Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01308

Experiment: Fumarate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01307 and MPMX20_01308 are separated by 5 nucleotidesMPMX20_01308 and MPMX20_01309 are separated by 89 nucleotidesMPMX20_01309 and MPMX20_01310 overlap by 4 nucleotides MPMX20_01307: MPMX20_01307 - Apolipoprotein N-acyltransferase, at 1,368,148 to 1,369,686 _01307 MPMX20_01308: MPMX20_01308 - Magnesium and cobalt efflux protein CorC, at 1,369,692 to 1,370,570 _01308 MPMX20_01309: MPMX20_01309 - Endoribonuclease YbeY, at 1,370,660 to 1,371,127 _01309 MPMX20_01310: MPMX20_01310 - PhoH-like protein, at 1,371,124 to 1,372,170 _01310 Position (kb) 1369 1370 1371Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1369.698 kb on - strandat 1369.789 kb on + strand, within MPMX20_01308at 1369.804 kb on + strand, within MPMX20_01308at 1369.920 kb on - strand, within MPMX20_01308at 1369.932 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.933 kb on + strand, within MPMX20_01308at 1369.939 kb on - strand, within MPMX20_01308at 1369.941 kb on - strand, within MPMX20_01308at 1369.941 kb on - strand, within MPMX20_01308at 1369.960 kb on - strand, within MPMX20_01308at 1370.120 kb on + strand, within MPMX20_01308at 1370.140 kb on + strand, within MPMX20_01308at 1370.169 kb on + strand, within MPMX20_01308at 1370.311 kb on - strand, within MPMX20_01308at 1370.321 kb on + strand, within MPMX20_01308at 1370.392 kb on - strand, within MPMX20_01308at 1370.400 kb on - strand, within MPMX20_01308at 1370.540 kb on + strandat 1370.577 kb on + strandat 1370.605 kb on - strandat 1370.627 kb on - strandat 1371.139 kb on + strandat 1371.139 kb on + strandat 1371.147 kb on - strandat 1371.176 kb on + strandat 1371.192 kb on - strandat 1371.217 kb on - strandat 1371.252 kb on + strand, within MPMX20_01310at 1371.252 kb on + strand, within MPMX20_01310at 1371.278 kb on - strand, within MPMX20_01310at 1371.311 kb on - strand, within MPMX20_01310at 1371.345 kb on + strand, within MPMX20_01310at 1371.479 kb on - strand, within MPMX20_01310at 1371.479 kb on - strand, within MPMX20_01310at 1371.564 kb on - strand, within MPMX20_01310

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Per-strain Table

Position Strand Gene LocusTag Fraction Fumarate (C)
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1,369,698 - +1.9
1,369,789 + MPMX20_01308 0.11 -1.3
1,369,804 + MPMX20_01308 0.13 -2.0
1,369,920 - MPMX20_01308 0.26 -0.1
1,369,932 + MPMX20_01308 0.27 -1.1
1,369,933 + MPMX20_01308 0.27 -1.3
1,369,933 + MPMX20_01308 0.27 -2.6
1,369,933 + MPMX20_01308 0.27 -1.5
1,369,933 + MPMX20_01308 0.27 -0.5
1,369,933 + MPMX20_01308 0.27 -3.4
1,369,933 + MPMX20_01308 0.27 -1.0
1,369,933 + MPMX20_01308 0.27 -0.6
1,369,933 + MPMX20_01308 0.27 -2.2
1,369,939 - MPMX20_01308 0.28 -3.1
1,369,941 - MPMX20_01308 0.28 -1.1
1,369,941 - MPMX20_01308 0.28 -2.0
1,369,960 - MPMX20_01308 0.30 -1.4
1,370,120 + MPMX20_01308 0.49 -0.0
1,370,140 + MPMX20_01308 0.51 +0.9
1,370,169 + MPMX20_01308 0.54 -0.3
1,370,311 - MPMX20_01308 0.70 -1.7
1,370,321 + MPMX20_01308 0.72 -2.0
1,370,392 - MPMX20_01308 0.80 -0.2
1,370,400 - MPMX20_01308 0.81 -1.3
1,370,540 + -0.2
1,370,577 + -1.6
1,370,605 - +0.2
1,370,627 - +0.6
1,371,139 + -0.3
1,371,139 + -1.7
1,371,147 - +1.5
1,371,176 + -0.8
1,371,192 - +0.0
1,371,217 - +0.1
1,371,252 + MPMX20_01310 0.12 +0.3
1,371,252 + MPMX20_01310 0.12 -1.7
1,371,278 - MPMX20_01310 0.15 +1.0
1,371,311 - MPMX20_01310 0.18 -0.1
1,371,345 + MPMX20_01310 0.21 -0.6
1,371,479 - MPMX20_01310 0.34 +0.9
1,371,479 - MPMX20_01310 0.34 -0.3
1,371,564 - MPMX20_01310 0.42 +1.5

Or see this region's nucleotide sequence