00054 at 53.665 kb on + strand, within MPMX20_00054 at 53.669 kb on + strand, within MPMX20_00054 at 53.669 kb on + strand, within MPMX20_00054 at 53.669 kb on + strand, within MPMX20_00054 at 53.691 kb on + strand, within MPMX20_00054 at 53.696 kb on + strand, within MPMX20_00054 at 53.696 kb on + strand, within MPMX20_00054 at 53.726 kb on - strand, within MPMX20_00054 at 53.768 kb on - strand, within MPMX20_00054 at 53.869 kb on - strand, within MPMX20_00054
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 50,565 - MPMX20_00051 0.29 -2.6 50,565 - MPMX20_00051 0.29 +0.3 50,565 - MPMX20_00051 0.29 -1.8 50,565 - MPMX20_00051 0.29 -0.9 50,566 - MPMX20_00051 0.29 +3.4 50,566 - MPMX20_00051 0.29 -1.2 50,566 - MPMX20_00051 0.29 -1.7 50,566 - MPMX20_00051 0.29 -2.6 50,566 - MPMX20_00051 0.29 -2.7 50,566 - MPMX20_00051 0.29 -1.9 50,566 - MPMX20_00051 0.29 +0.4 50,566 - MPMX20_00051 0.29 -2.4 50,570 - MPMX20_00051 0.29 +0.2 50,571 - MPMX20_00051 0.29 -2.5 50,571 - MPMX20_00051 0.29 -1.3 50,571 - MPMX20_00051 0.29 -1.1 50,582 + MPMX20_00051 0.30 -1.2 50,584 - MPMX20_00051 0.30 -2.7 50,608 - MPMX20_00051 0.32 -1.3 50,610 + MPMX20_00051 0.32 -1.2 50,611 - MPMX20_00051 0.32 -2.0 50,614 - MPMX20_00051 0.32 -1.2 50,616 + MPMX20_00051 0.33 -1.4 50,616 + MPMX20_00051 0.33 -1.1 50,618 - MPMX20_00051 0.33 -1.8 50,618 - MPMX20_00051 0.33 -1.6 50,622 + MPMX20_00051 0.33 -2.2 50,624 - MPMX20_00051 0.33 -0.8 50,624 - MPMX20_00051 0.33 -1.3 50,625 + MPMX20_00051 0.33 -0.1 50,628 - MPMX20_00051 0.33 -0.3 50,630 + MPMX20_00051 0.34 +0.9 50,630 - MPMX20_00051 0.34 +0.2 50,630 - MPMX20_00051 0.34 -0.0 50,631 - MPMX20_00051 0.34 -2.3 50,631 - MPMX20_00051 0.34 -2.6 50,631 - MPMX20_00051 0.34 -1.9 50,631 - MPMX20_00051 0.34 -1.3 50,631 - MPMX20_00051 0.34 -1.0 50,638 - MPMX20_00051 0.34 -0.6 50,642 - MPMX20_00051 0.34 -1.8 50,643 - MPMX20_00051 0.35 -2.3 50,648 - MPMX20_00051 0.35 -1.0 50,648 - MPMX20_00051 0.35 -1.5 50,650 - MPMX20_00051 0.35 -0.8 50,658 - MPMX20_00051 0.36 -0.1 50,668 + MPMX20_00051 0.36 -1.9 50,673 - MPMX20_00051 0.37 -3.3 50,673 - MPMX20_00051 0.37 -3.4 50,673 - MPMX20_00051 0.37 -0.1 50,674 + MPMX20_00051 0.37 -3.2 50,676 - MPMX20_00051 0.37 -0.3 50,679 + MPMX20_00051 0.37 -0.3 50,682 - MPMX20_00051 0.37 -1.5 50,682 - MPMX20_00051 0.37 -2.1 50,687 - MPMX20_00051 0.38 -1.1 50,687 - MPMX20_00051 0.38 -1.1 50,728 - MPMX20_00051 0.41 -0.8 50,728 - MPMX20_00051 0.41 -1.1 50,728 - MPMX20_00051 0.41 -2.0 50,754 + MPMX20_00051 0.43 -1.7 50,797 + MPMX20_00051 0.46 -1.5 50,802 + MPMX20_00051 0.46 -1.0 50,805 - MPMX20_00051 0.46 -0.0 50,805 - MPMX20_00051 0.46 -0.8 50,805 - MPMX20_00051 0.46 -1.0 50,823 + MPMX20_00051 0.48 -2.4 50,827 - MPMX20_00051 0.48 +0.5 50,828 - MPMX20_00051 0.48 +0.2 50,840 + MPMX20_00051 0.49 -2.0 50,847 + MPMX20_00051 0.49 +0.3 50,848 - MPMX20_00051 0.49 -1.5 50,871 - MPMX20_00051 0.51 -0.0 50,882 + MPMX20_00051 0.52 -0.6 50,882 + MPMX20_00051 0.52 +0.2 50,887 + MPMX20_00051 0.52 +0.8 50,889 + MPMX20_00051 0.52 -0.2 50,894 + MPMX20_00051 0.53 -0.8 50,899 + MPMX20_00051 0.53 -1.4 50,919 + MPMX20_00051 0.55 -0.1 50,922 - MPMX20_00051 0.55 -0.6 50,922 - MPMX20_00051 0.55 -1.3 50,922 - MPMX20_00051 0.55 -2.3 50,968 - MPMX20_00051 0.58 -2.1 50,968 - MPMX20_00051 0.58 -0.4 50,968 - MPMX20_00051 0.58 +0.2 50,968 - MPMX20_00051 0.58 -1.3 51,027 - MPMX20_00051 0.62 -1.0 51,028 - MPMX20_00051 0.62 -3.4 51,108 + MPMX20_00051 0.68 -0.3 51,203 - MPMX20_00051 0.75 -1.1 51,215 + MPMX20_00051 0.76 -2.5 51,217 + MPMX20_00051 0.76 -1.2 51,217 + MPMX20_00051 0.76 -0.2 51,219 + MPMX20_00051 0.76 -3.0 51,219 + MPMX20_00051 0.76 -2.0 51,219 + MPMX20_00051 0.76 -0.7 51,219 + MPMX20_00051 0.76 -1.5 51,219 + MPMX20_00051 0.76 -0.9 51,219 + MPMX20_00051 0.76 -1.5 51,225 - MPMX20_00051 0.77 +0.2 51,227 - MPMX20_00051 0.77 -1.3 51,227 - MPMX20_00051 0.77 -0.4 51,227 - MPMX20_00051 0.77 +0.7 51,227 - MPMX20_00051 0.77 -1.9 51,227 - MPMX20_00051 0.77 -1.3 51,238 + MPMX20_00051 0.78 -1.2 51,243 + MPMX20_00051 0.78 -1.8 51,251 - MPMX20_00051 0.79 -1.7 51,283 + MPMX20_00051 0.81 -1.8 51,302 + MPMX20_00051 0.82 -2.3 51,360 - MPMX20_00051 0.86 +0.2 51,398 + MPMX20_00051 0.89 -0.7 51,406 - MPMX20_00051 0.90 +1.3 51,406 - MPMX20_00051 0.90 +2.1 51,406 - MPMX20_00051 0.90 -1.1 51,412 - -0.6 51,417 - -1.5 51,417 - +2.1 51,464 - -2.6 51,465 + +0.1 51,473 - -3.3 51,475 + -0.3 51,488 + -0.9 51,496 - -0.6 51,578 - +0.5 51,606 - -2.4 51,669 + -1.2 51,672 - -0.6 51,756 - MPMX20_00052 0.14 -2.2 51,765 + MPMX20_00052 0.15 -0.9 51,765 + MPMX20_00052 0.15 +1.7 51,765 + MPMX20_00052 0.15 -1.9 51,783 + MPMX20_00052 0.16 +0.2 51,791 - MPMX20_00052 0.17 -0.2 51,859 - MPMX20_00052 0.22 -0.6 51,955 - MPMX20_00052 0.29 -0.7 51,962 - MPMX20_00052 0.30 -0.1 51,965 + MPMX20_00052 0.30 -0.5 52,046 + MPMX20_00052 0.36 +0.0 52,055 - MPMX20_00052 0.37 -1.2 52,118 + MPMX20_00052 0.42 -1.2 52,147 + MPMX20_00052 0.44 +0.7 52,195 - MPMX20_00052 0.48 -1.5 52,200 - MPMX20_00052 0.48 -0.6 52,301 - MPMX20_00052 0.56 +0.2 52,310 + MPMX20_00052 0.56 -1.5 52,313 + MPMX20_00052 0.56 -0.2 52,316 - MPMX20_00052 0.57 -3.4 52,341 + MPMX20_00052 0.59 -1.5 52,354 + MPMX20_00052 0.60 -0.3 52,407 - MPMX20_00052 0.63 -0.4 52,439 + MPMX20_00052 0.66 +0.2 52,447 - MPMX20_00052 0.67 -1.1 52,484 + MPMX20_00052 0.69 -1.5 52,573 - MPMX20_00052 0.76 -1.1 52,579 + MPMX20_00052 0.76 -1.4 52,579 + MPMX20_00052 0.76 -1.8 52,590 + MPMX20_00052 0.77 -1.6 52,592 - MPMX20_00052 0.77 -1.6 52,592 - MPMX20_00052 0.77 -2.3 52,598 - MPMX20_00052 0.78 -2.1 52,629 + MPMX20_00052 0.80 -2.0 52,633 - MPMX20_00052 0.81 -1.9 52,643 - MPMX20_00052 0.81 -1.8 52,661 + MPMX20_00052 0.83 +2.0 52,669 - MPMX20_00052 0.83 -2.3 52,699 + MPMX20_00052 0.86 -3.3 52,732 + MPMX20_00052 0.88 -0.9 52,751 - MPMX20_00052 0.89 -1.4 52,810 - -0.3 52,893 - -1.1 52,906 - -1.5 52,906 - -0.9 52,925 + +0.1 52,930 + +0.2 52,930 + -2.7 52,933 - -0.9 52,935 + MPMX20_00053 0.10 -2.5 52,935 + MPMX20_00053 0.10 -1.5 52,935 + MPMX20_00053 0.10 -2.9 52,936 - MPMX20_00053 0.11 -1.5 52,943 - MPMX20_00053 0.13 -0.3 52,943 - MPMX20_00053 0.13 +0.7 52,953 + MPMX20_00053 0.16 -0.1 52,953 + MPMX20_00053 0.16 -0.8 52,956 + MPMX20_00053 0.17 -2.3 52,963 + MPMX20_00053 0.19 -1.8 53,016 + MPMX20_00053 0.36 -0.4 53,016 + MPMX20_00053 0.36 -1.0 53,024 - MPMX20_00053 0.39 -0.8 53,024 - MPMX20_00053 0.39 +0.2 53,065 + MPMX20_00053 0.52 -1.3 53,065 + MPMX20_00053 0.52 -1.7 53,065 + MPMX20_00053 0.52 -1.1 53,065 + MPMX20_00053 0.52 -0.5 53,073 - MPMX20_00053 0.54 -0.6 53,102 + MPMX20_00053 0.63 -2.3 53,181 + MPMX20_00053 0.89 -1.0 53,199 - -2.0 53,310 - +1.4 53,311 - -0.6 53,449 + -0.4 53,457 - +0.3 53,480 + +0.4 53,548 + +2.1 53,548 + +0.3 53,548 + +1.6 53,569 + +0.7 53,589 + +0.1 53,597 - +0.3 53,597 - +1.6 53,602 - -0.2 53,605 + MPMX20_00054 0.10 +1.2 53,665 + MPMX20_00054 0.16 -0.3 53,669 + MPMX20_00054 0.17 +0.5 53,669 + MPMX20_00054 0.17 -0.6 53,669 + MPMX20_00054 0.17 +0.1 53,691 + MPMX20_00054 0.19 +0.7 53,696 + MPMX20_00054 0.20 +0.7 53,696 + MPMX20_00054 0.20 +0.8 53,726 - MPMX20_00054 0.23 +0.2 53,768 - MPMX20_00054 0.27 +0.1 53,869 - MPMX20_00054 0.38 +2.9
Or see this region's nucleotide sequence