Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03692

Experiment: acetate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03691 and MPMX20_03692 are separated by 213 nucleotidesMPMX20_03692 and MPMX20_03693 are separated by 12 nucleotides MPMX20_03691: MPMX20_03691 - Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase, at 3,889,495 to 3,890,370 _03691 MPMX20_03692: MPMX20_03692 - Phosphoenolpyruvate-dependent phosphotransferase system, at 3,890,584 to 3,892,830 _03692 MPMX20_03693: MPMX20_03693 - RNA pyrophosphohydrolase, at 3,892,843 to 3,893,307 _03693 Position (kb) 3890 3891 3892 3893Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 3890.508 kb on + strandat 3890.508 kb on + strandat 3890.508 kb on + strandat 3890.510 kb on + strandat 3890.511 kb on - strandat 3890.511 kb on - strandat 3890.522 kb on + strandat 3890.530 kb on - strandat 3890.530 kb on - strandat 3890.559 kb on + strandat 3890.594 kb on + strandat 3890.594 kb on + strandat 3890.678 kb on - strandat 3890.678 kb on - strandat 3890.740 kb on + strandat 3890.774 kb on - strandat 3890.803 kb on + strandat 3890.833 kb on - strand, within MPMX20_03692at 3890.861 kb on - strand, within MPMX20_03692at 3890.916 kb on - strand, within MPMX20_03692at 3890.952 kb on + strand, within MPMX20_03692at 3890.975 kb on - strand, within MPMX20_03692at 3891.007 kb on - strand, within MPMX20_03692at 3891.027 kb on - strand, within MPMX20_03692at 3891.252 kb on + strand, within MPMX20_03692at 3891.266 kb on - strand, within MPMX20_03692at 3891.266 kb on - strand, within MPMX20_03692at 3891.327 kb on + strand, within MPMX20_03692at 3891.327 kb on + strand, within MPMX20_03692at 3891.335 kb on - strand, within MPMX20_03692at 3891.335 kb on - strand, within MPMX20_03692at 3891.377 kb on + strand, within MPMX20_03692at 3891.377 kb on + strand, within MPMX20_03692at 3891.385 kb on - strand, within MPMX20_03692at 3891.435 kb on + strand, within MPMX20_03692at 3891.448 kb on + strand, within MPMX20_03692at 3891.448 kb on + strand, within MPMX20_03692at 3891.456 kb on - strand, within MPMX20_03692at 3891.461 kb on - strand, within MPMX20_03692at 3891.494 kb on - strand, within MPMX20_03692at 3891.499 kb on + strand, within MPMX20_03692at 3891.499 kb on + strand, within MPMX20_03692at 3891.521 kb on + strand, within MPMX20_03692at 3891.558 kb on + strand, within MPMX20_03692at 3891.558 kb on + strand, within MPMX20_03692at 3891.558 kb on + strand, within MPMX20_03692at 3891.566 kb on - strand, within MPMX20_03692at 3891.566 kb on - strand, within MPMX20_03692at 3891.569 kb on + strand, within MPMX20_03692at 3891.583 kb on + strand, within MPMX20_03692at 3891.620 kb on + strand, within MPMX20_03692at 3891.647 kb on + strand, within MPMX20_03692at 3891.683 kb on - strand, within MPMX20_03692at 3891.686 kb on + strand, within MPMX20_03692at 3891.691 kb on + strand, within MPMX20_03692at 3891.691 kb on + strand, within MPMX20_03692at 3891.691 kb on + strand, within MPMX20_03692at 3891.696 kb on + strand, within MPMX20_03692at 3891.841 kb on + strand, within MPMX20_03692at 3891.849 kb on - strand, within MPMX20_03692at 3891.924 kb on + strand, within MPMX20_03692at 3891.924 kb on + strand, within MPMX20_03692at 3891.924 kb on + strand, within MPMX20_03692at 3891.924 kb on + strand, within MPMX20_03692at 3891.978 kb on - strand, within MPMX20_03692at 3892.024 kb on + strand, within MPMX20_03692at 3892.074 kb on - strand, within MPMX20_03692at 3892.082 kb on + strand, within MPMX20_03692at 3892.082 kb on + strand, within MPMX20_03692at 3892.212 kb on + strand, within MPMX20_03692at 3892.224 kb on + strand, within MPMX20_03692at 3892.233 kb on - strand, within MPMX20_03692at 3892.255 kb on + strand, within MPMX20_03692at 3892.270 kb on + strand, within MPMX20_03692at 3892.278 kb on - strand, within MPMX20_03692at 3892.303 kb on + strand, within MPMX20_03692at 3892.347 kb on - strand, within MPMX20_03692at 3892.411 kb on - strand, within MPMX20_03692at 3892.529 kb on - strand, within MPMX20_03692at 3892.539 kb on + strand, within MPMX20_03692at 3892.581 kb on - strand, within MPMX20_03692at 3892.581 kb on - strand, within MPMX20_03692at 3892.610 kb on - strandat 3892.677 kb on + strandat 3892.762 kb on + strandat 3892.790 kb on + strandat 3892.839 kb on - strandat 3892.849 kb on - strandat 3892.895 kb on + strand, within MPMX20_03693at 3892.947 kb on - strand, within MPMX20_03693at 3892.995 kb on + strand, within MPMX20_03693at 3893.214 kb on + strand, within MPMX20_03693at 3893.386 kb on + strandat 3893.386 kb on + strandat 3893.386 kb on + strandat 3893.421 kb on + strandat 3893.425 kb on - strandat 3893.425 kb on - strandat 3893.429 kb on - strandat 3893.475 kb on - strandat 3893.514 kb on + strandat 3893.802 kb on + strandat 3893.802 kb on + strandat 3893.802 kb on + strandat 3893.810 kb on - strandat 3893.810 kb on - strandat 3893.810 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction acetate (C)
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3,890,508 + -0.1
3,890,508 + +0.8
3,890,508 + -0.7
3,890,510 + -0.0
3,890,511 - +1.4
3,890,511 - +0.5
3,890,522 + -0.3
3,890,530 - +0.8
3,890,530 - +1.0
3,890,559 + +1.2
3,890,594 + -0.3
3,890,594 + -0.6
3,890,678 - +2.2
3,890,678 - -0.7
3,890,740 + -2.5
3,890,774 - -0.5
3,890,803 + +0.9
3,890,833 - MPMX20_03692 0.11 +1.0
3,890,861 - MPMX20_03692 0.12 +1.5
3,890,916 - MPMX20_03692 0.15 +1.6
3,890,952 + MPMX20_03692 0.16 +0.2
3,890,975 - MPMX20_03692 0.17 +1.4
3,891,007 - MPMX20_03692 0.19 +1.3
3,891,027 - MPMX20_03692 0.20 +1.6
3,891,252 + MPMX20_03692 0.30 +0.0
3,891,266 - MPMX20_03692 0.30 +0.3
3,891,266 - MPMX20_03692 0.30 +1.4
3,891,327 + MPMX20_03692 0.33 +0.7
3,891,327 + MPMX20_03692 0.33 +1.6
3,891,335 - MPMX20_03692 0.33 +0.8
3,891,335 - MPMX20_03692 0.33 +1.3
3,891,377 + MPMX20_03692 0.35 +1.5
3,891,377 + MPMX20_03692 0.35 +1.0
3,891,385 - MPMX20_03692 0.36 +1.9
3,891,435 + MPMX20_03692 0.38 +1.7
3,891,448 + MPMX20_03692 0.38 +2.7
3,891,448 + MPMX20_03692 0.38 +1.3
3,891,456 - MPMX20_03692 0.39 +1.1
3,891,461 - MPMX20_03692 0.39 +1.4
3,891,494 - MPMX20_03692 0.40 +1.4
3,891,499 + MPMX20_03692 0.41 +1.8
3,891,499 + MPMX20_03692 0.41 +0.3
3,891,521 + MPMX20_03692 0.42 -0.1
3,891,558 + MPMX20_03692 0.43 +1.1
3,891,558 + MPMX20_03692 0.43 +0.9
3,891,558 + MPMX20_03692 0.43 +0.6
3,891,566 - MPMX20_03692 0.44 +1.8
3,891,566 - MPMX20_03692 0.44 +1.7
3,891,569 + MPMX20_03692 0.44 +4.0
3,891,583 + MPMX20_03692 0.44 +1.3
3,891,620 + MPMX20_03692 0.46 +1.4
3,891,647 + MPMX20_03692 0.47 -1.7
3,891,683 - MPMX20_03692 0.49 -0.2
3,891,686 + MPMX20_03692 0.49 +1.6
3,891,691 + MPMX20_03692 0.49 +1.9
3,891,691 + MPMX20_03692 0.49 +0.6
3,891,691 + MPMX20_03692 0.49 +1.7
3,891,696 + MPMX20_03692 0.49 +1.7
3,891,841 + MPMX20_03692 0.56 +2.0
3,891,849 - MPMX20_03692 0.56 +2.3
3,891,924 + MPMX20_03692 0.60 +1.5
3,891,924 + MPMX20_03692 0.60 +1.9
3,891,924 + MPMX20_03692 0.60 -0.0
3,891,924 + MPMX20_03692 0.60 +0.4
3,891,978 - MPMX20_03692 0.62 +1.2
3,892,024 + MPMX20_03692 0.64 +1.0
3,892,074 - MPMX20_03692 0.66 +1.2
3,892,082 + MPMX20_03692 0.67 +0.6
3,892,082 + MPMX20_03692 0.67 +0.4
3,892,212 + MPMX20_03692 0.72 +1.1
3,892,224 + MPMX20_03692 0.73 +2.0
3,892,233 - MPMX20_03692 0.73 +0.6
3,892,255 + MPMX20_03692 0.74 +1.7
3,892,270 + MPMX20_03692 0.75 -0.2
3,892,278 - MPMX20_03692 0.75 +1.0
3,892,303 + MPMX20_03692 0.77 +0.7
3,892,347 - MPMX20_03692 0.78 -1.0
3,892,411 - MPMX20_03692 0.81 +1.5
3,892,529 - MPMX20_03692 0.87 +1.6
3,892,539 + MPMX20_03692 0.87 +1.9
3,892,581 - MPMX20_03692 0.89 +0.1
3,892,581 - MPMX20_03692 0.89 +1.5
3,892,610 - +1.7
3,892,677 + +0.8
3,892,762 + +1.2
3,892,790 + +1.1
3,892,839 - -1.5
3,892,849 - +0.1
3,892,895 + MPMX20_03693 0.11 -0.9
3,892,947 - MPMX20_03693 0.22 -1.8
3,892,995 + MPMX20_03693 0.33 -0.5
3,893,214 + MPMX20_03693 0.80 -1.5
3,893,386 + -0.8
3,893,386 + -1.2
3,893,386 + -0.8
3,893,421 + -1.2
3,893,425 - -0.5
3,893,425 - +0.4
3,893,429 - +1.0
3,893,475 - +0.3
3,893,514 + +0.8
3,893,802 + -3.3
3,893,802 + +0.1
3,893,802 + -0.2
3,893,810 - -2.7
3,893,810 - -0.7
3,893,810 - +0.1

Or see this region's nucleotide sequence