Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03691 and MPMX20_03692 are separated by 213 nucleotides MPMX20_03692 and MPMX20_03693 are separated by 12 nucleotides
MPMX20_03691: MPMX20_03691 - Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase, at 3,889,495 to 3,890,370
_03691
MPMX20_03692: MPMX20_03692 - Phosphoenolpyruvate-dependent phosphotransferase system, at 3,890,584 to 3,892,830
_03692
MPMX20_03693: MPMX20_03693 - RNA pyrophosphohydrolase, at 3,892,843 to 3,893,307
_03693
Position (kb)
3890
3891
3892
3893 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3890.508 kb on + strand at 3890.508 kb on + strand at 3890.508 kb on + strand at 3890.510 kb on + strand at 3890.511 kb on - strand at 3890.511 kb on - strand at 3890.522 kb on + strand at 3890.530 kb on - strand at 3890.530 kb on - strand at 3890.559 kb on + strand at 3890.594 kb on + strand at 3890.594 kb on + strand at 3890.678 kb on - strand at 3890.678 kb on - strand at 3890.740 kb on + strand at 3890.774 kb on - strand at 3890.803 kb on + strand at 3890.833 kb on - strand, within MPMX20_03692 at 3890.861 kb on - strand, within MPMX20_03692 at 3890.916 kb on - strand, within MPMX20_03692 at 3890.952 kb on + strand, within MPMX20_03692 at 3890.975 kb on - strand, within MPMX20_03692 at 3891.007 kb on - strand, within MPMX20_03692 at 3891.027 kb on - strand, within MPMX20_03692 at 3891.252 kb on + strand, within MPMX20_03692 at 3891.266 kb on - strand, within MPMX20_03692 at 3891.266 kb on - strand, within MPMX20_03692 at 3891.327 kb on + strand, within MPMX20_03692 at 3891.327 kb on + strand, within MPMX20_03692 at 3891.335 kb on - strand, within MPMX20_03692 at 3891.335 kb on - strand, within MPMX20_03692 at 3891.377 kb on + strand, within MPMX20_03692 at 3891.377 kb on + strand, within MPMX20_03692 at 3891.385 kb on - strand, within MPMX20_03692 at 3891.435 kb on + strand, within MPMX20_03692 at 3891.448 kb on + strand, within MPMX20_03692 at 3891.448 kb on + strand, within MPMX20_03692 at 3891.456 kb on - strand, within MPMX20_03692 at 3891.461 kb on - strand, within MPMX20_03692 at 3891.494 kb on - strand, within MPMX20_03692 at 3891.499 kb on + strand, within MPMX20_03692 at 3891.499 kb on + strand, within MPMX20_03692 at 3891.521 kb on + strand, within MPMX20_03692 at 3891.558 kb on + strand, within MPMX20_03692 at 3891.558 kb on + strand, within MPMX20_03692 at 3891.558 kb on + strand, within MPMX20_03692 at 3891.566 kb on - strand, within MPMX20_03692 at 3891.566 kb on - strand, within MPMX20_03692 at 3891.569 kb on + strand, within MPMX20_03692 at 3891.583 kb on + strand, within MPMX20_03692 at 3891.620 kb on + strand, within MPMX20_03692 at 3891.647 kb on + strand, within MPMX20_03692 at 3891.683 kb on - strand, within MPMX20_03692 at 3891.686 kb on + strand, within MPMX20_03692 at 3891.691 kb on + strand, within MPMX20_03692 at 3891.691 kb on + strand, within MPMX20_03692 at 3891.691 kb on + strand, within MPMX20_03692 at 3891.696 kb on + strand, within MPMX20_03692 at 3891.841 kb on + strand, within MPMX20_03692 at 3891.849 kb on - strand, within MPMX20_03692 at 3891.924 kb on + strand, within MPMX20_03692 at 3891.924 kb on + strand, within MPMX20_03692 at 3891.924 kb on + strand, within MPMX20_03692 at 3891.924 kb on + strand, within MPMX20_03692 at 3891.978 kb on - strand, within MPMX20_03692 at 3892.024 kb on + strand, within MPMX20_03692 at 3892.074 kb on - strand, within MPMX20_03692 at 3892.082 kb on + strand, within MPMX20_03692 at 3892.082 kb on + strand, within MPMX20_03692 at 3892.212 kb on + strand, within MPMX20_03692 at 3892.224 kb on + strand, within MPMX20_03692 at 3892.233 kb on - strand, within MPMX20_03692 at 3892.255 kb on + strand, within MPMX20_03692 at 3892.270 kb on + strand, within MPMX20_03692 at 3892.278 kb on - strand, within MPMX20_03692 at 3892.303 kb on + strand, within MPMX20_03692 at 3892.347 kb on - strand, within MPMX20_03692 at 3892.411 kb on - strand, within MPMX20_03692 at 3892.529 kb on - strand, within MPMX20_03692 at 3892.539 kb on + strand, within MPMX20_03692 at 3892.581 kb on - strand, within MPMX20_03692 at 3892.581 kb on - strand, within MPMX20_03692 at 3892.610 kb on - strand at 3892.677 kb on + strand at 3892.762 kb on + strand at 3892.790 kb on + strand at 3892.839 kb on - strand at 3892.849 kb on - strand at 3892.895 kb on + strand, within MPMX20_03693 at 3892.947 kb on - strand, within MPMX20_03693 at 3892.995 kb on + strand, within MPMX20_03693 at 3893.214 kb on + strand, within MPMX20_03693 at 3893.386 kb on + strand at 3893.386 kb on + strand at 3893.386 kb on + strand at 3893.421 kb on + strand at 3893.425 kb on - strand at 3893.425 kb on - strand at 3893.429 kb on - strand at 3893.475 kb on - strand at 3893.514 kb on + strand at 3893.802 kb on + strand at 3893.802 kb on + strand at 3893.802 kb on + strand at 3893.810 kb on - strand at 3893.810 kb on - strand at 3893.810 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 3,890,508 + -0.1 3,890,508 + +0.8 3,890,508 + -0.7 3,890,510 + -0.0 3,890,511 - +1.4 3,890,511 - +0.5 3,890,522 + -0.3 3,890,530 - +0.8 3,890,530 - +1.0 3,890,559 + +1.2 3,890,594 + -0.3 3,890,594 + -0.6 3,890,678 - +2.2 3,890,678 - -0.7 3,890,740 + -2.5 3,890,774 - -0.5 3,890,803 + +0.9 3,890,833 - MPMX20_03692 0.11 +1.0 3,890,861 - MPMX20_03692 0.12 +1.5 3,890,916 - MPMX20_03692 0.15 +1.6 3,890,952 + MPMX20_03692 0.16 +0.2 3,890,975 - MPMX20_03692 0.17 +1.4 3,891,007 - MPMX20_03692 0.19 +1.3 3,891,027 - MPMX20_03692 0.20 +1.6 3,891,252 + MPMX20_03692 0.30 +0.0 3,891,266 - MPMX20_03692 0.30 +0.3 3,891,266 - MPMX20_03692 0.30 +1.4 3,891,327 + MPMX20_03692 0.33 +0.7 3,891,327 + MPMX20_03692 0.33 +1.6 3,891,335 - MPMX20_03692 0.33 +0.8 3,891,335 - MPMX20_03692 0.33 +1.3 3,891,377 + MPMX20_03692 0.35 +1.5 3,891,377 + MPMX20_03692 0.35 +1.0 3,891,385 - MPMX20_03692 0.36 +1.9 3,891,435 + MPMX20_03692 0.38 +1.7 3,891,448 + MPMX20_03692 0.38 +2.7 3,891,448 + MPMX20_03692 0.38 +1.3 3,891,456 - MPMX20_03692 0.39 +1.1 3,891,461 - MPMX20_03692 0.39 +1.4 3,891,494 - MPMX20_03692 0.40 +1.4 3,891,499 + MPMX20_03692 0.41 +1.8 3,891,499 + MPMX20_03692 0.41 +0.3 3,891,521 + MPMX20_03692 0.42 -0.1 3,891,558 + MPMX20_03692 0.43 +1.1 3,891,558 + MPMX20_03692 0.43 +0.9 3,891,558 + MPMX20_03692 0.43 +0.6 3,891,566 - MPMX20_03692 0.44 +1.8 3,891,566 - MPMX20_03692 0.44 +1.7 3,891,569 + MPMX20_03692 0.44 +4.0 3,891,583 + MPMX20_03692 0.44 +1.3 3,891,620 + MPMX20_03692 0.46 +1.4 3,891,647 + MPMX20_03692 0.47 -1.7 3,891,683 - MPMX20_03692 0.49 -0.2 3,891,686 + MPMX20_03692 0.49 +1.6 3,891,691 + MPMX20_03692 0.49 +1.9 3,891,691 + MPMX20_03692 0.49 +0.6 3,891,691 + MPMX20_03692 0.49 +1.7 3,891,696 + MPMX20_03692 0.49 +1.7 3,891,841 + MPMX20_03692 0.56 +2.0 3,891,849 - MPMX20_03692 0.56 +2.3 3,891,924 + MPMX20_03692 0.60 +1.5 3,891,924 + MPMX20_03692 0.60 +1.9 3,891,924 + MPMX20_03692 0.60 -0.0 3,891,924 + MPMX20_03692 0.60 +0.4 3,891,978 - MPMX20_03692 0.62 +1.2 3,892,024 + MPMX20_03692 0.64 +1.0 3,892,074 - MPMX20_03692 0.66 +1.2 3,892,082 + MPMX20_03692 0.67 +0.6 3,892,082 + MPMX20_03692 0.67 +0.4 3,892,212 + MPMX20_03692 0.72 +1.1 3,892,224 + MPMX20_03692 0.73 +2.0 3,892,233 - MPMX20_03692 0.73 +0.6 3,892,255 + MPMX20_03692 0.74 +1.7 3,892,270 + MPMX20_03692 0.75 -0.2 3,892,278 - MPMX20_03692 0.75 +1.0 3,892,303 + MPMX20_03692 0.77 +0.7 3,892,347 - MPMX20_03692 0.78 -1.0 3,892,411 - MPMX20_03692 0.81 +1.5 3,892,529 - MPMX20_03692 0.87 +1.6 3,892,539 + MPMX20_03692 0.87 +1.9 3,892,581 - MPMX20_03692 0.89 +0.1 3,892,581 - MPMX20_03692 0.89 +1.5 3,892,610 - +1.7 3,892,677 + +0.8 3,892,762 + +1.2 3,892,790 + +1.1 3,892,839 - -1.5 3,892,849 - +0.1 3,892,895 + MPMX20_03693 0.11 -0.9 3,892,947 - MPMX20_03693 0.22 -1.8 3,892,995 + MPMX20_03693 0.33 -0.5 3,893,214 + MPMX20_03693 0.80 -1.5 3,893,386 + -0.8 3,893,386 + -1.2 3,893,386 + -0.8 3,893,421 + -1.2 3,893,425 - -0.5 3,893,425 - +0.4 3,893,429 - +1.0 3,893,475 - +0.3 3,893,514 + +0.8 3,893,802 + -3.3 3,893,802 + +0.1 3,893,802 + -0.2 3,893,810 - -2.7 3,893,810 - -0.7 3,893,810 - +0.1
Or see this region's nucleotide sequence