Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00270

Experiment: Fumarate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00269 and MPMX20_00270 are separated by 22 nucleotidesMPMX20_00270 and MPMX20_00271 overlap by 4 nucleotides MPMX20_00269: MPMX20_00269 - Alanine racemase, biosynthetic, at 286,746 to 287,825 _00269 MPMX20_00270: MPMX20_00270 - Nicotinamide riboside transporter PnuC, at 287,848 to 288,405 _00270 MPMX20_00271: MPMX20_00271 - Trifunctional NAD biosynthesis/regulator protein NadR, at 288,402 to 289,412 _00271 Position (kb) 287 288 289Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 286.867 kb on + strand, within MPMX20_00269at 286.867 kb on + strand, within MPMX20_00269at 286.871 kb on + strand, within MPMX20_00269at 286.875 kb on - strand, within MPMX20_00269at 286.875 kb on - strand, within MPMX20_00269at 286.875 kb on - strand, within MPMX20_00269at 286.921 kb on + strand, within MPMX20_00269at 287.033 kb on - strand, within MPMX20_00269at 287.047 kb on + strand, within MPMX20_00269at 287.060 kb on - strand, within MPMX20_00269at 287.074 kb on + strand, within MPMX20_00269at 287.119 kb on - strand, within MPMX20_00269at 287.129 kb on - strand, within MPMX20_00269at 287.137 kb on - strand, within MPMX20_00269at 287.173 kb on + strand, within MPMX20_00269at 287.181 kb on - strand, within MPMX20_00269at 287.181 kb on - strand, within MPMX20_00269at 287.230 kb on + strand, within MPMX20_00269at 287.248 kb on - strand, within MPMX20_00269at 287.249 kb on - strand, within MPMX20_00269at 287.299 kb on + strand, within MPMX20_00269at 287.302 kb on - strand, within MPMX20_00269at 287.307 kb on - strand, within MPMX20_00269at 287.314 kb on + strand, within MPMX20_00269at 287.322 kb on - strand, within MPMX20_00269at 287.355 kb on + strand, within MPMX20_00269at 287.355 kb on + strand, within MPMX20_00269at 287.357 kb on + strand, within MPMX20_00269at 287.363 kb on - strand, within MPMX20_00269at 287.363 kb on - strand, within MPMX20_00269at 287.422 kb on - strand, within MPMX20_00269at 287.544 kb on - strand, within MPMX20_00269at 287.610 kb on - strand, within MPMX20_00269at 287.612 kb on + strand, within MPMX20_00269at 287.620 kb on - strand, within MPMX20_00269at 287.663 kb on - strand, within MPMX20_00269at 287.690 kb on + strand, within MPMX20_00269at 287.698 kb on - strand, within MPMX20_00269at 287.698 kb on - strand, within MPMX20_00269at 287.714 kb on + strand, within MPMX20_00269at 287.726 kb on + strandat 287.923 kb on - strand, within MPMX20_00270at 287.948 kb on - strand, within MPMX20_00270at 287.982 kb on + strand, within MPMX20_00270at 287.990 kb on - strand, within MPMX20_00270at 287.990 kb on - strand, within MPMX20_00270at 287.990 kb on - strand, within MPMX20_00270at 288.048 kb on + strand, within MPMX20_00270at 288.048 kb on + strand, within MPMX20_00270at 288.069 kb on + strand, within MPMX20_00270at 288.070 kb on + strand, within MPMX20_00270at 288.077 kb on - strand, within MPMX20_00270at 288.156 kb on - strand, within MPMX20_00270at 288.174 kb on + strand, within MPMX20_00270at 288.182 kb on - strand, within MPMX20_00270at 288.182 kb on - strand, within MPMX20_00270at 288.236 kb on - strand, within MPMX20_00270at 288.242 kb on + strand, within MPMX20_00270at 288.264 kb on + strand, within MPMX20_00270at 288.331 kb on + strand, within MPMX20_00270at 288.332 kb on + strand, within MPMX20_00270at 288.340 kb on - strand, within MPMX20_00270at 288.340 kb on - strand, within MPMX20_00270at 288.368 kb on + strandat 288.368 kb on + strandat 288.368 kb on + strandat 288.368 kb on + strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.408 kb on - strandat 288.410 kb on - strandat 288.415 kb on - strandat 288.429 kb on - strandat 288.452 kb on - strandat 288.454 kb on - strandat 288.470 kb on + strandat 288.470 kb on + strandat 288.470 kb on + strandat 288.475 kb on + strandat 288.478 kb on - strandat 288.478 kb on - strandat 288.478 kb on - strandat 288.493 kb on - strandat 288.508 kb on - strand, within MPMX20_00271at 288.555 kb on + strand, within MPMX20_00271at 288.565 kb on + strand, within MPMX20_00271at 288.573 kb on - strand, within MPMX20_00271at 288.589 kb on + strand, within MPMX20_00271at 288.597 kb on - strand, within MPMX20_00271at 288.597 kb on - strand, within MPMX20_00271at 288.607 kb on + strand, within MPMX20_00271at 288.607 kb on + strand, within MPMX20_00271at 288.615 kb on - strand, within MPMX20_00271at 288.615 kb on - strand, within MPMX20_00271at 288.685 kb on + strand, within MPMX20_00271at 288.685 kb on + strand, within MPMX20_00271at 288.693 kb on - strand, within MPMX20_00271at 288.693 kb on - strand, within MPMX20_00271at 288.713 kb on + strand, within MPMX20_00271at 288.752 kb on - strand, within MPMX20_00271at 288.841 kb on + strand, within MPMX20_00271at 288.855 kb on - strand, within MPMX20_00271at 288.897 kb on - strand, within MPMX20_00271at 288.904 kb on - strand, within MPMX20_00271at 289.029 kb on + strand, within MPMX20_00271at 289.049 kb on - strand, within MPMX20_00271at 289.059 kb on + strand, within MPMX20_00271at 289.095 kb on + strand, within MPMX20_00271at 289.108 kb on - strand, within MPMX20_00271at 289.114 kb on + strand, within MPMX20_00271at 289.131 kb on + strand, within MPMX20_00271at 289.137 kb on + strand, within MPMX20_00271at 289.137 kb on + strand, within MPMX20_00271at 289.197 kb on + strand, within MPMX20_00271at 289.259 kb on + strand, within MPMX20_00271at 289.259 kb on + strand, within MPMX20_00271at 289.269 kb on + strand, within MPMX20_00271at 289.271 kb on + strand, within MPMX20_00271at 289.305 kb on + strand, within MPMX20_00271at 289.313 kb on - strandat 289.313 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Fumarate (C)
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286,867 + MPMX20_00269 0.11 +0.1
286,867 + MPMX20_00269 0.11 -0.5
286,871 + MPMX20_00269 0.12 +1.0
286,875 - MPMX20_00269 0.12 +0.5
286,875 - MPMX20_00269 0.12 +0.8
286,875 - MPMX20_00269 0.12 -0.1
286,921 + MPMX20_00269 0.16 -1.5
287,033 - MPMX20_00269 0.27 -1.6
287,047 + MPMX20_00269 0.28 +0.3
287,060 - MPMX20_00269 0.29 -0.3
287,074 + MPMX20_00269 0.30 +0.6
287,119 - MPMX20_00269 0.35 -0.4
287,129 - MPMX20_00269 0.35 +0.5
287,137 - MPMX20_00269 0.36 -0.8
287,173 + MPMX20_00269 0.40 -0.5
287,181 - MPMX20_00269 0.40 -1.3
287,181 - MPMX20_00269 0.40 +0.5
287,230 + MPMX20_00269 0.45 +0.5
287,248 - MPMX20_00269 0.46 -0.3
287,249 - MPMX20_00269 0.47 -1.6
287,299 + MPMX20_00269 0.51 -0.0
287,302 - MPMX20_00269 0.51 +0.8
287,307 - MPMX20_00269 0.52 -0.1
287,314 + MPMX20_00269 0.53 +0.2
287,322 - MPMX20_00269 0.53 -1.6
287,355 + MPMX20_00269 0.56 +0.7
287,355 + MPMX20_00269 0.56 +0.7
287,357 + MPMX20_00269 0.57 -0.6
287,363 - MPMX20_00269 0.57 -0.6
287,363 - MPMX20_00269 0.57 +0.3
287,422 - MPMX20_00269 0.63 -0.5
287,544 - MPMX20_00269 0.74 +2.9
287,610 - MPMX20_00269 0.80 -0.5
287,612 + MPMX20_00269 0.80 +0.2
287,620 - MPMX20_00269 0.81 +0.2
287,663 - MPMX20_00269 0.85 -0.4
287,690 + MPMX20_00269 0.87 +0.4
287,698 - MPMX20_00269 0.88 -0.5
287,698 - MPMX20_00269 0.88 +0.6
287,714 + MPMX20_00269 0.90 -0.1
287,726 + -0.5
287,923 - MPMX20_00270 0.13 +0.8
287,948 - MPMX20_00270 0.18 -0.5
287,982 + MPMX20_00270 0.24 +0.1
287,990 - MPMX20_00270 0.25 -0.4
287,990 - MPMX20_00270 0.25 -0.0
287,990 - MPMX20_00270 0.25 -0.2
288,048 + MPMX20_00270 0.36 +0.6
288,048 + MPMX20_00270 0.36 -0.1
288,069 + MPMX20_00270 0.40 +0.2
288,070 + MPMX20_00270 0.40 -1.6
288,077 - MPMX20_00270 0.41 +0.1
288,156 - MPMX20_00270 0.55 +0.2
288,174 + MPMX20_00270 0.58 -1.5
288,182 - MPMX20_00270 0.60 +0.5
288,182 - MPMX20_00270 0.60 +0.0
288,236 - MPMX20_00270 0.70 -0.1
288,242 + MPMX20_00270 0.71 +1.1
288,264 + MPMX20_00270 0.75 -1.2
288,331 + MPMX20_00270 0.87 -0.9
288,332 + MPMX20_00270 0.87 +1.4
288,340 - MPMX20_00270 0.88 -0.7
288,340 - MPMX20_00270 0.88 +0.9
288,368 + +0.4
288,368 + -0.5
288,368 + -0.5
288,368 + -0.1
288,376 - -1.0
288,376 - +0.3
288,376 - +2.3
288,376 - +1.6
288,376 - +1.0
288,408 - -0.3
288,410 - -1.2
288,415 - +0.3
288,429 - +0.3
288,452 - +2.0
288,454 - -0.9
288,470 + -0.3
288,470 + -0.2
288,470 + +1.4
288,475 + -0.5
288,478 - -0.3
288,478 - +0.1
288,478 - +0.1
288,493 - +0.8
288,508 - MPMX20_00271 0.10 +0.5
288,555 + MPMX20_00271 0.15 +0.5
288,565 + MPMX20_00271 0.16 +1.5
288,573 - MPMX20_00271 0.17 +0.3
288,589 + MPMX20_00271 0.18 -0.7
288,597 - MPMX20_00271 0.19 +1.2
288,597 - MPMX20_00271 0.19 -0.1
288,607 + MPMX20_00271 0.20 +0.6
288,607 + MPMX20_00271 0.20 +0.2
288,615 - MPMX20_00271 0.21 +0.5
288,615 - MPMX20_00271 0.21 -2.9
288,685 + MPMX20_00271 0.28 +0.1
288,685 + MPMX20_00271 0.28 +0.4
288,693 - MPMX20_00271 0.29 +0.7
288,693 - MPMX20_00271 0.29 +0.2
288,713 + MPMX20_00271 0.31 -0.1
288,752 - MPMX20_00271 0.35 +1.5
288,841 + MPMX20_00271 0.43 -0.5
288,855 - MPMX20_00271 0.45 -0.1
288,897 - MPMX20_00271 0.49 -0.2
288,904 - MPMX20_00271 0.50 +0.9
289,029 + MPMX20_00271 0.62 +0.0
289,049 - MPMX20_00271 0.64 -1.3
289,059 + MPMX20_00271 0.65 -0.2
289,095 + MPMX20_00271 0.69 +0.2
289,108 - MPMX20_00271 0.70 -0.2
289,114 + MPMX20_00271 0.70 +0.0
289,131 + MPMX20_00271 0.72 -2.7
289,137 + MPMX20_00271 0.73 +1.0
289,137 + MPMX20_00271 0.73 -0.4
289,197 + MPMX20_00271 0.79 +0.4
289,259 + MPMX20_00271 0.85 -0.1
289,259 + MPMX20_00271 0.85 +0.6
289,269 + MPMX20_00271 0.86 +0.1
289,271 + MPMX20_00271 0.86 -1.4
289,305 + MPMX20_00271 0.89 +0.8
289,313 - +0.4
289,313 - -0.7

Or see this region's nucleotide sequence